Class Hierarchy

Go to the graphical class hierarchy

This inheritance list is sorted roughly, but not completely, alphabetically:

[detail level 123456]

CCDPL::Shape::AlignedColorTverskyScore
CCDPL::Shape::AlignedShapeTverskyScore
CCDPL::Shape::AlignedTotalOverlapTverskyScore
CCDPL::Shape::AlignedTverskyComboScore
CCDPL::Shape::AlignmentResult
CCDPL::ConfGen::TorsionRule::AngleEntry
CCDPL::Base::Any	A safe, type checked container for arbitrary data of variable type
CCDPL::Util::Array< ValueType >	A dynamic array class providing amortized constant time access to arbitrary elements
CCDPL::Util::Array< BitSet >
►CCDPL::Util::Array< MatchConstraint >
CCDPL::Chem::MatchConstraintList	MatchConstraintList
CCDPL::Util::Array< MMFF94AngleBendingInteraction >
CCDPL::Util::Array< MMFF94BondStretchingInteraction >
CCDPL::Util::Array< MMFF94ElectrostaticInteraction >
CCDPL::Util::Array< MMFF94OutOfPlaneBendingInteraction >
CCDPL::Util::Array< MMFF94StretchBendInteraction >
CCDPL::Util::Array< MMFF94TorsionInteraction >
CCDPL::Util::Array< MMFF94VanDerWaalsInteraction >
CCDPL::Util::Array< StereoDescriptor >
►CCDPL::Util::Array< StringDataBlockEntry >
CCDPL::Chem::StringDataBlock	An array of Chem::StringDataBlockEntry objects used to store the structure or reaction data block of a STRING SD- or RD-File data record (see [CTFILE])
►CCDPL::Util::Array< typename ValueType::SharedPointer >
CCDPL::Util::IndirectArray< ValueType, PointerType, NullPointerCheck >	A dynamic array class for the storage of object pointers with an indirected query interface
►CCDPL::Util::IndirectArray< ElectronSystem >
►CCDPL::Chem::ElectronSystemList	A data type for the storage of Chem::ElectronSystem objects
CCDPL::Chem::PiElectronSystemList	Implements the perception of all pi electron systems present in a molecule
►CCDPL::Util::IndirectArray< Fragment >
►CCDPL::Chem::FragmentList	A data type for the storage of Chem::Fragment objects
CCDPL::Biomol::ResidueList	Implements the extraction of residues in biological macromolecules
CCDPL::Chem::AromaticRingSet	Implements the perception of aromatic rings in a molecular graph
CCDPL::Chem::AromaticSSSRSubset	Implements the extraction of the aromatic rings in the SSSR of a molecular graph
CCDPL::Chem::CompleteRingSet	Implements the exhaustive perception of rings in a molecular graph
CCDPL::Chem::ComponentSet	Implements the perception of molecular graph components
CCDPL::Chem::ConnectedSubstructureSet	ConnectedSubstructureSet
CCDPL::Chem::SmallestSetOfSmallestRings	Implements the perception of the Smallest Set of Smallest Rings (SSSR) of a molecular graphs
CCDPL::ForceField::MMFF94AromaticSSSRSubset	Implements the extraction of all rings in the SSSR of a molecular graph that are aromatic according to MMFF94 conventions
►CCDPL::Util::IndirectArray< GaussianShape >
CCDPL::Shape::GaussianShapeSet
►CCDPL::Util::IndirectArray< MatchExpression< ObjType, void > >
►CCDPL::Chem::MatchExpressionList< ObjType, void >
CCDPL::Chem::ANDMatchExpressionList< ObjType, void >	ANDMatchExpressionList
CCDPL::Chem::ORMatchExpressionList< ObjType, void >	ORMatchExpressionList
►CCDPL::Util::IndirectArray< MatchExpression< ObjType1, void > >
CCDPL::Chem::MatchExpressionList< ObjType1, ObjType2 >	A container for the storage and evaluation of logical match expression lists
►CCDPL::Chem::MatchExpressionList< ObjType1, void >
CCDPL::Chem::ANDMatchExpressionList< ObjType1, ObjType2 >	ANDMatchExpressionList
CCDPL::Chem::ORMatchExpressionList< ObjType1, ObjType2 >	ORMatchExpressionList
►CCDPL::Util::Array< V >
CCDPL::Math::VectorArray< V >	An array for storing generic vector objects
CCDPL::Chem::Atom2DCoordinatesCalculator	Atom2DCoordinatesCalculator
CCDPL::Chem::Atom3DCoordinatesFunctor	Atom3DCoordinatesFunctor
CCDPL::Chem::AtomArray3DCoordinatesFunctor	AtomArray3DCoordinatesFunctor
CCDPL::Chem::AtomBondMapping	A data structure for the common storage of related atom to atom and bond to bond mappings
CCDPL::Chem::AtomConformer3DCoordinatesFunctor	AtomConformer3DCoordinatesFunctor
CCDPL::GRAIL::AtomDensityGridCalculator	AtomDensityGridCalculator
CCDPL::Chem::AtomDictionary	A global dictionary for the lookup of data associated with the atom types defined in namespace Chem::AtomType
CCDPL::MolProp::AtomHydrophobicityCalculator	AtomHydrophobicityCalculator
CCDPL::Descr::AutoCorrelation2DVectorCalculator	AutoCorrelation2DVectorCalculator
CCDPL::Descr::AutoCorrelation3DVectorCalculator< T >	AutoCorrelation3DVectorCalculator
►CCDPL::Descr::AutoCorrelation3DVectorCalculator< Chem::Atom >
CCDPL::Descr::AtomAutoCorrelation3DVectorCalculator	AtomAutoCorrelation3DVectorCalculator
►CCDPL::Descr::AutoCorrelation3DVectorCalculator< Pharm::Feature >
CCDPL::Descr::FeatureAutoCorrelation3DVectorCalculator	FeatureAutoCorrelation3DVectorCalculator
CCDPL::Chem::AutomorphismGroupSearch	AutomorphismGroupSearch
CCDPL::Descr::BCUTDescriptorCalculator	BCUTDescriptorCalculator
CCDPL::Chem::BemisMurckoAnalyzer	BemisMurckoAnalyzer
CCDPL::Math::BFGSMinimizer< VA, VT, FVT >	Fletcher's implementation of the BFGS method
CCDPL::Math::BFGSMinimizer< QuaternionTransformation >
CCDPL::GRAIL::BindingAffinityCalculator	BindingAffinityCalculator
►CCDPL::Chem::BondContainer	A common interface for data-structures that support a random access to stored Chem::Bond instances
►CCDPL::Chem::Atom	Atom
CCDPL::Chem::BasicAtom	BasicAtom
►CCDPL::Chem::MolecularGraph	MolecularGraph
►CCDPL::Chem::Fragment	Fragment
►CCDPL::Biomol::HierarchyViewNode	HierarchyViewNode
CCDPL::Biomol::HierarchyViewChain	HierarchyViewChain
CCDPL::Biomol::HierarchyViewFragment	HierarchyViewFragment
CCDPL::Biomol::HierarchyViewModel	HierarchyViewModel
CCDPL::Chem::AromaticSubstructure	Implements the perception of aromatic atoms and bonds in a molecular graph
CCDPL::Chem::CyclicSubstructure	Implements the perception of ring atoms and bonds in a molecular graph
►CCDPL::Chem::Molecule	Molecule
CCDPL::Chem::BasicMolecule	BasicMolecule
CCDPL::ConfGen::CanonicalFragment	CanonicalFragment
CCDPL::Chem::BondOrderCalculator	BondOrderCalculator
CCDPL::Chem::PatternBasedTautomerizationRule::BondOrderChange
CCDPL::Chem::BondStereoFlagCalculator	BondStereoFlagCalculator
CCDPL::Math::BoundedVector< T, N >
CCDPL::Util::BronKerboschAlgorithm	Implementation of the Bron-Kerbosch clique-detection algorithm [BKA]
CCDPL::Vis::Brush	Specifies the fill pattern and fill color of shapes
CCDPL::Descr::BurdenMatrixGenerator	BurdenMatrixGenerator
CCDPL::GRAIL::BuriednessGridCalculator	BuriednessGridCalculator
CCDPL::GRAIL::BuriednessScore	BuriednessScore
CCDPL::Vis::CairoPointer< T >	A smart pointer managing the lifetime of allocated Cairo data structures
CCDPL::Vis::CairoPointer< cairo_t >
CCDPL::Vis::CairoPointerTraits< T >
CCDPL::Vis::CairoPointerTraits< cairo_pattern_t >	Specialization of CairoPointerTraits for the object type cairo_pattern_t
CCDPL::Vis::CairoPointerTraits< cairo_surface_t >	Specialization of CairoPointerTraits for the object type cairo_surface_t
CCDPL::Vis::CairoPointerTraits< cairo_t >	Specialization of CairoPointerTraits for the object type cairo_t
CCDPL::Chem::CanonicalNumberingCalculator	CanonicalNumberingCalculator
CCDPL::Pharm::CationPiInteractionConstraint	CationPiInteractionConstraint
CCDPL::Chem::ChEMBLStandardizer	Implementation of the ChEMBL structure preprocessing pipeline
CCDPL::Chem::CIPConfigurationLabeler	CIPConfigurationLabeler
CCDPL::Chem::CIPPriorityCalculator	CIPPriorityCalculator
CCDPL::Descr::CircularFingerprintGenerator	CircularFingerprintGenerator
CCDPL::Vis::Color	Specifies a color in terms of its red, green and blue components and an alpha-channel for transparency
CCDPL::Shape::ColorTanimotoScore
CCDPL::Shape::ColorTverskyScore
CCDPL::Chem::CommonConnectedSubstructureSearch	CommonConnectedSubstructureSearch
CCDPL::Math::CommonType< T1, T2 >
CCDPL::Math::ComplexTraits< T >
►CCDPL::Math::ComplexTraits< std::complex< T > >
CCDPL::Math::TypeTraits< std::complex< T > >
CCDPL::Util::CompressionAlgoTraits< CompAlgo >
CCDPL::Util::CompressionAlgoTraits< BZIP2 >
CCDPL::Util::CompressionAlgoTraits< GZIP >
CCDPL::ConfGen::ConformerGenerator
CCDPL::ConfGen::ConformerGeneratorSettings
►CCDPL::Base::ControlParameterContainer	A class providing methods for the storage and lookup of control-parameter values
CCDPL::Base::ControlParameterList	A data structure for the storage and lookup of control-parameter values
►CCDPL::Base::DataIOBase	Provides infrastructure for the registration of I/O callback functions
CCDPL::Base::DataReader< T >	An interface for reading data objects of a given type from an arbitrary data source
CCDPL::Base::DataWriter< T >	An interface for writing data objects of a given type to an arbitrary data sink
►CCDPL::Base::DataReader< Chem::Molecule >
CCDPL::Pharm::PSDMoleculeReader	A reader for molecule data in the PSD-format of the CDPL
►CCDPL::Util::StreamDataReader< Chem::Molecule, CFLMoleculeReader >
CCDPL::ConfGen::CFLMoleculeReader	A reader for molecule data in the native I/O format of the CDPL
►CCDPL::Util::StreamDataReader< Chem::Molecule, MMTFMoleculeReader >
CCDPL::Biomol::MMTFMoleculeReader	A reader for molecule data in the Macromolecular Transmission Format (MMTF) [MMTF]
►CCDPL::Util::StreamDataReader< Chem::Molecule, PDBMoleculeReader >
CCDPL::Biomol::PDBMoleculeReader	A reader for molecule data in the Brookhaven Protein Data Bank (PDB) [PDB] format
►CCDPL::Base::DataReader< DataType >
CCDPL::Util::CompoundDataReader< DataType >	CompoundDataReader
CCDPL::Util::MultiFormatDataReader< DataType >	MultiFormatDataReader
►CCDPL::Util::StreamDataReader< DataType, ReaderImpl >	A helper class that implements Base::DataReader for std::istream based data readers
CCDPL::Chem::CDFMoleculeReader	A reader for molecule data in the native I/O format of the CDPL
CCDPL::Chem::INCHIMoleculeReader	A reader for molecule data in the IUPAC International Chemical Identifier (InChI) [INCHI] format
CCDPL::Chem::SMARTSReactionReader	A reader for reaction data in the Daylight SMARTS [SMARTS] format
CCDPL::Grid::CDFDRegularGridReader	A reader for spatial regular grid data in the native I/O format of the CDPL
CCDPL::Grid::CDFDRegularGridSetReader	A reader for spatial regular grid set data in the native I/O format of the CDPL
►CCDPL::Base::DataReader< DRegularGrid >
CCDPL::Util::StreamDataReader< DRegularGrid, CDFDRegularGridReader >
►CCDPL::Base::DataReader< DRegularGridSet >
CCDPL::Util::StreamDataReader< DRegularGridSet, CDFDRegularGridSetReader >
►CCDPL::Base::DataReader< Molecule >
CCDPL::Util::StreamDataReader< Molecule, CDFMoleculeReader >
CCDPL::Util::StreamDataReader< Molecule, INCHIMoleculeReader >
►CCDPL::Util::StreamDataReader< Molecule, JMEMoleculeReader >
CCDPL::Chem::JMEMoleculeReader	A reader for molecule data in the native I/O format of the JME Molecular Editor [JME] java applet
►CCDPL::Util::StreamDataReader< Molecule, MOL2MoleculeReader >
CCDPL::Chem::MOL2MoleculeReader
►CCDPL::Util::StreamDataReader< Molecule, MOLMoleculeReader >
CCDPL::Chem::MOLMoleculeReader	A reader for molecule data in the MDL Mol-File [CTFILE] format
►CCDPL::Util::StreamDataReader< Molecule, SDFMoleculeReader >
CCDPL::Chem::SDFMoleculeReader	A Reader for molecule data in the MDL SD-File [CTFILE] format
►CCDPL::Util::StreamDataReader< Molecule, SMARTSMoleculeReader >
CCDPL::Chem::SMARTSMoleculeReader	A reader for molecule data in the Daylight SMARTS [SMARTS] format
►CCDPL::Util::StreamDataReader< Molecule, SMILESMoleculeReader >
CCDPL::Chem::SMILESMoleculeReader	A reader for molecule data in the Daylight SMILES [SMILES] format
►CCDPL::Util::StreamDataReader< Molecule, XYZMoleculeReader >
CCDPL::Chem::XYZMoleculeReader
►CCDPL::Base::DataReader< Pharmacophore >
CCDPL::Pharm::PSDPharmacophoreReader	A reader for pharmacophore data in the PSD-format of the CDPL
►CCDPL::Util::StreamDataReader< Pharmacophore, CDFPharmacophoreReader >
CCDPL::Pharm::CDFPharmacophoreReader	A reader for pharmacophore data in the native I/O format of the CDPL
►CCDPL::Util::StreamDataReader< Pharmacophore, PMLPharmacophoreReader >
CCDPL::Pharm::PMLPharmacophoreReader	A reader for pharmacophore data in the native I/O format of LigandScout
►CCDPL::Base::DataReader< Reaction >
►CCDPL::Util::StreamDataReader< Reaction, CDFReactionReader >
CCDPL::Chem::CDFReactionReader	A reader for reaction data in the native I/O format of the CDPL
►CCDPL::Util::StreamDataReader< Reaction, JMEReactionReader >
CCDPL::Chem::JMEReactionReader	A reader for reaction data in the native I/O format of the JME Molecular Editor [JME] java applet
►CCDPL::Util::StreamDataReader< Reaction, RDFReactionReader >
CCDPL::Chem::RDFReactionReader	A reader for reaction data in the MDL RD-File [CTFILE] format
►CCDPL::Util::StreamDataReader< Reaction, RXNReactionReader >
CCDPL::Chem::RXNReactionReader	A reader for reaction data in the MDL Rxn-File [CTFILE] format
CCDPL::Util::StreamDataReader< Reaction, SMARTSReactionReader >
►CCDPL::Util::StreamDataReader< Reaction, SMILESReactionReader >
CCDPL::Chem::SMILESReactionReader	A reader for reaction data in the Daylight SMILES [SMILES] format
►CCDPL::Base::DataReader< typename ReaderImpl::DataType >
CCDPL::Util::CompressedDataReader< ReaderImpl, DecompStream, DataType >	CompressedDataReader
CCDPL::Util::FileDataReader< ReaderImpl, DataType >	FileDataReader
►CCDPL::Base::DataWriter< Chem::MolecularGraph >
CCDPL::Biomol::MMTFMolecularGraphWriter	A writer for molecular graph data in the Macromolecular Transmission Format (MMTF) [MMTF]
CCDPL::Biomol::PDBMolecularGraphWriter	A writer for molecular graph data in the Brookhaven Protein Data Bank (PDB) [PDB] format
CCDPL::Pharm::PSDMolecularGraphWriter	A writer for molecular graph data in the PSD-format of the CDPL
CCDPL::Vis::PDFMolecularGraphWriter	Creates 2D structure diagrams of molecular graphs in the Portable Document Format (PDF) [WPDF]
CCDPL::Vis::PNGMolecularGraphWriter	Creates 2D structure diagrams of molecular graphs in the Portable Network Graphics (PNG) [WPNG] format
CCDPL::Vis::PSMolecularGraphWriter	Creates 2D structure diagrams of molecular graphs in the PostScript (PS) [WPS] format
CCDPL::Vis::SVGMolecularGraphWriter	Creates 2D structure diagrams of molecular graphs in the Scalable Vector Graphics (SVG) [WSVG] format
►CCDPL::Base::DataWriter< Chem::Reaction >
CCDPL::Vis::PDFReactionWriter	Creates 2D depictions of chemical reactions in the Portable Document Format (PDF) [WPDF]
CCDPL::Vis::PNGReactionWriter	Creates 2D depictions of chemical reactions in the Portable Network Graphics (PNG) [WPNG] format
CCDPL::Vis::PSReactionWriter	Creates 2D depictions of chemical reactions in the PostScript (PS) [WPS] format
CCDPL::Vis::SVGReactionWriter	Creates 2D depictions of chemical reactions in the Scalable Vector Graphics (SVG) [WSVG] format
►CCDPL::Base::DataWriter< DataType >
CCDPL::Util::MultiFormatDataWriter< DataType >	MultiFormatDataWriter
►CCDPL::Base::DataWriter< DRegularGrid >
CCDPL::Grid::CDFDRegularGridWriter	A writer for spatial regular grid data in the native I/O format of the CDPL
►CCDPL::Base::DataWriter< DRegularGridSet >
CCDPL::Grid::CDFDRegularGridSetWriter	A writer for spatial regular grid set data in the native I/O format of the CDPL
►CCDPL::Base::DataWriter< FeatureContainer >
CCDPL::Pharm::CDFFeatureContainerWriter	A writer for feature container data in the native I/O format of the CDPL
CCDPL::Pharm::PMLFeatureContainerWriter	A writer for feature container data in the native I/O format of LigandScout
►CCDPL::Base::DataWriter< MolecularGraph >
CCDPL::Chem::CDFMolecularGraphWriter	A writer for molecular graph data in the native I/O format of the CDPL
CCDPL::Chem::INCHIMolecularGraphWriter	A writer for molecular graph data in the IUPAC International Chemical Identifier (InChI) [INCHI] format
CCDPL::Chem::JMEMolecularGraphWriter	A writer for molecular graph data in the native I/O format of the JME Molecular Editor [JME] java applet
CCDPL::Chem::MOL2MolecularGraphWriter
CCDPL::Chem::MOLMolecularGraphWriter	A writer for molecular graph data in the MDL Mol-File [CTFILE] format
CCDPL::Chem::SDFMolecularGraphWriter	A writer for molecular graph data in the MDL Mol-File [CTFILE] format
CCDPL::Chem::SMARTSMolecularGraphWriter	A writer for molecular graph data in the Daylight SMARTS [SMARTS] format
CCDPL::Chem::SMILESMolecularGraphWriter	A writer for molecular graph data in the Daylight SMILES [SMILES] format
CCDPL::Chem::XYZMolecularGraphWriter
►CCDPL::Base::DataWriter< Reaction >
CCDPL::Chem::CDFReactionWriter	A writer for molecular graph data in the native I/O format of the CDPL
CCDPL::Chem::JMEReactionWriter	A writer for reaction data in the native I/O format of the JME Molecular Editor [JME] java applet
CCDPL::Chem::RDFReactionWriter	A writer for reaction data in the MDL RD-File [CTFILE] format
CCDPL::Chem::RXNReactionWriter	A writer for reaction data in the MDL Rxn-File [CTFILE] format
CCDPL::Chem::SMARTSReactionWriter	A writer for reaction data in the Daylight SMARTS [SMARTS] format
CCDPL::Chem::SMILESReactionWriter	A writer for reaction data in the Daylight SMILES [SMILES] format
►CCDPL::Base::DataWriter< typename WriterImpl::DataType >
CCDPL::Util::CompressedDataWriter< WriterImpl, CompStream, DataType >	CompressedDataWriter
CCDPL::Util::FileDataWriter< WriterImpl, DataType >	FileDataWriter
►CCDPL::Vis::View2D	The abstract base of classes implementing the 2D visualization of data objects
CCDPL::Vis::ReactionView2D	Implements the 2D visualization of chemical reactions
CCDPL::Vis::StructureView2D	Implements the 2D visualization of chemical structures
CCDPL::Math::CVector< T, N >
CCDPL::Base::DataFormat	Provides meta-information about a particular data storage format
CCDPL::Base::DataInputHandler< T >	A factory interface providing methods for the creation of Base::DataReader instances handling a particular object type and storage format
►CCDPL::Base::DataInputHandler< Chem::Molecule >
CCDPL::Pharm::PSDMoleculeInputHandler	A handler for the input of molecule data in the PSD-format of the CDPL
►CCDPL::Base::DataInputHandler< Pharmacophore >
CCDPL::Pharm::PSDPharmacophoreInputHandler	A handler for the input of pharmacophore data in the PSD-format of the CDPL
►CCDPL::Base::DataInputHandler< typename ReaderImpl::DataType >
CCDPL::Util::DefaultDataInputHandler< ReaderImpl, Format, DataType >	DefaultDataInputHandler
CCDPL::Base::DataIOManager< T >	A singleton class that serves as a global registry for Base::DataInputHandler and Base::DataOutputHandler implementation instances
CCDPL::Base::DataOutputHandler< T >	A factory interface providing methods for the creation of Base::DataWriter instances handling a particular object type and storage format
►CCDPL::Base::DataOutputHandler< Chem::MolecularGraph >
CCDPL::Pharm::PSDMolecularGraphOutputHandler	A handler for the output of molecular graph dara in the PSD-format of the CDPL
►CCDPL::Base::DataOutputHandler< typename WriterImpl::DataType >
CCDPL::Util::DefaultDataOutputHandler< WriterImpl, FORMAT, DataType >	DefaultDataOutputHandler
CCDPL::Descr::PathFingerprintGenerator::DefAtomDescriptorFunctor	The default functor for the generation of atom descriptors
CCDPL::Chem::HashCodeCalculator::DefAtomHashSeedFunctor	The default functor for the generation of atom hash seeds
CCDPL::Descr::CircularFingerprintGenerator::DefAtomIdentifierFunctor	The functor for the generation of ECFP atom identifiers
CCDPL::Util::ObjectPool< T >::DefaultConstructor
CCDPL::Util::ObjectStack< T >::DefaultConstructor
CCDPL::Util::ObjectPool< T >::DefaultDestructor
CCDPL::Descr::PathFingerprintGenerator::DefBondDescriptorFunctor	The default functor for the generation of bond descriptors
CCDPL::Chem::HashCodeCalculator::DefBondHashSeedFunctor	The default functor for the generation of bond hash seeds
CCDPL::Descr::CircularFingerprintGenerator::DefBondIdentifierFunctor	The default functor for the generation of bond identifiers
CCDPL::Util::Dereferencer< ArgType, ResType >	An unary functor for the dereferenciation of pointers without null pointer checking
CCDPL::ConfGen::DGConstraintGenerator
►CCDPL::ConfGen::DGConstraintGeneratorSettings
CCDPL::ConfGen::DGStructureGeneratorSettings
CCDPL::Util::DGCoordinatesGeneratorBase< Dim, T, Derived >	Base for classes dedicated to the generation of coordinates that fulfill user-provided point distance (and volume) constraints [ASPE]
►CCDPL::Util::DGCoordinatesGeneratorBase< 3, T, DGCoordinatesGenerator< 3, T > >
CCDPL::Util::DGCoordinatesGenerator< 3, T >	Specialized implementation for the generation of 3D coordinates that fulfill user-provided point distance and volume constraints [ASPE]
►CCDPL::Util::DGCoordinatesGeneratorBase< Dim, double, DGCoordinatesGenerator< Dim, double > >
CCDPL::Util::DGCoordinatesGenerator< 2, double >
►CCDPL::Util::DGCoordinatesGeneratorBase< Dim, T, DGCoordinatesGenerator< Dim, T > >
CCDPL::Util::DGCoordinatesGenerator< Dim, T >	Generic implementation for generation of coordinates that fulfill user-provided point distance constraints [ASPE]
CCDPL::ConfGen::DGStructureGenerator
CCDPL::Math::DirectAssignmentProxy< C >
CCDPL::Util::DGCoordinatesGeneratorBase< Dim, T, Derived >::DistanceConstraint
CCDPL::ForceField::ElasticPotential
CCDPL::Shape::FastGaussianShapeAlignment::ShapeData::Element
CCDPL::Shape::GaussianShape::Element
►CCDPL::Chem::Entity3DContainer	A common interface for data-structures that support a random access to stored Chem::Entity3D instances
►CCDPL::Chem::AtomContainer	A common interface for data-structures that support a random access to stored Chem::Atom instances
CCDPL::Chem::Atom	Atom
►CCDPL::Chem::Bond	Bond
CCDPL::Chem::BasicBond	BasicBond
CCDPL::Chem::ElectronSystem	Describes an electron system of a molecule in terms of involved atoms and their electron contributions
CCDPL::Chem::MolecularGraph	MolecularGraph
►CCDPL::Pharm::FeatureContainer	FeatureContainer
CCDPL::Pharm::FeatureSet	FeatureSet
►CCDPL::Pharm::Pharmacophore	Pharmacophore
CCDPL::Pharm::BasicPharmacophore	BasicPharmacophore
CCDPL::Chem::Entity3DCoordinatesFunctor	Entity3DCoordinatesFunctor
CCDPL::ForceField::MMFF94AngleBendingParameterTable::Entry
CCDPL::ForceField::MMFF94AromaticAtomTypeDefinitionTable::Entry
CCDPL::ForceField::MMFF94AtomTypePropertyTable::Entry
CCDPL::ForceField::MMFF94BondChargeIncrementTable::Entry
CCDPL::ForceField::MMFF94BondStretchingParameterTable::Entry
CCDPL::ForceField::MMFF94BondStretchingRuleParameterTable::Entry
CCDPL::ForceField::MMFF94DefaultStretchBendParameterTable::Entry
CCDPL::ForceField::MMFF94FormalAtomChargeDefinitionTable::Entry
CCDPL::Chem::AtomDictionary::Entry
CCDPL::ForceField::MMFF94OutOfPlaneBendingParameterTable::Entry
CCDPL::ForceField::MMFF94PartialBondChargeIncrementTable::Entry
CCDPL::ForceField::MMFF94PrimaryToParameterAtomTypeMap::Entry
CCDPL::ForceField::MMFF94StretchBendParameterTable::Entry
CCDPL::ForceField::MMFF94SymbolicAtomTypePatternTable::Entry
CCDPL::ForceField::MMFF94TorsionParameterTable::Entry
CCDPL::ForceField::MMFF94VanDerWaalsParameterTable::Entry
CCDPL::ForceField::UFFAtomTypePropertyTable::Entry
CCDPL::Biomol::ResidueDictionary::Entry
►Cstd::exception	STL class
►CCDPL::Base::Exception	The root of the CDPL exception hierarchy
CCDPL::Base::BadCast	Thrown to indicate that a cast or conversion from a given source type to a requested target type is not possible
CCDPL::Base::ItemNotFound	Thrown to indicate that some requested data item could not be found
►CCDPL::Base::OperationFailed	Thrown to indicate that some requested operation has failed (e.g. due to unfulfilled preconditions or other errors)
CCDPL::Base::CalculationFailed	Thrown to indicate that some requested calculation has failed
CCDPL::Base::IOError	Thrown to indicate that an I/O operation has failed because of physical (e.g. broken pipe) or logical (e.g. invalid file format) errors
►CCDPL::Base::ValueError	Thrown to indicate errors caused by some invalid value
CCDPL::Base::NullPointerException	Thrown when an operation requires or expects a valid pointer but a null pointer was provided
►CCDPL::Base::RangeError	Thrown to indicate that a value is out of range
CCDPL::Base::IndexError	Thrown to indicate that an index is out of range
CCDPL::Base::SizeError	Thrown to indicate that the size of a (multidimensional) array is not correct
►CCDPL::ForceField::Error
CCDPL::ForceField::ParameterizationFailed
CCDPL::Chem::FragmentGenerator::ExcludePattern
►CCDPL::Math::Expression< E >
CCDPL::Math::GridExpression< E >
CCDPL::Math::MatrixExpression< E >
CCDPL::Math::QuaternionExpression< E >
CCDPL::Math::VectorExpression< E >
►CCDPL::Math::Expression< BoundedMatrix< T, M, N > >
►CCDPL::Math::MatrixExpression< BoundedMatrix< T, M, N > >
►CCDPL::Math::MatrixContainer< BoundedMatrix< T, M, N > >
CCDPL::Math::BoundedMatrix< T, M, N >
►CCDPL::Math::Expression< C >
►CCDPL::Math::GridExpression< C >
CCDPL::Math::GridContainer< C >
►CCDPL::Math::MatrixExpression< C >
CCDPL::Math::MatrixContainer< C >
►CCDPL::Math::QuaternionExpression< C >
CCDPL::Math::QuaternionContainer< C >
►CCDPL::Math::VectorExpression< C >
CCDPL::Math::VectorContainer< C >
►CCDPL::Math::Expression< CMatrix< T, M, N > >
►CCDPL::Math::MatrixExpression< CMatrix< T, M, N > >
►CCDPL::Math::MatrixContainer< CMatrix< T, M, N > >
CCDPL::Math::CMatrix< T, M, N >
►CCDPL::Math::Expression< CMatrix< typename TypeTraits< T >::RealType, M, N > >
►CCDPL::Math::MatrixExpression< CMatrix< typename TypeTraits< T >::RealType, M, N > >
►CCDPL::Math::MatrixContainer< CMatrix< typename TypeTraits< T >::RealType, M, N > >
CCDPL::Math::CMatrix< typename TypeTraits< T >::RealType, 4, 4 >
►CCDPL::Math::Expression< Grid< T, std::vector< T > > >
►CCDPL::Math::GridExpression< Grid< T, std::vector< T > > >
►CCDPL::Math::GridContainer< Grid< T, std::vector< T > > >
CCDPL::Math::Grid< T, A >
CCDPL::Math::Grid< T >
►CCDPL::Math::Expression< GridBinary1< E1, E2, F > >
►CCDPL::Math::GridExpression< GridBinary1< E1, E2, F > >
CCDPL::Math::GridBinary1< E1, E2, F >
►CCDPL::Math::Expression< GridReference< G > >
►CCDPL::Math::GridExpression< GridReference< G > >
CCDPL::Math::GridReference< G >
►CCDPL::Math::Expression< GridUnary< E, F > >
►CCDPL::Math::GridExpression< GridUnary< E, F > >
CCDPL::Math::GridUnary< E, F >
►CCDPL::Math::Expression< HomogenousCoordsAdapter< V > >
►CCDPL::Math::VectorExpression< HomogenousCoordsAdapter< V > >
CCDPL::Math::HomogenousCoordsAdapter< V >
►CCDPL::Math::Expression< IdentityMatrix< T > >
►CCDPL::Math::MatrixExpression< IdentityMatrix< T > >
►CCDPL::Math::MatrixContainer< IdentityMatrix< T > >
CCDPL::Math::IdentityMatrix< T >
►CCDPL::Math::Expression< InitListMatrix< T > >
►CCDPL::Math::MatrixExpression< InitListMatrix< T > >
►CCDPL::Math::MatrixContainer< InitListMatrix< T > >
CCDPL::Math::InitListMatrix< T >
►CCDPL::Math::Expression< InitListVector< T > >
►CCDPL::Math::VectorExpression< InitListVector< T > >
►CCDPL::Math::VectorContainer< InitListVector< T > >
CCDPL::Math::InitListVector< T >
►CCDPL::Math::Expression< Matrix1VectorBinary< E1, E2, F > >
►CCDPL::Math::VectorExpression< Matrix1VectorBinary< E1, E2, F > >
CCDPL::Math::Matrix1VectorBinary< E1, E2, F >
►CCDPL::Math::Expression< Matrix2VectorBinary< E1, E2, F > >
►CCDPL::Math::VectorExpression< Matrix2VectorBinary< E1, E2, F > >
CCDPL::Math::Matrix2VectorBinary< E1, E2, F >
►CCDPL::Math::Expression< MatrixBinary1< E1, E2, F > >
►CCDPL::Math::MatrixExpression< MatrixBinary1< E1, E2, F > >
CCDPL::Math::MatrixBinary1< E1, E2, F >
►CCDPL::Math::Expression< MatrixBinary2< E1, E2, F > >
►CCDPL::Math::MatrixExpression< MatrixBinary2< E1, E2, F > >
CCDPL::Math::MatrixBinary2< E1, E2, F >
►CCDPL::Math::Expression< MatrixColumn< M > >
►CCDPL::Math::VectorExpression< MatrixColumn< M > >
CCDPL::Math::MatrixColumn< M >
►CCDPL::Math::Expression< MatrixRange< M > >
►CCDPL::Math::MatrixExpression< MatrixRange< M > >
CCDPL::Math::MatrixRange< M >
►CCDPL::Math::Expression< MatrixRow< M > >
►CCDPL::Math::VectorExpression< MatrixRow< M > >
CCDPL::Math::MatrixRow< M >
►CCDPL::Math::Expression< MatrixSlice< M > >
►CCDPL::Math::MatrixExpression< MatrixSlice< M > >
CCDPL::Math::MatrixSlice< M >
►CCDPL::Math::Expression< MatrixTranspose< M > >
►CCDPL::Math::MatrixExpression< MatrixTranspose< M > >
CCDPL::Math::MatrixTranspose< M >
►CCDPL::Math::Expression< MatrixUnary< E, F > >
►CCDPL::Math::MatrixExpression< MatrixUnary< E, F > >
CCDPL::Math::MatrixUnary< E, F >
►CCDPL::Math::Expression< MatrixVectorArrayAdapter >
CCDPL::Math::MatrixExpression< MatrixVectorArrayAdapter >
►CCDPL::Math::Expression< Quaternion< T > >
►CCDPL::Math::QuaternionExpression< Quaternion< T > >
►CCDPL::Math::QuaternionContainer< Quaternion< T > >
CCDPL::Math::Quaternion< T >
►CCDPL::Math::Expression< QuaternionBinary1< E1, E2, F > >
►CCDPL::Math::QuaternionExpression< QuaternionBinary1< E1, E2, F > >
CCDPL::Math::QuaternionBinary1< E1, E2, F >
►CCDPL::Math::Expression< QuaternionBinary2< E1, E2, F > >
►CCDPL::Math::QuaternionExpression< QuaternionBinary2< E1, E2, F > >
CCDPL::Math::QuaternionBinary2< E1, E2, F >
►CCDPL::Math::Expression< QuaternionReference< Q > >
►CCDPL::Math::QuaternionExpression< QuaternionReference< Q > >
CCDPL::Math::QuaternionReference< Q >
►CCDPL::Math::Expression< QuaternionUnary1< E, F > >
►CCDPL::Math::QuaternionExpression< QuaternionUnary1< E, F > >
CCDPL::Math::QuaternionUnary1< E, F >
►CCDPL::Math::Expression< QuaternionUnary2< E, F > >
►CCDPL::Math::QuaternionExpression< QuaternionUnary2< E, F > >
CCDPL::Math::QuaternionUnary2< E, F >
►CCDPL::Math::Expression< QuaternionVectorAdapter< Q > >
►CCDPL::Math::VectorExpression< QuaternionVectorAdapter< Q > >
CCDPL::Math::QuaternionVectorAdapter< Q >
►CCDPL::Math::Expression< QuaternionVectorBinary< E1, E2, F > >
►CCDPL::Math::VectorExpression< QuaternionVectorBinary< E1, E2, F > >
CCDPL::Math::QuaternionVectorBinary< E1, E2, F >
►CCDPL::Math::Expression< RealQuaternion< T > >
►CCDPL::Math::QuaternionExpression< RealQuaternion< T > >
►CCDPL::Math::QuaternionContainer< RealQuaternion< T > >
CCDPL::Math::RealQuaternion< T >
►CCDPL::Math::Expression< RegularSpatialGrid< T, typename TypeTraits< T >::RealType, Grid< T >, CMatrix< typename TypeTraits< T >::RealType, 4, 4 > > >
►CCDPL::Math::GridExpression< RegularSpatialGrid< T, typename TypeTraits< T >::RealType, Grid< T >, CMatrix< typename TypeTraits< T >::RealType, 4, 4 > > >
CCDPL::Math::RegularSpatialGrid< T, C, GD, XF >
►CCDPL::Math::Expression< RotationMatrix< T > >
►CCDPL::Math::MatrixExpression< RotationMatrix< T > >
►CCDPL::Math::MatrixContainer< RotationMatrix< T > >
CCDPL::Math::RotationMatrix< T >
►CCDPL::Math::Expression< Scalar13QuaternionTernary< E1, E2, E3, F > >
►CCDPL::Math::QuaternionExpression< Scalar13QuaternionTernary< E1, E2, E3, F > >
CCDPL::Math::Scalar13QuaternionTernary< E1, E2, E3, F >
►CCDPL::Math::Expression< Scalar1GridBinary< E1, E2, F > >
►CCDPL::Math::GridExpression< Scalar1GridBinary< E1, E2, F > >
CCDPL::Math::Scalar1GridBinary< E1, E2, F >
►CCDPL::Math::Expression< Scalar1MatrixBinary< E1, E2, F > >
►CCDPL::Math::MatrixExpression< Scalar1MatrixBinary< E1, E2, F > >
CCDPL::Math::Scalar1MatrixBinary< E1, E2, F >
►CCDPL::Math::Expression< Scalar1QuaternionBinary1< E1, E2, F > >
►CCDPL::Math::QuaternionExpression< Scalar1QuaternionBinary1< E1, E2, F > >
CCDPL::Math::Scalar1QuaternionBinary1< E1, E2, F >
►CCDPL::Math::Expression< Scalar1QuaternionBinary2< E1, E2, F > >
►CCDPL::Math::QuaternionExpression< Scalar1QuaternionBinary2< E1, E2, F > >
CCDPL::Math::Scalar1QuaternionBinary2< E1, E2, F >
►CCDPL::Math::Expression< Scalar1VectorBinary< E1, E2, F > >
►CCDPL::Math::VectorExpression< Scalar1VectorBinary< E1, E2, F > >
CCDPL::Math::Scalar1VectorBinary< E1, E2, F >
►CCDPL::Math::Expression< Scalar2GridBinary< E1, E2, F > >
►CCDPL::Math::GridExpression< Scalar2GridBinary< E1, E2, F > >
CCDPL::Math::Scalar2GridBinary< E1, E2, F >
►CCDPL::Math::Expression< Scalar2MatrixBinary< E1, E2, F > >
►CCDPL::Math::MatrixExpression< Scalar2MatrixBinary< E1, E2, F > >
CCDPL::Math::Scalar2MatrixBinary< E1, E2, F >
►CCDPL::Math::Expression< Scalar2QuaternionBinary1< E1, E2, F > >
►CCDPL::Math::QuaternionExpression< Scalar2QuaternionBinary1< E1, E2, F > >
CCDPL::Math::Scalar2QuaternionBinary1< E1, E2, F >
►CCDPL::Math::Expression< Scalar2QuaternionBinary2< E1, E2, F > >
►CCDPL::Math::QuaternionExpression< Scalar2QuaternionBinary2< E1, E2, F > >
CCDPL::Math::Scalar2QuaternionBinary2< E1, E2, F >
►CCDPL::Math::Expression< Scalar2VectorBinary< E1, E2, F > >
►CCDPL::Math::VectorExpression< Scalar2VectorBinary< E1, E2, F > >
CCDPL::Math::Scalar2VectorBinary< E1, E2, F >
►CCDPL::Math::Expression< Scalar3QuaternionTernary< E1, E2, E3, F > >
►CCDPL::Math::QuaternionExpression< Scalar3QuaternionTernary< E1, E2, E3, F > >
CCDPL::Math::Scalar3QuaternionTernary< E1, E2, E3, F >
►CCDPL::Math::Expression< ScalarGrid< T > >
►CCDPL::Math::GridExpression< ScalarGrid< T > >
►CCDPL::Math::GridContainer< ScalarGrid< T > >
CCDPL::Math::ScalarGrid< T >
►CCDPL::Math::Expression< ScalarMatrix< T > >
►CCDPL::Math::MatrixExpression< ScalarMatrix< T > >
►CCDPL::Math::MatrixContainer< ScalarMatrix< T > >
CCDPL::Math::ScalarMatrix< T >
►CCDPL::Math::Expression< ScalarVector< T > >
►CCDPL::Math::VectorExpression< ScalarVector< T > >
►CCDPL::Math::VectorContainer< ScalarVector< T > >
CCDPL::Math::ScalarVector< T >
►CCDPL::Math::Expression< ScalingMatrix< T > >
►CCDPL::Math::MatrixExpression< ScalingMatrix< T > >
►CCDPL::Math::MatrixContainer< ScalingMatrix< T > >
CCDPL::Math::ScalingMatrix< T >
►CCDPL::Math::Expression< SparseMatrix< T, std::unordered_map< std::uint64_t, T > > >
►CCDPL::Math::MatrixExpression< SparseMatrix< T, std::unordered_map< std::uint64_t, T > > >
►CCDPL::Math::MatrixContainer< SparseMatrix< T, std::unordered_map< std::uint64_t, T > > >
CCDPL::Math::SparseMatrix< T, A >
►CCDPL::Math::Expression< SparseVector< T, std::unordered_map< std::size_t, T > > >
►CCDPL::Math::VectorExpression< SparseVector< T, std::unordered_map< std::size_t, T > > >
►CCDPL::Math::VectorContainer< SparseVector< T, std::unordered_map< std::size_t, T > > >
CCDPL::Math::SparseVector< T, A >
►CCDPL::Math::Expression< TranslationMatrix< T > >
►CCDPL::Math::MatrixExpression< TranslationMatrix< T > >
►CCDPL::Math::MatrixContainer< TranslationMatrix< T > >
CCDPL::Math::TranslationMatrix< T >
►CCDPL::Math::Expression< TriangularAdapter< M, Tri > >
►CCDPL::Math::MatrixExpression< TriangularAdapter< M, Tri > >
CCDPL::Math::TriangularAdapter< M, Tri >
►CCDPL::Math::Expression< UnitVector< T > >
►CCDPL::Math::VectorExpression< UnitVector< T > >
►CCDPL::Math::VectorContainer< UnitVector< T > >
CCDPL::Math::UnitVector< T >
►CCDPL::Math::Expression< VectorBinary1< E1, E2, F > >
►CCDPL::Math::VectorExpression< VectorBinary1< E1, E2, F > >
CCDPL::Math::VectorBinary1< E1, E2, F >
►CCDPL::Math::Expression< VectorBinary2< E1, E2, F > >
►CCDPL::Math::VectorExpression< VectorBinary2< E1, E2, F > >
CCDPL::Math::VectorBinary2< E1, E2, F >
►CCDPL::Math::Expression< VectorMatrixBinary< E1, E2, F > >
►CCDPL::Math::MatrixExpression< VectorMatrixBinary< E1, E2, F > >
CCDPL::Math::VectorMatrixBinary< E1, E2, F >
►CCDPL::Math::Expression< VectorMatrixUnary< E, F > >
►CCDPL::Math::MatrixExpression< VectorMatrixUnary< E, F > >
CCDPL::Math::VectorMatrixUnary< E, F >
►CCDPL::Math::Expression< VectorQuaternionAdapter< V > >
►CCDPL::Math::QuaternionExpression< VectorQuaternionAdapter< V > >
CCDPL::Math::VectorQuaternionAdapter< V >
►CCDPL::Math::Expression< VectorRange< V > >
►CCDPL::Math::VectorExpression< VectorRange< V > >
CCDPL::Math::VectorRange< V >
►CCDPL::Math::Expression< VectorReference< V > >
►CCDPL::Math::VectorExpression< VectorReference< V > >
CCDPL::Math::VectorReference< V >
►CCDPL::Math::Expression< VectorSlice< V > >
►CCDPL::Math::VectorExpression< VectorSlice< V > >
CCDPL::Math::VectorSlice< V >
►CCDPL::Math::Expression< VectorUnary< E, F > >
►CCDPL::Math::VectorExpression< VectorUnary< E, F > >
CCDPL::Math::VectorUnary< E, F >
►CCDPL::Math::Expression< ZeroGrid< T > >
►CCDPL::Math::GridExpression< ZeroGrid< T > >
►CCDPL::Math::GridContainer< ZeroGrid< T > >
CCDPL::Math::ZeroGrid< T >
►CCDPL::Math::Expression< ZeroMatrix< T > >
►CCDPL::Math::MatrixExpression< ZeroMatrix< T > >
►CCDPL::Math::MatrixContainer< ZeroMatrix< T > >
CCDPL::Math::ZeroMatrix< T >
►CCDPL::Math::Expression< ZeroVector< T > >
►CCDPL::Math::VectorExpression< ZeroVector< T > >
►CCDPL::Math::VectorContainer< ZeroVector< T > >
CCDPL::Math::ZeroVector< T >
CCDPL::Shape::FastGaussianShapeAlignment
►CCDPL::Pharm::FeatureDistanceConstraint	FeatureDistanceConstraint
CCDPL::Pharm::HydrophobicInteractionConstraint	HydrophobicInteractionConstraint
CCDPL::Pharm::IonicInteractionConstraint	IonicInteractionConstraint
►CCDPL::Pharm::FeatureGenerator	FeatureGenerator
►CCDPL::Pharm::PatternBasedFeatureGenerator	PatternBasedFeatureGenerator
CCDPL::Pharm::AromaticFeatureGenerator	AromaticFeatureGenerator
CCDPL::Pharm::HBondAcceptorFeatureGenerator	HBondAcceptorFeatureGenerator
CCDPL::Pharm::HBondDonorFeatureGenerator	HBondDonorFeatureGenerator
CCDPL::Pharm::HydrophobicAtomFeatureGenerator	HydrophobicAtomFeatureGenerator
CCDPL::Pharm::HydrophobicFeatureGenerator	HydrophobicFeatureGenerator
CCDPL::Pharm::NegIonizableFeatureGenerator	NegIonizableFeatureGenerator
CCDPL::Pharm::PosIonizableFeatureGenerator	PosIonizableFeatureGenerator
CCDPL::Pharm::XBondAcceptorFeatureGenerator	XBondAcceptorFeatureGenerator
CCDPL::Pharm::XBondDonorFeatureGenerator	XBondDonorFeatureGenerator
CCDPL::Pharm::FeatureGeometryMatchFunctor	FeatureGeometryMatchFunctor
►CCDPL::Pharm::FeatureInteractionScore	FeatureInteractionScore
CCDPL::Pharm::CationPiInteractionScore	CationPiInteractionScore
►CCDPL::Pharm::FeatureDistanceScore	FeatureDistanceScore
CCDPL::Pharm::HydrophobicInteractionScore	HydrophobicInteractionScore
CCDPL::Pharm::IonicInteractionScore	IonicInteractionScore
CCDPL::Pharm::FeatureInteractionScoreCombiner	FeatureInteractionScoreCombiner
CCDPL::Pharm::HBondingInteractionScore	HBondingInteractionScore
CCDPL::Pharm::OrthogonalPiPiInteractionScore	OrthogonalPiPiInteractionScore
CCDPL::Pharm::ParallelPiPiInteractionScore	ParallelPiPiInteractionScore
CCDPL::Pharm::XBondingInteractionScore	XBondingInteractionScore
CCDPL::GRAIL::FeatureInteractionScoreGridCalculator	FeatureInteractionScoreGridCalculator
CCDPL::Pharm::FeaturePairDistanceMatchFunctor	FeaturePairDistanceMatchFunctor
CCDPL::Pharm::FeaturePositionMatchFunctor	FeaturePositionMatchFunctor
CCDPL::Pharm::FeatureTypeMatchFunctor	FeatureTypeMatchFunctor
CCDPL::Util::FileRemover
CCDPL::Pharm::FileScreeningHitCollector	FileScreeningHitCollector
CCDPL::Vis::Font	Specifies a font for drawing text
►CCDPL::Vis::FontMetrics	An interface class with methods that provide information about the metrics of a font
CCDPL::Vis::CairoFontMetrics	Implements the FontMetrics interface for the Cairo rendering backend
CCDPL::Vis::QtFontMetrics	Implements the FontMetrics interface for the Qt rendering backend
CCDPL::ConfGen::FragmentAssembler
CCDPL::ConfGen::FragmentAssemblerSettings
CCDPL::Chem::FragmentGenerator::FragmentationRule
CCDPL::ConfGen::FragmentConformerGenerator
CCDPL::ConfGen::FragmentConformerGeneratorSettings
►CCDPL::Chem::FragmentGenerator	FragmentGenerator
CCDPL::Chem::BRICSFragmentGenerator	BRICSFragmentGenerator
CCDPL::Chem::RECAPFragmentGenerator	RECAPFragmentGenerator
CCDPL::ConfGen::FragmentLibrary
CCDPL::ConfGen::FragmentLibraryEntry	FragmentLibraryEntry
CCDPL::ConfGen::FragmentLibraryGenerator	FragmentLibraryGenerator
CCDPL::Chem::FragmentGenerator::FragmentLink
CCDPL::ConfGen::FragmentConformerGeneratorSettings::FragmentSettings
CCDPL::Shape::GaussianShapeAlignment
►CCDPL::Shape::GaussianShapeAlignmentStartGenerator
CCDPL::Shape::PrincipalAxesAlignmentStartGenerator
CCDPL::Shape::GaussianShapeFunction
CCDPL::Shape::GaussianShapeFunctionAlignment
CCDPL::Shape::GaussianShapeGenerator
►CCDPL::Shape::GaussianShapeOverlapFunction
CCDPL::Shape::ExactGaussianShapeOverlapFunction
CCDPL::Shape::FastGaussianShapeOverlapFunction
CCDPL::GRAIL::GeneralizedBellAtomDensity	GeneralizedBellAtomDensity
CCDPL::ForceField::GradientVectorTraits< GV >
CCDPL::ForceField::GradientVectorTraits< Math::VectorArray< V > >
CCDPL::ForceField::GradientVectorTraits< std::vector< V > >
CCDPL::GRAIL::GRAILDataSetGenerator	GRAILDataSetGenerator
CCDPL::GRAIL::GRAILDescriptorCalculator	GRAILDescriptorCalculator
CCDPL::GRAIL::GRAILXDescriptorCalculator	GRAILXDescriptorCalculator
►CCDPL::Vis::GraphicsPrimitive2D	The abstract base class of all 2D graphics primitives
CCDPL::Vis::ClipPathPrimitive2D	A graphics primitive representing a clipping region in 2D space
CCDPL::Vis::EllipsePrimitive2D	A graphics primitive representing a ellipse
CCDPL::Vis::LinePrimitive2D	A graphics primitive representing a single line
CCDPL::Vis::LineSegmentListPrimitive2D	A graphics primitive representing a list of disjoint line segments
CCDPL::Vis::PathPrimitive2D	A graphics primitive representing an arbitrary path in 2D space
CCDPL::Vis::PointListPrimitive2D	A graphics primitive representing a list of points
CCDPL::Vis::PolygonPrimitive2D	A graphics primitive representing a polygon
CCDPL::Vis::PolylinePrimitive2D	A graphics primitive representing a set of connected line segments
CCDPL::Vis::TextLabelPrimitive2D	A graphics primitive representing a text label
CCDPL::Chem::CompleteRingSet::Node::GreaterCmpFunc
CCDPL::Math::GridBinary1Traits< E1, E2, F >
►CCDPL::Math::GridBooleanBinaryFunctor< G1, G2 >
CCDPL::Math::GridEquality< G1, G2 >
CCDPL::Math::GridCoordinatesMatrixTransformTraits< MatrixType >
►CCDPL::Math::GridCoordinatesMatrixTransformTraits< BoundedMatrix< T, 4, 4 > >
CCDPL::Math::GridCoordinatesTransformTraits< BoundedMatrix< T, 4, 4 > >
►CCDPL::Math::GridCoordinatesMatrixTransformTraits< CMatrix< T, 4, 4 > >
CCDPL::Math::GridCoordinatesTransformTraits< CMatrix< T, 4, 4 > >
CCDPL::Math::GridCoordinatesTransformTraits< T >
CCDPL::Math::GridScalarUnaryFunctor< M >
►CCDPL::Math::GridScalarUnaryFunctor< G >
CCDPL::Math::GridElementSum< G >
►CCDPL::Math::GridTemporaryTraits< G >
CCDPL::Math::GridTemporaryTraits< const GridReference< G > >
CCDPL::Math::GridTemporaryTraits< GridReference< G > >
CCDPL::Math::GridUnaryTraits< E, F >
CCDPL::Chem::HashCodeCalculator	HashCodeCalculator
CCDPL::Base::LookupKey::HashFunc	A functor class implementing the generation of hash codes for LookupKey instances
CCDPL::MolProp::HBondAcceptorAtomTyper
CCDPL::MolProp::HBondDonorAtomTyper
CCDPL::Pharm::HBondingInteractionConstraint	HBondingInteractionConstraint
CCDPL::Biomol::HierarchyView	A datastructure allowing a hierarchical view on biological macromolecules
CCDPL::Chem::Hydrogen3DCoordinatesCalculator	Hydrogen3DCoordinatesCalculator
►CCDPL::Vis::ImageWriter
CCDPL::Vis::PDFMolecularGraphWriter	Creates 2D structure diagrams of molecular graphs in the Portable Document Format (PDF) [WPDF]
CCDPL::Vis::PDFReactionWriter	Creates 2D depictions of chemical reactions in the Portable Document Format (PDF) [WPDF]
CCDPL::Vis::PNGMolecularGraphWriter	Creates 2D structure diagrams of molecular graphs in the Portable Network Graphics (PNG) [WPNG] format
CCDPL::Vis::PNGReactionWriter	Creates 2D depictions of chemical reactions in the Portable Network Graphics (PNG) [WPNG] format
CCDPL::Vis::PSMolecularGraphWriter	Creates 2D structure diagrams of molecular graphs in the PostScript (PS) [WPS] format
CCDPL::Vis::PSReactionWriter	Creates 2D depictions of chemical reactions in the PostScript (PS) [WPS] format
CCDPL::Vis::SVGMolecularGraphWriter	Creates 2D structure diagrams of molecular graphs in the Scalable Vector Graphics (SVG) [WSVG] format
CCDPL::Vis::SVGReactionWriter	Creates 2D depictions of chemical reactions in the Scalable Vector Graphics (SVG) [WSVG] format
►CCDPL::Pharm::InteractionAnalyzer	InteractionAnalyzer
CCDPL::Pharm::DefaultInteractionAnalyzer	DefaultInteractionAnalyzer
CCDPL::Pharm::InteractionConstraintConnector	InteractionConstraintConnector
CCDPL::Pharm::InteractionPharmacophoreGenerator	InteractionPharmacophoreGenerator
►Cstd::ios_base	STL class
►Cstd::basic_ios< Char >	STL class
►Cstd::basic_istream< Char >	STL class
►CCDPL::Util::CompressionStreamBase< CompAlgo, std::basic_istream< char, std::char_traits< char > > >
CCDPL::Util::DecompressionIStream< CompAlgo, CharT, TraitsT >
►Cstd::basic_iostream< Char >	STL class
►CCDPL::Util::CompressionStreamBase< CompAlgo, std::basic_iostream< char, std::char_traits< char > > >
CCDPL::Util::CompressedIOStream< CompAlgo, CharT, TraitsT >
►Cstd::basic_ostream< Char >	STL class
►CCDPL::Util::CompressionStreamBase< CompAlgo, std::basic_ostream< char, std::char_traits< char > > >
CCDPL::Util::CompressionOStream< CompAlgo, CharT, TraitsT >
Cstd::basic_iostream< Char >	STL class
►Cis_arithmetic
CCDPL::Math::IsScalar< T >
CCDPL::Math::IsScalar< std::complex< T > >
►Citerator_facade
CCDPL::Util::IndexedElementIterator< ValueType, AccessFunc, IndexType >	A STL compatible random access iterator for container elements accessible by index
CCDPL::Math::KabschAlgorithm< T >	Implementation of the Kabsch algorithm [KABA]
CCDPL::Math::KabschAlgorithm< double >
CCDPL::Math::KabschAlgorithm< ValueType >
CCDPL::Chem::KekuleStructureCalculator	KekuleStructureCalculator
CCDPL::Chem::CanonicalNumberingCalculator::AtomNode::LessCmpFunc
CCDPL::Chem::CanonicalNumberingCalculator::Edge::LessCmpFunc
CCDPL::Chem::CIPPriorityCalculator::AtomNode::LessCmpFunc
CCDPL::Chem::SmallestSetOfSmallestRings::PathMessage::LessCmpFunc
►CCDPL::Vis::Line2D	Specifies a line segment in 2D space
CCDPL::Vis::LinePrimitive2D	A graphics primitive representing a single line
CCDPL::MolProp::LogSCalculator	LogSCalculator
CCDPL::Base::LookupKey	An unique lookup key for control-parameter and property values
CCDPL::Math::Lower
CCDPL::Util::Map< Key, Value, AllowDefValues, KeyCompFunc >	A unique sorted associative container that maps keys to values
►CCDPL::Util::Map< std::size_t, Color >
CCDPL::Vis::ColorTable	A container for the storage and lookup of Vis::Color objects that are associated with a numeric identifier
CCDPL::Util::Map< std::size_t, double >
►CCDPL::Util::Map< unsigned int, double, true >
CCDPL::MolProp::MassComposition	A data type for the storage of mass percent compositions of chemical compounds
►CCDPL::Util::Map< unsigned int, std::size_t, true >
CCDPL::MolProp::ElementHistogram	A data type for the storage of element histograms of chemical compounds
CCDPL::Pharm::FeatureTypeHistogram	A data type for the storage of feature type histograms of pharmacophores
CCDPL::Util::MapDefaultValue< ValueType, Allow >
CCDPL::Util::MapDefaultValue< ValueType, false >
CCDPL::Chem::MatchConstraint	MatchConstraint
CCDPL::Chem::MatchExpression< ObjType1, ObjType2 >	A generic boolean expression interface for the implementation of query/target object equivalence tests in molecular graph matching algorithms
►CCDPL::Chem::MatchExpression< Atom, MolecularGraph >
CCDPL::Chem::AtomConfigurationMatchExpression	AtomConfigurationMatchExpression
CCDPL::Chem::AtomEnvironmentMatchExpression	AtomEnvironmentMatchExpression
CCDPL::Chem::AtomSSSRRingSizeMatchExpression< MatchFunc >	AtomSSSRRingSizeMatchExpression
CCDPL::Chem::AtomTypeMatchExpression	AtomTypeMatchExpression
►CCDPL::Chem::MatchExpression< Bond, MolecularGraph >
CCDPL::Chem::BondConfigurationMatchExpression	BondConfigurationMatchExpression
CCDPL::Chem::BondDirectionMatchExpression	BondDirectionMatchExpression
CCDPL::Chem::BondReactionCenterStatusMatchExpression	BondReactionCenterStatusMatchExpression
CCDPL::Chem::BondSubstituentDirectionMatchExpression	BondSubstituentDirectionMatchExpression
►CCDPL::Chem::MatchExpression< MolecularGraph >
CCDPL::Chem::MolecularGraphComponentGroupingMatchExpression	MolecularGraphComponentGroupingMatchExpression
►CCDPL::Chem::MatchExpression< ObjType, void >	A generic boolean expression interface for the implementation of query/target object equivalence tests in molecular graph matching algorithms
CCDPL::Chem::NOTMatchExpression< ObjType, void >	NOTMatchExpression
CCDPL::Chem::PropertyMatchExpression< ValueType, MatchFunc, ObjType, void >	PropertyMatchExpression
CCDPL::Chem::MatchExpressionList< ObjType, void >
►CCDPL::Chem::MatchExpression< ObjType1, void >
CCDPL::Chem::MatchExpressionList< ObjType1, ObjType2 >	A container for the storage and evaluation of logical match expression lists
CCDPL::Chem::NOTMatchExpression< ObjType1, ObjType2 >	NOTMatchExpression
CCDPL::Chem::PropertyMatchExpression< ValueType, MatchFunc, ObjType1, ObjType2 >	PropertyMatchExpression
CCDPL::Chem::MatchExpressionList< ObjType1, void >
►CCDPL::Chem::MatchExpression< Reaction >
CCDPL::Chem::ReactionAtomMappingMatchExpression	ReactionAtomMappingMatchExpression
CCDPL::Chem::ReactionComponentGroupingMatchExpression	ReactionComponentGroupingMatchExpression
CCDPL::Math::Matrix< T, A >
CCDPL::Math::Matrix1VectorBinaryTraits< E1, E2, F >
CCDPL::Math::Matrix2VectorBinaryTraits< E1, E2, F >
CCDPL::Math::Matrix< double >
CCDPL::Math::Matrix< T >
CCDPL::Math::Matrix< ValueType >
CCDPL::Math::MatrixBinary1Traits< E1, E2, F >
CCDPL::Math::MatrixBinary2Traits< E1, E2, F >
►CCDPL::Math::MatrixBinaryFunctor< M1, M2 >
CCDPL::Math::MatrixProduct< M1, M2 >
►CCDPL::Math::MatrixBooleanBinaryFunctor< M1, M2 >
CCDPL::Math::MatrixEquality< M1, M2 >
CCDPL::Math::MatrixReference< M >
►CCDPL::Math::MatrixScalarRealUnaryFunctor< M >
CCDPL::Math::MatrixNorm1< M >
CCDPL::Math::MatrixNormFrobenius< M >
CCDPL::Math::MatrixNormInfinity< M >
►CCDPL::Math::MatrixScalarUnaryFunctor< M >
CCDPL::Math::MatrixElementSum< M >
CCDPL::Math::MatrixTrace< M >
►CCDPL::Math::MatrixTemporaryTraits< M >
CCDPL::Math::MatrixTemporaryTraits< const MatrixColumn< M > >
CCDPL::Math::MatrixTemporaryTraits< const MatrixRange< M > >
CCDPL::Math::MatrixTemporaryTraits< const MatrixReference< M > >
CCDPL::Math::MatrixTemporaryTraits< const MatrixRow< M > >
CCDPL::Math::MatrixTemporaryTraits< const MatrixSlice< M > >
CCDPL::Math::MatrixTemporaryTraits< const MatrixTranspose< M > >
CCDPL::Math::MatrixTemporaryTraits< const TriangularAdapter< M, Tri > >
CCDPL::Math::MatrixTemporaryTraits< MatrixColumn< M > >
CCDPL::Math::MatrixTemporaryTraits< MatrixRange< M > >
CCDPL::Math::MatrixTemporaryTraits< MatrixReference< M > >
CCDPL::Math::MatrixTemporaryTraits< MatrixRow< M > >
CCDPL::Math::MatrixTemporaryTraits< MatrixSlice< M > >
CCDPL::Math::MatrixTemporaryTraits< MatrixTranspose< M > >
CCDPL::Math::MatrixTemporaryTraits< TriangularAdapter< M, Tri > >
CCDPL::Math::MatrixUnaryTraits< E, F >
►CCDPL::Math::MatrixVectorBinaryFunctor< M, V >
CCDPL::Math::MatrixVectorProduct< M, V >
CCDPL::Math::VectorMatrixProduct< V, M >
CCDPL::Chem::MaxCommonAtomSubstructureSearch	MaxCommonAtomSubstructureSearch
CCDPL::Chem::MaxCommonBondSubstructureSearch	MaxCommonBondSubstructureSearch
CCDPL::GRAIL::FeatureInteractionScoreGridCalculator::MaxScoreFunctor
CCDPL::MolProp::MHMOPiChargeCalculator	MHMOPiChargeCalculator
CCDPL::Math::MinimizerVariableArrayTraits< A >
CCDPL::Math::MinimizerVariableArrayTraits< QuaternionTransformation >
CCDPL::Math::MinimizerVariableArrayTraits< std::vector< V > >
CCDPL::Math::MinimizerVariableArrayTraits< VA >
CCDPL::Math::MinimizerVariableArrayTraits< VectorArray< V > >
CCDPL::Math::MLRModel< T >	Performs Multiple Linear Regression [WLIREG] on a set of data points $(y_i, \vec{X}_i)$
CCDPL::ForceField::MMFF94AngleBendingInteraction
CCDPL::ForceField::MMFF94AngleBendingInteractionParameterizer
CCDPL::ForceField::MMFF94AngleBendingParameterTable
CCDPL::ForceField::MMFF94AromaticAtomTypeDefinitionTable
CCDPL::ForceField::MMFF94AtomTypePropertyTable
CCDPL::ForceField::MMFF94AtomTyper
CCDPL::ForceField::MMFF94BondChargeIncrementTable
CCDPL::ForceField::MMFF94BondStretchingInteraction
CCDPL::ForceField::MMFF94BondStretchingInteractionParameterizer
CCDPL::ForceField::MMFF94BondStretchingParameterTable
CCDPL::ForceField::MMFF94BondStretchingRuleParameterTable
CCDPL::ForceField::MMFF94BondTyper
CCDPL::ForceField::MMFF94ChargeCalculator
CCDPL::ForceField::MMFF94DefaultStretchBendParameterTable
CCDPL::ForceField::MMFF94ElectrostaticInteraction
CCDPL::ForceField::MMFF94ElectrostaticInteractionParameterizer
CCDPL::ForceField::MMFF94EnergyCalculator< ValueType >
CCDPL::ForceField::MMFF94FormalAtomChargeDefinitionTable
CCDPL::ForceField::MMFF94GradientCalculator< ValueType >
CCDPL::ForceField::MMFF94HeavyToHydrogenAtomTypeMap
CCDPL::ForceField::MMFF94InteractionData
CCDPL::ForceField::MMFF94InteractionParameterizer
CCDPL::ForceField::MMFF94OutOfPlaneBendingInteraction
CCDPL::ForceField::MMFF94OutOfPlaneBendingInteractionParameterizer
CCDPL::ForceField::MMFF94OutOfPlaneBendingParameterTable
CCDPL::ForceField::MMFF94PartialBondChargeIncrementTable
CCDPL::ForceField::MMFF94PrimaryToParameterAtomTypeMap
CCDPL::ForceField::MMFF94StretchBendInteraction
CCDPL::ForceField::MMFF94StretchBendInteractionParameterizer
CCDPL::ForceField::MMFF94StretchBendParameterTable
CCDPL::ForceField::MMFF94SymbolicAtomTypePatternTable
CCDPL::ForceField::MMFF94SymbolicToNumericAtomTypeMap
CCDPL::ForceField::MMFF94TorsionInteraction
CCDPL::ForceField::MMFF94TorsionInteractionParameterizer
CCDPL::ForceField::MMFF94TorsionParameterTable
CCDPL::ForceField::MMFF94VanDerWaalsInteraction
CCDPL::ForceField::MMFF94VanDerWaalsInteractionParameterizer
CCDPL::ForceField::MMFF94VanDerWaalsParameterTable
CCDPL::Descr::MolecularComplexityCalculator	MolecularComplexityCalculator
CCDPL::Descr::MoleculeAutoCorr2DDescriptorCalculator	MoleculeAutoCorr2DDescriptorCalculator
CCDPL::Descr::MoleculeAutoCorr3DDescriptorCalculator	MoleculeAutoCorr3DDescriptorCalculator
CCDPL::Descr::MoleculeRDFDescriptorCalculator	MoleculeRDFDescriptorCalculator
CCDPL::Chem::MorganNumberingCalculator	MorganNumberingCalculator
►CCDPL::Chem::MultiConfMoleculeInputProcessor	MultiConfMoleculeInputProcessor
CCDPL::Chem::DefaultMultiConfMoleculeInputProcessor	MultiConfMoleculeInputProcessor
CCDPL::Util::MultiMap< Key, Value, AllowDefValues, KeyCompFunc >	A multiple sorted associative container that maps keys to values
►CCDPL::Util::MultiMap< const Atom *, const Atom *, true >
CCDPL::Chem::AtomMapping	A data type for the storage and lookup of arbitrary atom to atom mappings
►CCDPL::Util::MultiMap< const Bond *, const Bond *, true >
CCDPL::Chem::BondMapping	A data type for the storage and lookup of arbitrary bond to bond mappings
►CCDPL::Util::MultiMap< const Entity3D *, const Entity3D *, true >
CCDPL::Chem::Entity3DMapping	A data type for the storage and lookup of arbitrary entity to entity mappings
►CCDPL::Util::MultiMap< const Feature *, const Feature *, true >
►CCDPL::Pharm::FeatureMapping	A data type for the storage and lookup of arbitrary feature to feature mappings
CCDPL::Pharm::SpatialFeatureMapping	SpatialFeatureMapping
CCDPL::Util::MultiMapDefaultValue< ValueType, Allow >
CCDPL::Util::MultiMapDefaultValue< ValueType, false >
CCDPL::Chem::Atom2DCoordinatesCalculator::LGNode::NodeLayoutInfo
CCDPL::Util::NullCheckDereferencer< ArgType, ResType >	An unary functor for the dereferenciation of pointers with null pointer checking
CCDPL::Util::ObjectPool< T >	A data structure that caches instances of type T up to a user specified amount
CCDPL::Util::ObjectPool< BasicAtom >
CCDPL::Util::ObjectPool< BasicBond >
CCDPL::Util::ObjectPool< BasicFeature >
CCDPL::Util::ObjectPool< BasicMolecule >
CCDPL::Util::ObjectPool< Edge >
CCDPL::Util::ObjectPool< Math::Vector3DArray >
CCDPL::Util::ObjectPool< PathMessage >
CCDPL::Util::ObjectPool< StructureData >
CCDPL::Util::ObjectPool< SubstructDescriptor >
CCDPL::Util::ObjectStack< T >	ObjectStack
CCDPL::Util::ObjectStack< AGEdge >
CCDPL::Util::ObjectStack< AGNode >
CCDPL::Util::ObjectStack< AtomBondMapping >
CCDPL::Util::ObjectStack< AtomNode >
CCDPL::Util::ObjectStack< Edge >
CCDPL::Util::ObjectStack< GaussianShapeFunction >
CCDPL::Util::ObjectStack< IndexArray >
CCDPL::Util::ObjectStack< LGEdge >
CCDPL::Util::ObjectStack< LinePrimitive2D >
CCDPL::Util::ObjectStack< LineSegmentListPrimitive2D >
CCDPL::Util::ObjectStack< PointListPrimitive2D >
CCDPL::Util::ObjectStack< PolygonPrimitive2D >
CCDPL::Util::ObjectStack< PolylinePrimitive2D >
CCDPL::Util::ObjectStack< RingInfo >
CCDPL::Util::ObjectStack< RingSysNode >
CCDPL::Util::ObjectStack< State >
CCDPL::Util::ObjectStack< StructureView2D >
CCDPL::Util::ObjectStack< TextLabelPrimitive2D >
CCDPL::Util::ObjectStack< Util::BitSet >
CCDPL::Util::ObjectStack< Util::STPairArray >
CCDPL::Pharm::OrthogonalPiPiInteractionConstraint	OrthogonalPiPiInteractionConstraint
CCDPL::Pharm::ParallelPiPiInteractionConstraint	ParallelPiPiInteractionConstraint
►CCDPL::Vis::Path2D	Provides a container for painting operations, enabling arbitrary graphical shapes to be constructed and reused
CCDPL::Vis::ClipPathPrimitive2D	A graphics primitive representing a clipping region in 2D space
CCDPL::Vis::PathPrimitive2D	A graphics primitive representing an arbitrary path in 2D space
CCDPL::Vis::Path2DConverter	Provides an interface for classes that implement the conversion of Vis::Path2D objects into rendering backend specific path descriptions or drawing operations
CCDPL::Descr::PathFingerprintGenerator	PathFingerprintGenerator
CCDPL::Chem::PatternAtomTyper::Pattern
CCDPL::Chem::SubstructureHistogramCalculator::Pattern
CCDPL::Chem::PatternAtomTyper	PatternAtomTyper
CCDPL::Biomol::PDBData	A datastructure for the storage of imported PDB data records (see [CTFILE])
CCDPL::Vis::Pen	Specifies how to draw lines and outlines of shapes
CCDPL::MolProp::PEOESigmaChargeCalculator	PEOESigmaChargeCalculator
CCDPL::Descr::PharmacophoreAutoCorr3DDescriptorCalculator	PharmacophoreAutoCorr3DDescriptorCalculator
►CCDPL::Pharm::PharmacophoreFitScore	PharmacophoreFitScore
CCDPL::Pharm::PharmacophoreFitScreeningScore	PharmacophoreFitScreeningScore
►CCDPL::Pharm::PharmacophoreGenerator	PharmacophoreGenerator
CCDPL::Pharm::DefaultPharmacophoreGenerator	DefaultPharmacophoreGenerator
CCDPL::Descr::PharmacophoreRDFDescriptorCalculator	PharmacophoreRDFDescriptorCalculator
CCDPL::Chem::CIPPriorityCalculator::AtomNode::PriorityGreaterCmpFunc
CCDPL::Chem::CIPPriorityCalculator::AtomNode::PriorityLessCmpFunc
►CCDPL::Base::PropertyContainer	A class providing methods for the storage and lookup of object properties
CCDPL::Chem::Bond	Bond
►CCDPL::Chem::Entity3D	Entity3D
CCDPL::Chem::Atom	Atom
►CCDPL::Pharm::Feature	Feature
CCDPL::Pharm::BasicFeature	BasicFeature
CCDPL::Chem::MolecularGraph	MolecularGraph
►CCDPL::Chem::Reaction	Reaction
CCDPL::Chem::BasicReaction	BasicReaction
►CCDPL::Grid::AttributedGrid	AttributedGrid
CCDPL::Grid::SpatialGrid< T, CVT >	SpatialGrid
CCDPL::Pharm::FeatureContainer	FeatureContainer
CCDPL::Shape::GaussianShape	A data type for the descripton of arbitrary shapes composed of spheres approximated by gaussian functions
CCDPL::Util::PropertyValue< T >	An unary functor that retrieves the value of a given property from the Base::PropertyContainer instance provided as argument
CCDPL::Util::PropertyValueProduct< ResType, PropertyValueType >	A binary functor that calculates the product of two property values retrieved from a pair of Base::PropertyContainer instances passed as argument
CCDPL::Chem::ProtonationStateStandardizer	Sets the protation state of molecules according to desired objectives
CCDPL::Vis::QtObjectFactory	Provides methods for the creation of QFont, QColor, QPen and QBrush objects from Font, Color, Pen and Brush instances
CCDPL::Math::QuaternionBinary1Traits< E1, E2, F >
CCDPL::Math::QuaternionBinary2Traits< E1, E2, F >
►CCDPL::Math::QuaternionBinaryFunctor< Q1, Q2 >
CCDPL::Math::QuaternionProduct< Q1, Q2 >
►CCDPL::Math::QuaternionBooleanBinaryFunctor< Q1, Q2 >
CCDPL::Math::QuaternionEquality< Q1, Q2 >
►CCDPL::Math::QuaternionScalarRealUnaryFunctor< Q >
CCDPL::Math::QuaternionNorm< Q >
CCDPL::Math::QuaternionNorm2< Q >
►CCDPL::Math::QuaternionScalarUnaryFunctor< Q >
CCDPL::Math::QuaternionElementSum< Q >
►CCDPL::Math::QuaternionTemporaryTraits< Q >
CCDPL::Math::QuaternionTemporaryTraits< const QuaternionReference< Q > >
CCDPL::Math::QuaternionTemporaryTraits< QuaternionReference< Q > >
CCDPL::Math::QuaternionTemporaryTraits< const VectorQuaternionAdapter< V > >
CCDPL::Math::QuaternionTemporaryTraits< VectorQuaternionAdapter< V > >
CCDPL::Math::QuaternionUnary1Traits< E, F >
CCDPL::Math::QuaternionUnary2Traits< E, F >
►CCDPL::Math::QuaternionUnaryFunctor< Q >
CCDPL::Math::QuaternionConjugate< Q >
CCDPL::Math::QuaternionUnreal< Q >
►CCDPL::Math::QuaternionVectorBinaryFunctor< Q, V >
CCDPL::Math::QuaternionVectorRotation< Q, V >
CCDPL::Math::QuaternionVectorBinaryTraits< E1, E2, F >
CCDPL::Math::Range< S >
CCDPL::Math::Range< SizeType >
CCDPL::Descr::RDFCodeCalculator< T >	RDFCodeCalculator
►CCDPL::Descr::RDFCodeCalculator< Chem::Atom >
CCDPL::Descr::AtomRDFCodeCalculator	AtomRDFCodeCalculator
►CCDPL::Descr::RDFCodeCalculator< Pharm::Feature >
CCDPL::Descr::FeatureRDFCodeCalculator	FeatureRDFCodeCalculator
CCDPL::Chem::ReactionSubstructureSearch	ReactionSubstructureSearch
CCDPL::Chem::Reactor	Reactor
CCDPL::Vis::Rectangle2D	Specifies an axis aligned rectangular area in 2D space
CCDPL::Shape::ReferenceColorTverskyScore
CCDPL::Shape::ReferenceShapeTverskyScore
CCDPL::Shape::ReferenceTotalOverlapTverskyScore
CCDPL::Shape::ReferenceTverskyComboScore
CCDPL::Grid::RegularGrid< T, CVT >	RegularGrid
CCDPL::Grid::RegularGridSet< T, CVT >	RegularGridSet
►CCDPL::Vis::Renderer2D	An interface that provides methods for low level 2D drawing operations
CCDPL::Vis::CairoRenderer2D	Implements the Renderer2D interface on top of the Cairo 2D Graphics Library
CCDPL::Vis::QtRenderer2D	Implements the Renderer2D interface on top of the Qt Toolkit
CCDPL::Biomol::ResidueDictionary	A global dictionary for the lookup of meta-data associated with the residues in biological macromolecules
CCDPL::Chem::ResonanceStructureGenerator	ResonanceStructureGenerator
CCDPL::Shape::GaussianShapeFunctionAlignment::Result
CCDPL::ConfGen::RMSDConformerSelector
►CCDPL::Math::Scalar13QuaternionTernaryFunctor< T1, Q, T2 >
CCDPL::Math::ScalarQuaternionDivision< T1, Q, T2 >
CCDPL::Math::Scalar13QuaternionTernaryTraits< E1, E2, E3, F >
CCDPL::Math::Scalar1GridBinaryTraits< E1, E2, F >
CCDPL::Math::Scalar1MatrixBinaryTraits< E1, E2, F >
CCDPL::Math::Scalar1QuaternionBinary1Traits< E1, E2, F >
CCDPL::Math::Scalar1QuaternionBinary2Traits< E1, E2, F >
►CCDPL::Math::Scalar1QuaternionBinaryFunctor< T, Q >
CCDPL::Math::Scalar1QuaternionAddition< T, Q >
CCDPL::Math::Scalar1QuaternionSubtraction< T, Q >
CCDPL::Math::Scalar1VectorBinaryTraits< E1, E2, F >
CCDPL::Math::Scalar2GridBinaryTraits< E1, E2, F >
CCDPL::Math::Scalar2MatrixBinaryTraits< E1, E2, F >
CCDPL::Math::Scalar2QuaternionBinary1Traits< E1, E2, F >
CCDPL::Math::Scalar2QuaternionBinary2Traits< E1, E2, F >
►CCDPL::Math::Scalar2QuaternionBinaryFunctor< Q, T >
CCDPL::Math::QuaternionInverse< Q, T >
CCDPL::Math::Scalar2QuaternionAddition< Q, T >
CCDPL::Math::Scalar2QuaternionSubtraction< Q, T >
CCDPL::Math::Scalar2VectorBinaryTraits< E1, E2, F >
►CCDPL::Math::Scalar3GridBooleanTernaryFunctor< G1, G2, T >
CCDPL::Math::GridToleranceEquality< G1, G2, T >
►CCDPL::Math::Scalar3MatrixBooleanTernaryFunctor< M1, M2, T >
CCDPL::Math::MatrixToleranceEquality< M1, M2, T >
►CCDPL::Math::Scalar3QuaternionBooleanTernaryFunctor< Q1, Q2, T >
CCDPL::Math::QuaternionToleranceEquality< Q1, Q2, T >
►CCDPL::Math::Scalar3QuaternionTernaryFunctor< Q1, Q2, T >
CCDPL::Math::QuaternionDivision< Q1, Q2, T >
CCDPL::Math::Scalar3QuaternionTernaryTraits< E1, E2, E3, F >
►CCDPL::Math::Scalar3VectorBooleanTernaryFunctor< V1, V2, T >
CCDPL::Math::VectorToleranceEquality< V1, V2, T >
CCDPL::Math::ScalarAbsImpl< Signed >
CCDPL::Math::ScalarAbsImpl< false >
►CCDPL::Math::ScalarBinaryAssignmentFunctor< T1, T2 >
CCDPL::Math::ScalarAdditionAssignment< T1, T2 >
CCDPL::Math::ScalarAssignment< T1, T2 >
CCDPL::Math::ScalarDivisionAssignment< T1, T2 >
CCDPL::Math::ScalarMultiplicationAssignment< T1, T2 >
CCDPL::Math::ScalarSubtractionAssignment< T1, T2 >
►CCDPL::Math::ScalarBinaryFunctor< T1, T2 >
CCDPL::Math::ScalarAddition< T1, T2 >
CCDPL::Math::ScalarDivision< T1, T2 >
CCDPL::Math::ScalarMultiplication< T1, T2 >
CCDPL::Math::ScalarSubtraction< T1, T2 >
►CCDPL::Math::ScalarRealUnaryFunctor< T >
CCDPL::Math::ScalarImaginary< T >
CCDPL::Math::ScalarReal< T >
CCDPL::Math::ScalarTraits< T >
►CCDPL::Math::ScalarUnaryFunctor< T >
CCDPL::Math::ScalarConjugation< T >
CCDPL::Math::ScalarNegation< T >
CCDPL::GRAIL::FeatureInteractionScoreGridCalculator::ScoreSumFunctor
►CCDPL::Pharm::ScreeningDBAccessor	A class for accessing the data stored in pharmacophore screening databases
CCDPL::Pharm::PSDScreeningDBAccessor	A class for accessing pharmacophore screening databases in the built-in optimized format
►CCDPL::Pharm::ScreeningDBCreator	A class for the creation of optimized pharmacophore screening databases
CCDPL::Pharm::PSDScreeningDBCreator	A class for the creation of optimized pharmacophore screening databases
CCDPL::Pharm::ScreeningProcessor	ScreeningProcessor
CCDPL::Shape::ScreeningProcessor
CCDPL::Shape::ScreeningSettings
CCDPL::Pharm::ScreeningProcessor::SearchHit
CCDPL::Shape::ShapeTanimotoScore
CCDPL::Shape::ShapeTverskyScore
CCDPL::Vis::SizeSpecification	Specifies the value and type of a size attribute and defines how the value may change during processing steps
CCDPL::Math::Slice< S, D >
CCDPL::Math::Slice< SizeType, DifferenceType >
CCDPL::Math::SparseContainerElement< C, K >
CCDPL::Chem::SpatialEntityAlignment< T >	SpatialEntityAlignment
►CCDPL::Chem::SpatialEntityAlignment< Feature >
CCDPL::Pharm::PharmacophoreAlignment	PharmacophoreAlignment
CCDPL::Chem::StereoDescriptor	A data structure for the storage and retrieval of stereochemical information about atoms and bonds
CCDPL::Chem::StereoisomerGenerator	StereoisomerGenerator
►CStreamType
CCDPL::Util::CompressionStreamBase< CompAlgo, StreamType >
CCDPL::Chem::StringDataBlockEntry	Represents a data item in the structure or reaction data block of a MDL SD- or RD-File data record (see [CTFILE])
CCDPL::Chem::ResonanceStructureGenerator::StructureData
CCDPL::ConfGen::StructureGenerator
CCDPL::ConfGen::StructureGeneratorSettings
CCDPL::Chem::SubstructureHistogramCalculator	SubstructureHistogramCalculator
CCDPL::Chem::SubstructureSearch	SubstructureSearch
CCDPL::Chem::SurfaceAtomExtractor	SurfaceAtomExtractor
CCDPL::Chem::SymmetryClassCalculator::AtomNode::SVMNumberCmpFunc
CCDPL::Chem::SymmetryClassCalculator::AtomNode::SymClassCmpFunc
CCDPL::Chem::SymmetryClassCalculator	SymmetryClassCalculator
CCDPL::Shape::TanimotoComboScore
►CCDPL::Chem::TautomerGenerator	TautomerGenerator
CCDPL::Chem::DefaultTautomerGenerator	DefaultTautomerGenerator
►CCDPL::Chem::TautomerizationRule	TautomerizationRule
►CCDPL::Chem::PatternBasedTautomerizationRule	PatternBasedTautomerizationRule
CCDPL::Chem::AmideImidicAcidTautomerization	AmideImidicAcidTautomerizationRule
CCDPL::Chem::GenericHydrogen13ShiftTautomerization	GenericHydrogen13ShiftTautomerizationRule
CCDPL::Chem::GenericHydrogen15ShiftTautomerization	GenericHydrogen15ShiftTautomerizationRule
CCDPL::Chem::ImineEnamineTautomerization	ImineEnamineTautomerizationRule
CCDPL::Chem::KeteneYnolTautomerization	KeteneYnolTautomerizationRule
CCDPL::Chem::KetoEnolTautomerization	KetoEnolTautomerizationRule
CCDPL::Chem::LactamLactimTautomerization	LactamLactimTautomerizationRule
CCDPL::Chem::NitroAciTautomerization	NitroAciTautomerizationRule
CCDPL::Chem::NitrosoOximeTautomerization	NitrosoOximeTautomerizationRule
CCDPL::Chem::PhosphinicAcidTautomerization	PhosphinicAcidTautomerizationRule
CCDPL::Chem::SulfenicAcidTautomerization	SulfenicAcidTautomerizationRule
CCDPL::Chem::TautomerScore	TautomerScore
CCDPL::Chem::TopologicalEntityAlignment< T >	TopologicalEntityAlignment
CCDPL::Chem::TopologicalEntityAlignment< Feature >
►CCDPL::ConfGen::TorsionCategory
CCDPL::ConfGen::TorsionLibrary
CCDPL::ConfGen::TorsionDriver
CCDPL::ConfGen::TorsionDriverSettings
CCDPL::ConfGen::TorsionRule
CCDPL::ConfGen::TorsionRuleMatch
CCDPL::ConfGen::TorsionRuleMatcher
CCDPL::Shape::TotalOverlapTanimotoScore
CCDPL::Shape::TotalOverlapTverskyScore
CCDPL::MolProp::TPSACalculator	TPSACalculator
CCDPL::Shape::TverskyComboScore
CCDPL::Math::TypeTraits< T >
►CCDPL::Math::TypeTraits< SparseContainerElement< C >::ValueType >
CCDPL::Math::TypeTraits< SparseContainerElement< C > >
CCDPL::ForceField::UFFAtomTypePropertyTable
CCDPL::Math::UnitLower
CCDPL::Math::UnitUpper
CCDPL::Math::Upper
CCDPL::Math::Vector< T, A >
CCDPL::Math::Vector< double >
CCDPL::Math::Vector< T >
CCDPL::Math::Vector< ValueType >
CCDPL::Math::VectorArrayAlignmentCalculator< VA, V, T >
CCDPL::Math::VectorArrayAlignmentCalculator< Math::Vector3DArray >
CCDPL::Math::VectorBinary1Traits< E1, E2, F >
CCDPL::Math::VectorBinary2Traits< E1, E2, F >
►CCDPL::Math::VectorBinaryFunctor< V1, V2 >
CCDPL::Math::VectorCrossProduct< V1, V2 >
►CCDPL::Math::VectorBooleanBinaryFunctor< V1, V2 >
CCDPL::Math::VectorEquality< V1, V2 >
CCDPL::Math::VectorElementAccessor< E >
CCDPL::Math::VectorElementAccessor< const E >
CCDPL::Math::VectorIteratorTraits< E >
CCDPL::Math::VectorIteratorTraits< const E >
CCDPL::Math::VectorMatrixBinaryTraits< E1, E2, F >
►CCDPL::Math::VectorMatrixUnaryFunctor< V >
CCDPL::Math::CrossProductMatrixFromVector< V >
CCDPL::Math::DiagonalMatrixFromVector< V >
CCDPL::Math::VectorMatrixUnaryTraits< E, F >
►CCDPL::Math::VectorScalarBinaryFunctor< V1, V2 >
CCDPL::Math::VectorAngleCosine< V1, V2, T >
CCDPL::Math::VectorInnerProduct< V1, V2 >
►CCDPL::Math::VectorScalarIndexUnaryFunctor< V >
CCDPL::Math::VectorNormInfinityIndex< V >
►CCDPL::Math::VectorScalarRealUnaryFunctor< V >
CCDPL::Math::VectorNorm1< V >
CCDPL::Math::VectorNorm2< V >
CCDPL::Math::VectorNormInfinity< V >
►CCDPL::Math::VectorScalarUnaryFunctor< V >
CCDPL::Math::VectorElementSum< V >
►CCDPL::Math::VectorTemporaryTraits< V >
CCDPL::Math::VectorTemporaryTraits< const HomogenousCoordsAdapter< V > >
CCDPL::Math::VectorTemporaryTraits< const VectorRange< V > >
CCDPL::Math::VectorTemporaryTraits< const VectorReference< V > >
CCDPL::Math::VectorTemporaryTraits< const VectorSlice< V > >
CCDPL::Math::VectorTemporaryTraits< HomogenousCoordsAdapter< V > >
CCDPL::Math::VectorTemporaryTraits< VectorRange< V > >
CCDPL::Math::VectorTemporaryTraits< VectorReference< V > >
CCDPL::Math::VectorTemporaryTraits< VectorSlice< V > >
CCDPL::Math::VectorTemporaryTraits< const QuaternionVectorAdapter< Q > >
►CCDPL::Math::VectorTemporaryTraits< M >
CCDPL::Math::VectorTemporaryTraits< const MatrixColumn< M > >
CCDPL::Math::VectorTemporaryTraits< const MatrixRange< M > >
CCDPL::Math::VectorTemporaryTraits< const MatrixReference< M > >
CCDPL::Math::VectorTemporaryTraits< const MatrixRow< M > >
CCDPL::Math::VectorTemporaryTraits< const MatrixSlice< M > >
CCDPL::Math::VectorTemporaryTraits< const MatrixTranspose< M > >
CCDPL::Math::VectorTemporaryTraits< const TriangularAdapter< M, Tri > >
CCDPL::Math::VectorTemporaryTraits< MatrixColumn< M > >
CCDPL::Math::VectorTemporaryTraits< MatrixRange< M > >
CCDPL::Math::VectorTemporaryTraits< MatrixReference< M > >
CCDPL::Math::VectorTemporaryTraits< MatrixRow< M > >
CCDPL::Math::VectorTemporaryTraits< MatrixSlice< M > >
CCDPL::Math::VectorTemporaryTraits< MatrixTranspose< M > >
CCDPL::Math::VectorTemporaryTraits< TriangularAdapter< M, Tri > >
CCDPL::Math::VectorTemporaryTraits< QuaternionVectorAdapter< Q > >
CCDPL::Math::VectorUnaryTraits< E, F >
CCDPL::Util::DGCoordinatesGenerator< 3, T >::VolumeConstraint
CCDPL::Pharm::XBondingInteractionConstraint	XBondingInteractionConstraint
CCDPL::MolProp::XLogPCalculator	XLogPCalculator
CArray< BitSet >
Cbool
CCMatrix< double, 4, 4 >
Cconst EntityType *
CDistanceConstraint
Cdouble
CSharedPointer
Cstatic constexpr double
CSTPair
Ctype
Ctype
Ctype
Ctype
Ctype
CV
►CVectorArray< Vector2D >
►CCDPL::Vis::PointArray2D	Stores a set of points in 2D space
CCDPL::Vis::LineSegmentListPrimitive2D	A graphics primitive representing a list of disjoint line segments
CCDPL::Vis::PointListPrimitive2D	A graphics primitive representing a list of points
CCDPL::Vis::PolygonPrimitive2D	A graphics primitive representing a polygon
CCDPL::Vis::PolylinePrimitive2D	A graphics primitive representing a set of connected line segments
►CVectorArray< Vector3D >
CCDPL::ConfGen::ConformerData