Here is a list of all namespace members with links to the namespace documentation for each member:
- a -
- A
: CDPL::Chem::AtomType
- ABORTED
: CDPL::ConfGen::ReturnCode
- Ac
: CDPL::Chem::AtomType
- Ac_6_3
: CDPL::ForceField::UFFAtomType
- addConformation()
: CDPL::Chem
- Ag
: CDPL::Chem::AtomType
- Ag_1_1
: CDPL::ForceField::UFFAtomType
- AGENT
: CDPL::Chem::ReactionRole
- AGENT_ALIGNMENT
: CDPL::Vis::ReactionProperty
, CDPL::Vis::ReactionPropertyDefault
- AGENT_LAYOUT
: CDPL::Vis::ReactionProperty
, CDPL::Vis::ReactionPropertyDefault
- AGENT_LAYOUT_DIRECTION
: CDPL::Vis::ReactionProperty
, CDPL::Vis::ReactionPropertyDefault
- AH
: CDPL::Chem::AtomType
- Al
: CDPL::Chem::AtomType
, CDPL::Chem::SybylAtomType
- Al_3
: CDPL::ForceField::UFFAtomType
- align3DCoordinates()
: CDPL::Chem
- alignConformations()
: CDPL::Chem
- ALIGNMENT
: CDPL::Vis::ControlParameter
, CDPL::Vis::ControlParameterDefault
- ALL
: CDPL::Chem::ReactionRole
, CDPL::ConfGen::NitrogenEnumerationMode
, CDPL::ForceField::InteractionType
, CDPL::Shape::AlignmentResultSelectionMode
- ALT_LOCATION_ID
: CDPL::Biomol::AtomProperty
- Am
: CDPL::Chem::AtomType
- Am_6_4
: CDPL::ForceField::UFFAtomType
- AMIDE
: CDPL::Chem::RECAPRuleID
, CDPL::Chem::SybylBondType
- AMIDE_C
: CDPL::Chem::RECAPAtomLabel
- AMIDE_IMIDIC_ACID
: CDPL::Chem::TautomerizationType
- AMIDE_N
: CDPL::Chem::RECAPAtomLabel
- AMINE
: CDPL::Chem::RECAPRuleID
- AMINE_C
: CDPL::Chem::RECAPAtomLabel
- AMINE_N
: CDPL::Chem::RECAPAtomLabel
- AMPAC
: CDPL::Chem::MOL2ChargeType
- ANGLE_BENDING
: CDPL::ForceField::InteractionType
- angleCos()
: CDPL::Math
- ANY
: CDPL::Chem::AtomType
- Any
: CDPL::Chem::SybylAtomType
- ANY_ORDER
: CDPL::Chem::BondMatchConstraint
- applyConformation()
: CDPL::Chem
- Ar
: CDPL::Chem::AtomType
- Ar_4_4
: CDPL::ForceField::UFFAtomType
- areInSameResidue()
: CDPL::Biomol
- AROMATIC
: CDPL::Chem::BondMatchConstraint
, CDPL::Chem::SybylBondType
, CDPL::Pharm::FeatureType
- AROMATIC_C_AROMATIC_C
: CDPL::Chem::RECAPRuleID
- AROMATIC_C_AROMATIC_C_C
: CDPL::Chem::RECAPAtomLabel
- AROMATIC_N_ALIPHATIC_C
: CDPL::Chem::RECAPRuleID
- AROMATIC_N_ALIPHATIC_C_C
: CDPL::Chem::RECAPAtomLabel
- AROMATIC_N_ALIPHATIC_C_N
: CDPL::Chem::RECAPAtomLabel
- AROMATIC_SUBSTRUCTURE
: CDPL::Chem::MolecularGraphProperty
- AROMATICITY
: CDPL::Chem::AtomMatchConstraint
, CDPL::Chem::AtomPropertyFlag
, CDPL::Chem::BondMatchConstraint
, CDPL::Chem::BondPropertyFlag
- AROMATICITY_FLAG
: CDPL::Chem::AtomProperty
, CDPL::Chem::BondProperty
- ARROW_COLOR
: CDPL::Vis::ReactionProperty
, CDPL::Vis::ReactionPropertyDefault
- ARROW_HEAD_LENGTH
: CDPL::Vis::ReactionProperty
, CDPL::Vis::ReactionPropertyDefault
- ARROW_HEAD_WIDTH
: CDPL::Vis::ReactionProperty
, CDPL::Vis::ReactionPropertyDefault
- ARROW_LENGTH
: CDPL::Vis::ReactionProperty
, CDPL::Vis::ReactionPropertyDefault
- ARROW_LINE_WIDTH
: CDPL::Vis::ReactionProperty
, CDPL::Vis::ReactionPropertyDefault
- ARROW_SHAFT_WIDTH
: CDPL::Vis::ReactionProperty
, CDPL::Vis::ReactionPropertyDefault
- ARROW_STYLE
: CDPL::Vis::ReactionProperty
, CDPL::Vis::ReactionPropertyDefault
- As
: CDPL::Chem::AtomType
- As_3_3
: CDPL::ForceField::UFFAtomType
- assignMMFF94AtomTypes()
: CDPL::ForceField
- assignMMFF94BondTypeIndices()
: CDPL::ForceField
- assignUFFAtomTypes()
: CDPL::ForceField
- ASYMMETRIC
: CDPL::Shape::SymmetryClass
- At
: CDPL::Chem::AtomType
, CDPL::ForceField::UFFAtomType
- Atom3DCoordinatesFunction
: CDPL::Chem
- ATOM_COLOR
: CDPL::Vis::ControlParameter
, CDPL::Vis::ControlParameterDefault
, CDPL::Vis::MolecularGraphProperty
, CDPL::Vis::MolecularGraphPropertyDefault
- ATOM_COLOR_TABLE
: CDPL::Vis::ControlParameter
, CDPL::Vis::ControlParameterDefault
, CDPL::Vis::MolecularGraphProperty
, CDPL::Vis::MolecularGraphPropertyDefault
- ATOM_CONFIGURATION_LABEL_FONT
: CDPL::Vis::ControlParameter
, CDPL::Vis::ControlParameterDefault
, CDPL::Vis::MolecularGraphProperty
, CDPL::Vis::MolecularGraphPropertyDefault
- ATOM_CONFIGURATION_LABEL_SIZE
: CDPL::Vis::ControlParameter
, CDPL::Vis::ControlParameterDefault
, CDPL::Vis::MolecularGraphProperty
, CDPL::Vis::MolecularGraphPropertyDefault
- ATOM_LABEL_FONT
: CDPL::Vis::ControlParameter
, CDPL::Vis::ControlParameterDefault
, CDPL::Vis::MolecularGraphProperty
, CDPL::Vis::MolecularGraphPropertyDefault
- ATOM_LABEL_MARGIN
: CDPL::Vis::ControlParameter
, CDPL::Vis::ControlParameterDefault
, CDPL::Vis::MolecularGraphProperty
, CDPL::Vis::MolecularGraphPropertyDefault
- ATOM_LABEL_SIZE
: CDPL::Vis::ControlParameter
, CDPL::Vis::ControlParameterDefault
, CDPL::Vis::MolecularGraphProperty
, CDPL::Vis::MolecularGraphPropertyDefault
- ATOM_MAPPING
: CDPL::Chem::ReactionMatchConstraint
, CDPL::Chem::ReactionProperty
- ATOM_MAPPING_ID
: CDPL::Chem::AtomProperty
, CDPL::Chem::AtomPropertyDefault
, CDPL::Chem::AtomPropertyFlag
- AtomCompareFunction
: CDPL::Chem
- AtomPredicate
: CDPL::Chem
- AtomPriorityFunction
: CDPL::Chem
- atomTypesMatch()
: CDPL::Chem
- Au
: CDPL::Chem::AtomType
- Au_4_3
: CDPL::ForceField::UFFAtomType
- AUTO
: CDPL::ConfGen::ConformerSamplingMode
, CDPL::ConfGen::StructureGenerationMode