Chemical Data Processing Library Python API - Version 1.2.0
Class Index
A
|
B
|
C
|
D
|
E
|
F
|
G
|
H
|
I
|
J
|
K
|
L
|
M
|
N
|
O
|
P
|
Q
|
R
|
S
|
T
|
U
|
V
|
X
A
BindingAffinityCalculator.AffinityMeasure
(
CDPL.GRAIL
)
AlignedColorTverskyScore
(
CDPL.Shape
)
AlignedShapeTverskyScore
(
CDPL.Shape
)
AlignedTotalOverlapTverskyScore
(
CDPL.Shape
)
AlignedTverskyComboScore
(
CDPL.Shape
)
Alignment
(
CDPL.Vis
)
ScreeningSettings.AlignmentMode
(
CDPL.Shape
)
AlignmentResult
(
CDPL.Shape
)
AlignmentResultSelectionMode
(
CDPL.Shape
)
AmideImidicAcidTautomerization
(
CDPL.Chem
)
ANDAtomMatchExpressionList
(
CDPL.Chem
)
ANDBondMatchExpressionList
(
CDPL.Chem
)
ANDMolecularGraphMatchExpressionList
(
CDPL.Chem
)
ANDReactionMatchExpressionList
(
CDPL.Chem
)
TorsionRule.AngleEntry
(
CDPL.ConfGen
)
Any
(
CDPL.Base
)
AromaticFeatureGenerator
(
CDPL.Pharm
)
AromaticRingSet
(
CDPL.Chem
)
AromaticSSSRSubset
(
CDPL.Chem
)
AromaticSubstructure
(
CDPL.Chem
)
ArrowStyle
(
CDPL.Vis
)
Atom
(
CDPL.Chem
)
Atom2DCoordinatesCalculator
(
CDPL.Chem
)
Atom3DCoordinatesFunction
(
CDPL.Chem
)
Atom3DCoordinatesFunctor
(
CDPL.Chem
)
TorsionRuleMatch.AtomArray
(
CDPL.ConfGen
)
AtomArray3DCoordinatesFunctor
(
CDPL.Chem
)
AtomAutoCorrelation3DVectorCalculator
(
CDPL.Descr
)
AtomBondMapping
(
CDPL.Chem
)
AtomColorTable
(
CDPL.Vis
)
AtomConfiguration
(
CDPL.Chem
)
AtomConfigurationMatchExpression
(
CDPL.Chem
)
AtomConformer3DCoordinatesFunctor
(
CDPL.Chem
)
AtomContainer
(
CDPL.Chem
)
AtomDensityGridCalculator
(
CDPL.GRAIL
)
AtomDictionary
(
CDPL.Chem
)
AtomEnvironmentMatchExpression
(
CDPL.Chem
)
AtomHydrophobicityCalculator
(
CDPL.MolProp
)
CanonicalFragment.AtomMapping
(
CDPL.ConfGen
)
AtomMapping
(
CDPL.Chem
)
AtomMatchConstraint
(
CDPL.Chem
)
AtomMatchExpression
(
CDPL.Chem
)
AtomMatchExpressionList
(
CDPL.Chem
)
AtomMatchExpressionPtrAtomFunctor
(
CDPL.Chem
)
AtomPredicate
(
CDPL.Chem
)
AtomProperty
(
CDPL.Chem
)
AtomProperty
(
CDPL.ForceField
)
AtomProperty
(
CDPL.MolProp
)
AtomProperty
(
CDPL.Vis
)
AtomProperty
(
CDPL.Biomol
)
AtomPropertyDefault
(
CDPL.MolProp
)
AtomPropertyDefault
(
CDPL.Vis
)
AtomPropertyDefault
(
CDPL.Biomol
)
AtomPropertyDefault
(
CDPL.Chem
)
AtomPropertyFlag
(
CDPL.Biomol
)
AtomPropertyFlag
(
CDPL.Chem
)
AtomRDFCodeCalculator
(
CDPL.Descr
)
Fragment.AtomSequence
(
CDPL.Chem
)
Atom.AtomSequence
(
CDPL.Chem
)
Bond.AtomSequence
(
CDPL.Chem
)
MolecularGraph.AtomSequence
(
CDPL.Chem
)
Molecule.AtomSequence
(
CDPL.Chem
)
AtomType
(
CDPL.Chem
)
AtomTypeMatchExpression
(
CDPL.Chem
)
AttributedGrid
(
CDPL.Grid
)
AttributedGridProperty
(
CDPL.GRAIL
)
AttributedGridProperty
(
CDPL.Grid
)
AttributedGridPropertyDefault
(
CDPL.GRAIL
)
AttributedGridPropertyDefault
(
CDPL.Grid
)
AutoCorrelation2DVectorCalculator
(
CDPL.Descr
)
AutomorphismGroupSearch
(
CDPL.Chem
)
B
BadCast
(
CDPL.Base
)
BasicAtom
(
CDPL.Chem
)
BasicBond
(
CDPL.Chem
)
BasicFeature
(
CDPL.Pharm
)
BasicMolecule
(
CDPL.Chem
)
BasicPharmacophore
(
CDPL.Pharm
)
BasicReaction
(
CDPL.Chem
)
BCUTDescriptorCalculator
(
CDPL.Descr
)
BemisMurckoAnalyzer
(
CDPL.Chem
)
BindingAffinityCalculator
(
CDPL.GRAIL
)
BitSet
(
CDPL.Util
)
BitSetArray
(
CDPL.Util
)
Bond
(
CDPL.Chem
)
BondConfiguration
(
CDPL.Chem
)
BondConfigurationMatchExpression
(
CDPL.Chem
)
BondContainer
(
CDPL.Chem
)
BondDirection
(
CDPL.Chem
)
BondDirectionMatchExpression
(
CDPL.Chem
)
BondMapping
(
CDPL.Chem
)
BondMatchConstraint
(
CDPL.Chem
)
BondMatchExpression
(
CDPL.Chem
)
BondMatchExpressionList
(
CDPL.Chem
)
BondMatchExpressionPtrBondFunctor
(
CDPL.Chem
)
BondOrderCalculator
(
CDPL.Chem
)
PatternBasedTautomerizationRule.BondOrderChange
(
CDPL.Chem
)
BondPredicate
(
CDPL.Chem
)
BondProperty
(
CDPL.Vis
)
BondProperty
(
CDPL.Chem
)
BondProperty
(
CDPL.MolProp
)
BondProperty
(
CDPL.ForceField
)
BondPropertyDefault
(
CDPL.Chem
)
BondPropertyDefault
(
CDPL.Vis
)
BondPropertyFlag
(
CDPL.Chem
)
BondReactionCenterStatusMatchExpression
(
CDPL.Chem
)
Fragment.BondSequence
(
CDPL.Chem
)
Molecule.BondSequence
(
CDPL.Chem
)
MolecularGraph.BondSequence
(
CDPL.Chem
)
Atom.BondSequence
(
CDPL.Chem
)
BondStereoFlag
(
CDPL.Chem
)
BondStereoFlagCalculator
(
CDPL.Chem
)
BondSubstituentDirectionMatchExpression
(
CDPL.Chem
)
BoolAlignmentResult2Functor
(
CDPL.Shape
)
BoolAtom2Functor
(
CDPL.Chem
)
BoolAtom4Functor
(
CDPL.Chem
)
BoolAtomMappingFunctor
(
CDPL.Chem
)
BoolBond2Functor
(
CDPL.Chem
)
BoolConstMolecularGraphFunctor
(
CDPL.Chem
)
BoolDoubleFunctor
(
CDPL.Pharm
)
BoolEntity3D2Functor
(
CDPL.Chem
)
BoolEntity3D4Functor
(
CDPL.Chem
)
BoolEntity3DMappingFunctor
(
CDPL.Chem
)
BoolFeature2Functor
(
CDPL.Pharm
)
BoolFeature2Matrix4DFunctor
(
CDPL.Pharm
)
BoolFeature4Functor
(
CDPL.Pharm
)
BoolFeatureFunctor
(
CDPL.Pharm
)
BoolMolecularGraphAtomBondMappingFunctor
(
CDPL.Chem
)
BoolMolecularGraphFunctor
(
CDPL.Chem
)
BoolSearchHitDoubleFunctor
(
CDPL.Pharm
)
BoolSizeType2Functor
(
CDPL.Pharm
)
BoolSizeType2Functor
(
CDPL.Shape
)
BoolSizeTypeFunctor
(
CDPL.Shape
)
BoolSTPairArrayFunctor
(
CDPL.Chem
)
BRICSAtomLabel
(
CDPL.Chem
)
BRICSFragmentGenerator
(
CDPL.Chem
)
BRICSRuleID
(
CDPL.Chem
)
BronKerboschAlgorithm
(
CDPL.Util
)
Brush
(
CDPL.Vis
)
BurdenMatrixGenerator
(
CDPL.Descr
)
BuriednessGridCalculator
(
CDPL.GRAIL
)
BuriednessScore
(
CDPL.GRAIL
)
BZip2IOStream
(
CDPL.Util
)
BZip2IStream
(
CDPL.Util
)
BZip2OStream
(
CDPL.Util
)
C
CairoFontMetrics
(
CDPL.Vis.CairoBackend
)
CairoRenderer2D
(
CDPL.Vis.CairoBackend
)
CalculationFailed
(
CDPL.Base
)
CallbackFunction
(
CDPL.ConfGen
)
CanonicalFragment
(
CDPL.ConfGen
)
CanonicalNumberingCalculator
(
CDPL.Chem
)
Pen.CapStyle
(
CDPL.Vis
)
MMCIFData.Category
(
CDPL.Biomol
)
TorsionCategory.CategorySequence
(
CDPL.ConfGen
)
CationPiInteractionConstraint
(
CDPL.Pharm
)
CationPiInteractionScore
(
CDPL.Pharm
)
CDFBZ2DRegularGridInputHandler
(
CDPL.Grid
)
CDFBZ2DRegularGridOutputHandler
(
CDPL.Grid
)
CDFBZ2DRegularGridReader
(
CDPL.Grid
)
CDFBZ2DRegularGridSetInputHandler
(
CDPL.Grid
)
CDFBZ2DRegularGridSetOutputHandler
(
CDPL.Grid
)
CDFBZ2DRegularGridSetReader
(
CDPL.Grid
)
CDFBZ2DRegularGridSetWriter
(
CDPL.Grid
)
CDFBZ2DRegularGridWriter
(
CDPL.Grid
)
CDFBZ2FeatureContainerOutputHandler
(
CDPL.Pharm
)
CDFBZ2FeatureContainerWriter
(
CDPL.Pharm
)
CDFBZ2MolecularGraphOutputHandler
(
CDPL.Chem
)
CDFBZ2MolecularGraphWriter
(
CDPL.Chem
)
CDFBZ2MoleculeInputHandler
(
CDPL.Chem
)
CDFBZ2MoleculeReader
(
CDPL.Chem
)
CDFBZ2PharmacophoreInputHandler
(
CDPL.Pharm
)
CDFBZ2PharmacophoreReader
(
CDPL.Pharm
)
CDFBZ2ReactionInputHandler
(
CDPL.Chem
)
CDFBZ2ReactionOutputHandler
(
CDPL.Chem
)
CDFBZ2ReactionReader
(
CDPL.Chem
)
CDFBZ2ReactionWriter
(
CDPL.Chem
)
CDFDRegularGridInputHandler
(
CDPL.Grid
)
CDFDRegularGridOutputHandler
(
CDPL.Grid
)
CDFDRegularGridReader
(
CDPL.Grid
)
CDFDRegularGridSetInputHandler
(
CDPL.Grid
)
CDFDRegularGridSetOutputHandler
(
CDPL.Grid
)
CDFDRegularGridSetReader
(
CDPL.Grid
)
CDFDRegularGridSetWriter
(
CDPL.Grid
)
CDFDRegularGridWriter
(
CDPL.Grid
)
CDFFeatureContainerOutputHandler
(
CDPL.Pharm
)
CDFFeatureContainerWriter
(
CDPL.Pharm
)
CDFGZDRegularGridInputHandler
(
CDPL.Grid
)
CDFGZDRegularGridOutputHandler
(
CDPL.Grid
)
CDFGZDRegularGridReader
(
CDPL.Grid
)
CDFGZDRegularGridSetInputHandler
(
CDPL.Grid
)
CDFGZDRegularGridSetOutputHandler
(
CDPL.Grid
)
CDFGZDRegularGridSetReader
(
CDPL.Grid
)
CDFGZDRegularGridSetWriter
(
CDPL.Grid
)
CDFGZDRegularGridWriter
(
CDPL.Grid
)
CDFGZFeatureContainerOutputHandler
(
CDPL.Pharm
)
CDFGZFeatureContainerWriter
(
CDPL.Pharm
)
CDFGZMolecularGraphOutputHandler
(
CDPL.Chem
)
CDFGZMolecularGraphWriter
(
CDPL.Chem
)
CDFGZMoleculeInputHandler
(
CDPL.Chem
)
CDFGZMoleculeReader
(
CDPL.Chem
)
CDFGZPharmacophoreInputHandler
(
CDPL.Pharm
)
CDFGZPharmacophoreReader
(
CDPL.Pharm
)
CDFGZReactionInputHandler
(
CDPL.Chem
)
CDFGZReactionOutputHandler
(
CDPL.Chem
)
CDFGZReactionReader
(
CDPL.Chem
)
CDFGZReactionWriter
(
CDPL.Chem
)
CDFMolecularGraphOutputHandler
(
CDPL.Chem
)
CDFMolecularGraphWriter
(
CDPL.Chem
)
CDFMoleculeInputHandler
(
CDPL.Chem
)
CDFMoleculeReader
(
CDPL.Chem
)
CDFPharmacophoreInputHandler
(
CDPL.Pharm
)
CDFPharmacophoreReader
(
CDPL.Pharm
)
CDFReactionInputHandler
(
CDPL.Chem
)
CDFReactionOutputHandler
(
CDPL.Chem
)
CDFReactionReader
(
CDPL.Chem
)
CDFReactionWriter
(
CDPL.Chem
)
StructureGridView2D.Cell
(
CDPL.Vis
)
CFLMoleculeInputHandler
(
CDPL.ConfGen
)
CFLMoleculeReader
(
CDPL.ConfGen
)
ChEMBLStandardizer.ChangeFlags
(
CDPL.Chem
)
ChEMBLStandardizer
(
CDPL.Chem
)
CIPConfigurationLabeler
(
CDPL.Chem
)
CIPDescriptor
(
CDPL.Chem
)
CIPPriorityCalculator
(
CDPL.Chem
)
CircularFingerprintGenerator
(
CDPL.Descr
)
ClipPathPrimitive2D
(
CDPL.Vis
)
CMLBZ2MolecularGraphOutputHandler
(
CDPL.Chem
)
CMLBZ2MolecularGraphWriter
(
CDPL.Chem
)
CMLBZ2MoleculeInputHandler
(
CDPL.Chem
)
CMLBZ2MoleculeReader
(
CDPL.Chem
)
CMLGZMolecularGraphOutputHandler
(
CDPL.Chem
)
CMLGZMolecularGraphWriter
(
CDPL.Chem
)
CMLGZMoleculeInputHandler
(
CDPL.Chem
)
CMLGZMoleculeReader
(
CDPL.Chem
)
CMLMolecularGraphOutputHandler
(
CDPL.Chem
)
CMLMolecularGraphWriter
(
CDPL.Chem
)
CMLMoleculeInputHandler
(
CDPL.Chem
)
CMLMoleculeReader
(
CDPL.Chem
)
Color
(
CDPL.Vis
)
ScreeningSettings.ColorFeatureType
(
CDPL.Shape
)
ColorTable
(
CDPL.Vis
)
ColorTanimotoScore
(
CDPL.Shape
)
ColorTverskyScore
(
CDPL.Shape
)
CommonConnectedSubstructureSearch
(
CDPL.Chem
)
CompleteRingSet
(
CDPL.Chem
)
Reaction.ComponentSequence
(
CDPL.Chem
)
ComponentSet
(
CDPL.Chem
)
CompoundDRegularGridReader
(
CDPL.Grid
)
CompoundDRegularGridSetReader
(
CDPL.Grid
)
CompoundMoleculeReader
(
CDPL.Chem
)
CompoundPharmacophoreReader
(
CDPL.Pharm
)
CompoundReactionReader
(
CDPL.Chem
)
DefaultPharmacophoreGenerator.Configuration
(
CDPL.Pharm
)
ConformerData
(
CDPL.ConfGen
)
ConformerGenerator
(
CDPL.ConfGen
)
ConformerGeneratorSettings
(
CDPL.ConfGen
)
ConformerSamplingMode
(
CDPL.ConfGen
)
ConnectedSubstructureSet
(
CDPL.Chem
)
ConstDGridExpression
(
CDPL.Math
)
ConstDHomogenousCoordsAdapter
(
CDPL.Math
)
ConstDMatrixColumn
(
CDPL.Math
)
ConstDMatrixExpression
(
CDPL.Math
)
ConstDMatrixRange
(
CDPL.Math
)
ConstDMatrixRow
(
CDPL.Math
)
ConstDMatrixSlice
(
CDPL.Math
)
ConstDMatrixTranspose
(
CDPL.Math
)
ConstDQuaternionExpression
(
CDPL.Math
)
ConstDQuaternionVectorAdapter
(
CDPL.Math
)
ConstDVectorExpression
(
CDPL.Math
)
ConstDVectorQuaternionAdapter
(
CDPL.Math
)
ConstDVectorRange
(
CDPL.Math
)
ConstDVectorSlice
(
CDPL.Math
)
ConstFGridExpression
(
CDPL.Math
)
ConstFHomogenousCoordsAdapter
(
CDPL.Math
)
ConstFMatrixColumn
(
CDPL.Math
)
ConstFMatrixExpression
(
CDPL.Math
)
ConstFMatrixRange
(
CDPL.Math
)
ConstFMatrixRow
(
CDPL.Math
)
ConstFMatrixSlice
(
CDPL.Math
)
ConstFMatrixTranspose
(
CDPL.Math
)
ConstFQuaternionExpression
(
CDPL.Math
)
ConstFQuaternionVectorAdapter
(
CDPL.Math
)
ConstFVectorExpression
(
CDPL.Math
)
ConstFVectorQuaternionAdapter
(
CDPL.Math
)
ConstFVectorRange
(
CDPL.Math
)
ConstFVectorSlice
(
CDPL.Math
)
ConstLHomogenousCoordsAdapter
(
CDPL.Math
)
ConstLMatrixColumn
(
CDPL.Math
)
ConstLMatrixExpression
(
CDPL.Math
)
ConstLMatrixRange
(
CDPL.Math
)
ConstLMatrixRow
(
CDPL.Math
)
ConstLMatrixSlice
(
CDPL.Math
)
ConstLMatrixTranspose
(
CDPL.Math
)
ConstLowerTriangularDMatrixAdapter
(
CDPL.Math
)
ConstLowerTriangularFMatrixAdapter
(
CDPL.Math
)
ConstLowerTriangularLMatrixAdapter
(
CDPL.Math
)
ConstLowerTriangularULMatrixAdapter
(
CDPL.Math
)
ConstLQuaternionExpression
(
CDPL.Math
)
ConstLQuaternionVectorAdapter
(
CDPL.Math
)
ConstLVectorExpression
(
CDPL.Math
)
ConstLVectorQuaternionAdapter
(
CDPL.Math
)
ConstLVectorRange
(
CDPL.Math
)
ConstLVectorSlice
(
CDPL.Math
)
ConstULHomogenousCoordsAdapter
(
CDPL.Math
)
ConstULMatrixColumn
(
CDPL.Math
)
ConstULMatrixExpression
(
CDPL.Math
)
ConstULMatrixRange
(
CDPL.Math
)
ConstULMatrixRow
(
CDPL.Math
)
ConstULMatrixSlice
(
CDPL.Math
)
ConstULMatrixTranspose
(
CDPL.Math
)
ConstULQuaternionExpression
(
CDPL.Math
)
ConstULQuaternionVectorAdapter
(
CDPL.Math
)
ConstULVectorExpression
(
CDPL.Math
)
ConstULVectorQuaternionAdapter
(
CDPL.Math
)
ConstULVectorRange
(
CDPL.Math
)
ConstULVectorSlice
(
CDPL.Math
)
ConstUnitLowerTriangularDMatrixAdapter
(
CDPL.Math
)
ConstUnitLowerTriangularFMatrixAdapter
(
CDPL.Math
)
ConstUnitLowerTriangularLMatrixAdapter
(
CDPL.Math
)
ConstUnitLowerTriangularULMatrixAdapter
(
CDPL.Math
)
ConstUnitUpperTriangularDMatrixAdapter
(
CDPL.Math
)
ConstUnitUpperTriangularFMatrixAdapter
(
CDPL.Math
)
ConstUnitUpperTriangularLMatrixAdapter
(
CDPL.Math
)
ConstUnitUpperTriangularULMatrixAdapter
(
CDPL.Math
)
ConstUpperTriangularDMatrixAdapter
(
CDPL.Math
)
ConstUpperTriangularFMatrixAdapter
(
CDPL.Math
)
ConstUpperTriangularLMatrixAdapter
(
CDPL.Math
)
ConstUpperTriangularULMatrixAdapter
(
CDPL.Math
)
ControlParameter
(
CDPL.Pharm
)
ControlParameter
(
CDPL.Vis
)
ControlParameter
(
CDPL.Biomol
)
ControlParameter
(
CDPL.Grid
)
ControlParameter
(
CDPL.Chem
)
ControlParameter
(
CDPL.ConfGen
)
ControlParameterContainer
(
CDPL.Base
)
ControlParameterDefault
(
CDPL.Chem
)
ControlParameterDefault
(
CDPL.ConfGen
)
ControlParameterDefault
(
CDPL.Biomol
)
ControlParameterDefault
(
CDPL.Grid
)
ControlParameterDefault
(
CDPL.Pharm
)
ControlParameterDefault
(
CDPL.Vis
)
ControlParameterList
(
CDPL.Base
)
CoordinationGeometry
(
CDPL.MolProp
)
CyclicSubstructure
(
CDPL.Chem
)
D
DArray
(
CDPL.Util
)
DataFormat
(
CDPL.Base
)
DataFormat
(
CDPL.Biomol
)
DataFormat
(
CDPL.Chem
)
DataFormat
(
CDPL.Vis
)
DataFormat
(
CDPL.Pharm
)
DataFormat
(
CDPL.Grid
)
DataFormat
(
CDPL.ConfGen
)
DataIOBase
(
CDPL.Base
)
DRegularSpatialGrid.DataMode
(
CDPL.Math
)
FRegularSpatialGrid.DataMode
(
CDPL.Math
)
PathFingerprintGenerator.DefAtomDescriptorFunctor
(
CDPL.Descr
)
HashCodeCalculator.DefAtomHashSeedFunctor
(
CDPL.Chem
)
CircularFingerprintGenerator.DefAtomIdentifierFunctor
(
CDPL.Descr
)
DefaultInteractionAnalyzer
(
CDPL.Pharm
)
DefaultMultiConfMoleculeInputProcessor
(
CDPL.Chem
)
DefaultPharmacophoreGenerator
(
CDPL.Pharm
)
DefaultTautomerGenerator
(
CDPL.Chem
)
PathFingerprintGenerator.DefBondDescriptorFunctor
(
CDPL.Descr
)
HashCodeCalculator.DefBondHashSeedFunctor
(
CDPL.Chem
)
CircularFingerprintGenerator.DefBondIdentifierFunctor
(
CDPL.Descr
)
DG2DCoordinatesGenerator
(
CDPL.Util
)
DG3DCoordinatesGenerator
(
CDPL.Util
)
DGConstraintGenerator
(
CDPL.ConfGen
)
DGConstraintGeneratorSettings
(
CDPL.ConfGen
)
DGrid
(
CDPL.Math
)
DGridExpression
(
CDPL.Math
)
DGStructureGenerator
(
CDPL.ConfGen
)
DGStructureGeneratorSettings
(
CDPL.ConfGen
)
DHomogenousCoordsAdapter
(
CDPL.Math
)
DIdentityMatrix
(
CDPL.Math
)
DG2DCoordinatesGenerator.DistanceConstraint
(
CDPL.Util
)
DG3DCoordinatesGenerator.DistanceConstraint
(
CDPL.Util
)
DG2DCoordinatesGenerator.DistanceConstraintList
(
CDPL.Util
)
DG3DCoordinatesGenerator.DistanceConstraintList
(
CDPL.Util
)
DKabschAlgorithm
(
CDPL.Math
)
DMatrix
(
CDPL.Math
)
DMatrixColumn
(
CDPL.Math
)
DMatrixExpression
(
CDPL.Math
)
DMatrixRange
(
CDPL.Math
)
DMatrixRow
(
CDPL.Math
)
DMatrixSlice
(
CDPL.Math
)
DMatrixTranspose
(
CDPL.Math
)
DMLRModel
(
CDPL.Math
)
DoubleAlignmentResultFunctor
(
CDPL.Shape
)
DoubleAtom2Functor
(
CDPL.Chem
)
DoubleAtom2UInt2Functor
(
CDPL.Chem
)
DoubleAtom2UIntFunctor
(
CDPL.Chem
)
DoubleAtomFunctor
(
CDPL.Chem
)
DoubleDouble2Functor
(
CDPL.Pharm
)
DoubleDoubleFunctor
(
CDPL.Pharm
)
DoubleDVector2Functor
(
CDPL.Math
)
DoubleDVectorFunctor
(
CDPL.Chem
)
DoubleDVectorFunctor
(
CDPL.Math
)
DoubleEntity3D2Functor
(
CDPL.Chem
)
DoubleEntity3DFunctor
(
CDPL.Chem
)
DoubleFeature2Functor
(
CDPL.Pharm
)
DoubleFeature2Matrix4DFunctor
(
CDPL.Pharm
)
DoubleFeature2UIntFunctor
(
CDPL.Pharm
)
DoubleFeatureFunctor
(
CDPL.Pharm
)
DoubleSearchHitFunctor
(
CDPL.Pharm
)
DoubleVector2DArray2Functor
(
CDPL.Math
)
DoubleVector2DArrayFunctor
(
CDPL.Math
)
DoubleVector3D2AtomFunctor
(
CDPL.Chem
)
DoubleVector3DArray2Functor
(
CDPL.Math
)
DoubleVector3DArrayFunctor
(
CDPL.Math
)
DoubleVector3DFeatureFunctor
(
CDPL.GRAIL
)
DQuaternion
(
CDPL.Math
)
DQuaternionExpression
(
CDPL.Math
)
DQuaternionVectorAdapter
(
CDPL.Math
)
DRealQuaternion
(
CDPL.Math
)
DRegularGrid
(
CDPL.Grid
)
DRegularGridInputHandler
(
CDPL.Grid
)
DRegularGridIOManager
(
CDPL.Grid
)
DRegularGridOutputHandler
(
CDPL.Grid
)
DRegularGridReader
(
CDPL.Grid
)
DRegularGridReaderBase
(
CDPL.Grid
)
DRegularGridSet
(
CDPL.Grid
)
DRegularGridSetInputHandler
(
CDPL.Grid
)
DRegularGridSetIOManager
(
CDPL.Grid
)
DRegularGridSetOutputHandler
(
CDPL.Grid
)
DRegularGridSetReader
(
CDPL.Grid
)
DRegularGridSetReaderBase
(
CDPL.Grid
)
DRegularGridSetWriter
(
CDPL.Grid
)
DRegularGridSetWriterBase
(
CDPL.Grid
)
DRegularGridWriter
(
CDPL.Grid
)
DRegularGridWriterBase
(
CDPL.Grid
)
DRegularSpatialGrid
(
CDPL.Math
)
DRotationMatrix
(
CDPL.Math
)
DScalarGrid
(
CDPL.Math
)
DScalarMatrix
(
CDPL.Math
)
DScalarVector
(
CDPL.Math
)
DScalingMatrix
(
CDPL.Math
)
DSpatialGrid
(
CDPL.Grid
)
DTranslationMatrix
(
CDPL.Math
)
DUnitVector
(
CDPL.Math
)
DVector
(
CDPL.Math
)
DVectorBFGSMinimizer
(
CDPL.Math
)
DVectorExpression
(
CDPL.Math
)
DVectorQuaternionAdapter
(
CDPL.Math
)
DVectorRange
(
CDPL.Math
)
DVectorSlice
(
CDPL.Math
)
DZeroGrid
(
CDPL.Math
)
DZeroMatrix
(
CDPL.Math
)
DZeroVector
(
CDPL.Math
)
E
ElasticPotential
(
CDPL.ForceField
)
ElasticPotentialList
(
CDPL.ForceField
)
ElectronSystem
(
CDPL.Chem
)
ElectronSystemList
(
CDPL.Chem
)
GaussianShape.Element
(
CDPL.Shape
)
ElementHistogram
(
CDPL.MolProp
)
GRAILDescriptorCalculator.ElementIndex
(
CDPL.GRAIL
)
GRAILXDescriptorCalculator.ElementIndex
(
CDPL.GRAIL
)
EllipsePrimitive2D
(
CDPL.Vis
)
Entity3D
(
CDPL.Chem
)
Entity3DContainer
(
CDPL.Chem
)
Entity3DMapping
(
CDPL.Chem
)
Entity3DProperty
(
CDPL.Chem
)
MMFF94BondStretchingParameterTable.Entry
(
CDPL.ForceField
)
UFFAtomTypePropertyTable.Entry
(
CDPL.ForceField
)
MMFF94VanDerWaalsParameterTable.Entry
(
CDPL.ForceField
)
MMFF94TorsionParameterTable.Entry
(
CDPL.ForceField
)
MMFF94SymbolicToNumericAtomTypeMap.Entry
(
CDPL.ForceField
)
MMFF94SymbolicAtomTypePatternTable.Entry
(
CDPL.ForceField
)
MMFF94StretchBendParameterTable.Entry
(
CDPL.ForceField
)
MMFF94PrimaryToParameterAtomTypeMap.Entry
(
CDPL.ForceField
)
MMFF94PartialBondChargeIncrementTable.Entry
(
CDPL.ForceField
)
MMFF94OutOfPlaneBendingParameterTable.Entry
(
CDPL.ForceField
)
MMFF94HeavyToHydrogenAtomTypeMap.Entry
(
CDPL.ForceField
)
MMFF94FormalAtomChargeDefinitionTable.Entry
(
CDPL.ForceField
)
MMFF94DefaultStretchBendParameterTable.Entry
(
CDPL.ForceField
)
MMFF94BondStretchingRuleParameterTable.Entry
(
CDPL.ForceField
)
MMFF94BondChargeIncrementTable.Entry
(
CDPL.ForceField
)
MMFF94AtomTypePropertyTable.Entry
(
CDPL.ForceField
)
MMFF94AromaticAtomTypeDefinitionTable.Entry
(
CDPL.ForceField
)
MMFF94AngleBendingParameterTable.Entry
(
CDPL.ForceField
)
AtomDictionary.Entry
(
CDPL.Chem
)
ResidueDictionary.Entry
(
CDPL.Biomol
)
enum
(Boost.Python)
Error
(
CDPL.ForceField
)
ExactGaussianShapeOverlapFunction
(
CDPL.Shape
)
Exception
(
CDPL.Base
)
FragmentGenerator.ExcludePattern
(
CDPL.Chem
)
ExtendedSSSR
(
CDPL.Chem
)
F
FastGaussianShapeAlignment
(
CDPL.Shape
)
FastGaussianShapeOverlapFunction
(
CDPL.Shape
)
Feature
(
CDPL.Pharm
)
Feature3DCoordinatesFunction
(
CDPL.Pharm
)
FeatureAutoCorrelation3DVectorCalculator
(
CDPL.Descr
)
FeatureContainer
(
CDPL.Pharm
)
FeatureContainerIOManager
(
CDPL.Pharm
)
FeatureContainerOutputHandler
(
CDPL.Pharm
)
FeatureContainerProperty
(
CDPL.Pharm
)
FeatureContainerPropertyDefault
(
CDPL.Pharm
)
FeatureContainerWriter
(
CDPL.Pharm
)
FeatureContainerWriterBase
(
CDPL.Pharm
)
FeatureDistanceConstraint
(
CDPL.Pharm
)
FeatureDistanceScore
(
CDPL.Pharm
)
NPoint2DPharmacophoreFingerprintGenerator.FeatureDistanceType
(
CDPL.Descr
)
FeatureGenerator
(
CDPL.Pharm
)
FeatureGeometry
(
CDPL.Pharm
)
FeatureGeometryMatchFunctor
(
CDPL.Pharm
)
FeatureInteractionScore
(
CDPL.Pharm
)
FeatureInteractionScoreCombiner
(
CDPL.Pharm
)
FeatureInteractionScoreGridCalculator
(
CDPL.GRAIL
)
FeatureMapping
(
CDPL.Pharm
)
FeaturePairDistanceMatchFunctor
(
CDPL.Pharm
)
FeaturePositionMatchFunctor
(
CDPL.Pharm
)
FeatureProperty
(
CDPL.Pharm
)
FeaturePropertyDefault
(
CDPL.Pharm
)
FeatureRDFCodeCalculator
(
CDPL.Descr
)
FeatureSet
(
CDPL.Pharm
)
FeatureType
(
CDPL.GRAIL
)
FeatureType
(
CDPL.Pharm
)
FeatureTypeHistogram
(
CDPL.Pharm
)
FeatureTypeMatchFunctor
(
CDPL.Pharm
)
FGrid
(
CDPL.Math
)
FGridExpression
(
CDPL.Math
)
FHomogenousCoordsAdapter
(
CDPL.Math
)
FIdentityMatrix
(
CDPL.Math
)
FileCDFBZ2DRegularGridReader
(
CDPL.Grid
)
FileCDFBZ2DRegularGridSetReader
(
CDPL.Grid
)
FileCDFBZ2DRegularGridSetWriter
(
CDPL.Grid
)
FileCDFBZ2DRegularGridWriter
(
CDPL.Grid
)
FileCDFBZ2FeatureContainerWriter
(
CDPL.Pharm
)
FileCDFBZ2MolecularGraphWriter
(
CDPL.Chem
)
FileCDFBZ2MoleculeReader
(
CDPL.Chem
)
FileCDFBZ2PharmacophoreReader
(
CDPL.Pharm
)
FileCDFBZ2ReactionReader
(
CDPL.Chem
)
FileCDFBZ2ReactionWriter
(
CDPL.Chem
)
FileCDFDRegularGridReader
(
CDPL.Grid
)
FileCDFDRegularGridSetReader
(
CDPL.Grid
)
FileCDFDRegularGridSetWriter
(
CDPL.Grid
)
FileCDFDRegularGridWriter
(
CDPL.Grid
)
FileCDFFeatureContainerWriter
(
CDPL.Pharm
)
FileCDFGZDRegularGridReader
(
CDPL.Grid
)
FileCDFGZDRegularGridSetReader
(
CDPL.Grid
)
FileCDFGZDRegularGridSetWriter
(
CDPL.Grid
)
FileCDFGZDRegularGridWriter
(
CDPL.Grid
)
FileCDFGZFeatureContainerWriter
(
CDPL.Pharm
)
FileCDFGZMolecularGraphWriter
(
CDPL.Chem
)
FileCDFGZMoleculeReader
(
CDPL.Chem
)
FileCDFGZPharmacophoreReader
(
CDPL.Pharm
)
FileCDFGZReactionReader
(
CDPL.Chem
)
FileCDFGZReactionWriter
(
CDPL.Chem
)
FileCDFMolecularGraphWriter
(
CDPL.Chem
)
FileCDFMoleculeReader
(
CDPL.Chem
)
FileCDFPharmacophoreReader
(
CDPL.Pharm
)
FileCDFReactionReader
(
CDPL.Chem
)
FileCDFReactionWriter
(
CDPL.Chem
)
FileCFLMoleculeReader
(
CDPL.ConfGen
)
FileCMLBZ2MolecularGraphWriter
(
CDPL.Chem
)
FileCMLBZ2MoleculeReader
(
CDPL.Chem
)
FileCMLGZMolecularGraphWriter
(
CDPL.Chem
)
FileCMLGZMoleculeReader
(
CDPL.Chem
)
FileCMLMolecularGraphWriter
(
CDPL.Chem
)
FileCMLMoleculeReader
(
CDPL.Chem
)
DataFormat.FileExtensionSequence
(
CDPL.Base
)
FileINCHIMolecularGraphWriter
(
CDPL.Chem
)
FileINCHIMoleculeReader
(
CDPL.Chem
)
FileIOStream
(
CDPL.Base
)
FileJMEMolecularGraphWriter
(
CDPL.Chem
)
FileJMEMoleculeReader
(
CDPL.Chem
)
FileJMEReactionReader
(
CDPL.Chem
)
FileJMEReactionWriter
(
CDPL.Chem
)
FileMMCIFBZ2MolecularGraphWriter
(
CDPL.Biomol
)
FileMMCIFBZ2MoleculeReader
(
CDPL.Biomol
)
FileMMCIFGZMolecularGraphWriter
(
CDPL.Biomol
)
FileMMCIFGZMoleculeReader
(
CDPL.Biomol
)
FileMMCIFMolecularGraphWriter
(
CDPL.Biomol
)
FileMMCIFMoleculeReader
(
CDPL.Biomol
)
FileMMTFBZ2MolecularGraphWriter
(
CDPL.Biomol
)
FileMMTFBZ2MoleculeReader
(
CDPL.Biomol
)
FileMMTFGZMolecularGraphWriter
(
CDPL.Biomol
)
FileMMTFGZMoleculeReader
(
CDPL.Biomol
)
FileMMTFMolecularGraphWriter
(
CDPL.Biomol
)
FileMMTFMoleculeReader
(
CDPL.Biomol
)
FileMOL2BZ2MolecularGraphWriter
(
CDPL.Chem
)
FileMOL2BZ2MoleculeReader
(
CDPL.Chem
)
FileMOL2GZMolecularGraphWriter
(
CDPL.Chem
)
FileMOL2GZMoleculeReader
(
CDPL.Chem
)
FileMOL2MolecularGraphWriter
(
CDPL.Chem
)
FileMOL2MoleculeReader
(
CDPL.Chem
)
FileMOLMolecularGraphWriter
(
CDPL.Chem
)
FileMOLMoleculeReader
(
CDPL.Chem
)
FilePDBBZ2MolecularGraphWriter
(
CDPL.Biomol
)
FilePDBBZ2MoleculeReader
(
CDPL.Biomol
)
FilePDBGZMolecularGraphWriter
(
CDPL.Biomol
)
FilePDBGZMoleculeReader
(
CDPL.Biomol
)
FilePDBMolecularGraphWriter
(
CDPL.Biomol
)
FilePDBMoleculeReader
(
CDPL.Biomol
)
FilePDFMolecularGraphWriter
(
CDPL.Vis
)
FilePDFReactionWriter
(
CDPL.Vis
)
FilePMLFeatureContainerWriter
(
CDPL.Pharm
)
FilePMLPharmacophoreReader
(
CDPL.Pharm
)
FilePNGMolecularGraphWriter
(
CDPL.Vis
)
FilePNGReactionWriter
(
CDPL.Vis
)
FilePSMolecularGraphWriter
(
CDPL.Vis
)
FilePSReactionWriter
(
CDPL.Vis
)
FileRDFBZ2ReactionReader
(
CDPL.Chem
)
FileRDFBZ2ReactionWriter
(
CDPL.Chem
)
FileRDFGZReactionReader
(
CDPL.Chem
)
FileRDFGZReactionWriter
(
CDPL.Chem
)
FileRDFReactionReader
(
CDPL.Chem
)
FileRDFReactionWriter
(
CDPL.Chem
)
FileRXNReactionWriter
(
CDPL.Chem
)
FileScreeningHitCollector
(
CDPL.Pharm
)
FileSDFBZ2MolecularGraphWriter
(
CDPL.Chem
)
FileSDFBZ2MoleculeReader
(
CDPL.Chem
)
FileSDFGZMolecularGraphWriter
(
CDPL.Chem
)
FileSDFGZMoleculeReader
(
CDPL.Chem
)
FileSDFMolecularGraphWriter
(
CDPL.Chem
)
FileSDFMoleculeReader
(
CDPL.Chem
)
FileSMARTSMolecularGraphWriter
(
CDPL.Chem
)
FileSMARTSMoleculeReader
(
CDPL.Chem
)
FileSMARTSReactionReader
(
CDPL.Chem
)
FileSMARTSReactionWriter
(
CDPL.Chem
)
FileSMILESBZ2MolecularGraphWriter
(
CDPL.Chem
)
FileSMILESBZ2MoleculeReader
(
CDPL.Chem
)
FileSMILESBZ2ReactionReader
(
CDPL.Chem
)
FileSMILESBZ2ReactionWriter
(
CDPL.Chem
)
FileSMILESGZMolecularGraphWriter
(
CDPL.Chem
)
FileSMILESGZMoleculeReader
(
CDPL.Chem
)
FileSMILESGZReactionReader
(
CDPL.Chem
)
FileSMILESGZReactionWriter
(
CDPL.Chem
)
FileSMILESMolecularGraphWriter
(
CDPL.Chem
)
FileSMILESMoleculeReader
(
CDPL.Chem
)
FileSMILESReactionReader
(
CDPL.Chem
)
FileSMILESReactionWriter
(
CDPL.Chem
)
FileSVGMolecularGraphWriter
(
CDPL.Vis
)
FileSVGReactionWriter
(
CDPL.Vis
)
FileXYZBZ2MolecularGraphWriter
(
CDPL.Chem
)
FileXYZBZ2MoleculeReader
(
CDPL.Chem
)
FileXYZGZMolecularGraphWriter
(
CDPL.Chem
)
FileXYZGZMoleculeReader
(
CDPL.Chem
)
FileXYZMolecularGraphWriter
(
CDPL.Chem
)
FileXYZMoleculeReader
(
CDPL.Chem
)
Path2D.FillRule
(
CDPL.Vis
)
FKabschAlgorithm
(
CDPL.Math
)
ProtonationStateStandardizer.Flavor
(
CDPL.Chem
)
FloatFVector2Functor
(
CDPL.Math
)
FloatFVectorFunctor
(
CDPL.Math
)
FloatVector2FArray2Functor
(
CDPL.Math
)
FloatVector2FArrayFunctor
(
CDPL.Math
)
FloatVector3FArray2Functor
(
CDPL.Math
)
FloatVector3FArrayFunctor
(
CDPL.Math
)
FMatrix
(
CDPL.Math
)
FMatrixColumn
(
CDPL.Math
)
FMatrixExpression
(
CDPL.Math
)
FMatrixRange
(
CDPL.Math
)
FMatrixRow
(
CDPL.Math
)
FMatrixSlice
(
CDPL.Math
)
FMatrixTranspose
(
CDPL.Math
)
FMLRModel
(
CDPL.Math
)
Font
(
CDPL.Vis
)
FontMetrics
(
CDPL.Vis
)
ForceFieldType
(
CDPL.ConfGen
)
FQuaternion
(
CDPL.Math
)
FQuaternionExpression
(
CDPL.Math
)
FQuaternionVectorAdapter
(
CDPL.Math
)
Fragment
(
CDPL.Chem
)
FragmentAssembler
(
CDPL.ConfGen
)
FragmentAssemblerSettings
(
CDPL.ConfGen
)
FragmentGenerator.FragmentationRule
(
CDPL.Chem
)
FragmentConformerGenerator
(
CDPL.ConfGen
)
FragmentConformerGeneratorSettings
(
CDPL.ConfGen
)
FragmentGenerator
(
CDPL.Chem
)
FragmentLibrary
(
CDPL.ConfGen
)
FragmentLibraryEntry
(
CDPL.ConfGen
)
FragmentLibraryGenerator
(
CDPL.ConfGen
)
FragmentGenerator.FragmentLink
(
CDPL.Chem
)
FragmentList
(
CDPL.Chem
)
FragmentConformerGeneratorSettings.FragmentSettings
(
CDPL.ConfGen
)
FragmentType
(
CDPL.ConfGen
)
FRealQuaternion
(
CDPL.Math
)
FRegularGrid
(
CDPL.Grid
)
FRegularGridSet
(
CDPL.Grid
)
FRegularSpatialGrid
(
CDPL.Math
)
FRotationMatrix
(
CDPL.Math
)
FScalarGrid
(
CDPL.Math
)
FScalarMatrix
(
CDPL.Math
)
FScalarVector
(
CDPL.Math
)
FScalingMatrix
(
CDPL.Math
)
FSpatialGrid
(
CDPL.Grid
)
FTranslationMatrix
(
CDPL.Math
)
FUnitVector
(
CDPL.Math
)
FVector
(
CDPL.Math
)
FVectorBFGSMinimizer
(
CDPL.Math
)
FVectorExpression
(
CDPL.Math
)
FVectorQuaternionAdapter
(
CDPL.Math
)
FVectorRange
(
CDPL.Math
)
FVectorSlice
(
CDPL.Math
)
FZeroGrid
(
CDPL.Math
)
FZeroMatrix
(
CDPL.Math
)
FZeroVector
(
CDPL.Math
)
G
GaussianShape
(
CDPL.Shape
)
GaussianShapeAlignment
(
CDPL.Shape
)
GaussianShapeAlignmentStartGenerator
(
CDPL.Shape
)
GaussianShapeFunction
(
CDPL.Shape
)
GaussianShapeFunctionAlignment
(
CDPL.Shape
)
GaussianShapeGenerator
(
CDPL.Shape
)
GaussianShapeOverlapFunction
(
CDPL.Shape
)
GaussianShapeSet
(
CDPL.Shape
)
GeneralizedBellAtomDensity
(
CDPL.GRAIL
)
GenericHydrogen13ShiftTautomerization
(
CDPL.Chem
)
GenericHydrogen15ShiftTautomerization
(
CDPL.Chem
)
GRAILDataSetGenerator
(
CDPL.GRAIL
)
GRAILDescriptorCalculator
(
CDPL.GRAIL
)
GRAILXDescriptorCalculator
(
CDPL.GRAIL
)
GraphicsPrimitive2D
(
CDPL.Vis
)
GZipIOStream
(
CDPL.Util
)
GZipIStream
(
CDPL.Util
)
GZipOStream
(
CDPL.Util
)
H
HashCodeCalculator
(
CDPL.Chem
)
HBondAcceptorAtomType
(
CDPL.MolProp
)
HBondAcceptorAtomTyper
(
CDPL.MolProp
)
HBondAcceptorFeatureGenerator
(
CDPL.Pharm
)
HBondDonorAtomType
(
CDPL.MolProp
)
HBondDonorAtomTyper
(
CDPL.MolProp
)
HBondDonorFeatureGenerator
(
CDPL.Pharm
)
HBondingInteractionConstraint
(
CDPL.Pharm
)
HBondingInteractionScore
(
CDPL.Pharm
)
MMFF94VanDerWaalsInteraction.HDonorAcceptorType
(
CDPL.ForceField
)
HierarchyView
(
CDPL.Biomol
)
HierarchyViewChain
(
CDPL.Biomol
)
HierarchyViewFragment
(
CDPL.Biomol
)
HierarchyViewModel
(
CDPL.Biomol
)
HierarchyViewNode
(
CDPL.Biomol
)
ScreeningProcessor.HitReportMode
(
CDPL.Pharm
)
HybridizationState
(
CDPL.Chem
)
Hydrogen3DCoordinatesCalculator
(
CDPL.Chem
)
HydrophobicAtomFeatureGenerator
(
CDPL.Pharm
)
HydrophobicFeatureGenerator
(
CDPL.Pharm
)
HydrophobicInteractionConstraint
(
CDPL.Pharm
)
HydrophobicInteractionScore
(
CDPL.Pharm
)
I
ImineEnamineTautomerization
(
CDPL.Chem
)
INCHIMolecularGraphOutputHandler
(
CDPL.Chem
)
INCHIMolecularGraphWriter
(
CDPL.Chem
)
INCHIMoleculeInputHandler
(
CDPL.Chem
)
INCHIMoleculeReader
(
CDPL.Chem
)
INCHIReturnCode
(
CDPL.Chem
)
IndexError
(
CDPL.Base
)
ReactionIOManager.InputHandlerSequence
(
CDPL.Chem
)
PharmacophoreIOManager.InputHandlerSequence
(
CDPL.Pharm
)
FeatureContainerIOManager.InputHandlerSequence
(
CDPL.Pharm
)
DRegularGridSetIOManager.InputHandlerSequence
(
CDPL.Grid
)
DRegularGridIOManager.InputHandlerSequence
(
CDPL.Grid
)
MoleculeIOManager.InputHandlerSequence
(
CDPL.Chem
)
MolecularGraphIOManager.InputHandlerSequence
(
CDPL.Chem
)
InteractionAnalyzer
(
CDPL.Pharm
)
InteractionConstraintConnector
(
CDPL.Pharm
)
InteractionFilterFunction2
(
CDPL.ForceField
)
InteractionFilterFunction3
(
CDPL.ForceField
)
InteractionFilterFunction4
(
CDPL.ForceField
)
InteractionPharmacophoreGenerator
(
CDPL.Pharm
)
InteractionType
(
CDPL.ForceField
)
IOError
(
CDPL.Base
)
IonicInteractionConstraint
(
CDPL.Pharm
)
IonicInteractionScore
(
CDPL.Pharm
)
IOStream
(
CDPL.Base
)
IStream
(
CDPL.Base
)
MMCIFData.Item
(
CDPL.Biomol
)
ItemNotFound
(
CDPL.Base
)
J
JMEMolecularGraphOutputHandler
(
CDPL.Chem
)
JMEMolecularGraphWriter
(
CDPL.Chem
)
JMEMoleculeInputHandler
(
CDPL.Chem
)
JMEMoleculeReader
(
CDPL.Chem
)
JMEReactionInputHandler
(
CDPL.Chem
)
JMEReactionOutputHandler
(
CDPL.Chem
)
JMEReactionReader
(
CDPL.Chem
)
JMEReactionWriter
(
CDPL.Chem
)
Pen.JoinStyle
(
CDPL.Vis
)
K
KekuleStructureCalculator
(
CDPL.Chem
)
KeteneYnolTautomerization
(
CDPL.Chem
)
KetoEnolTautomerization
(
CDPL.Chem
)
L
LactamLactimTautomerization
(
CDPL.Chem
)
LArray
(
CDPL.Util
)
LayoutDirection
(
CDPL.Vis
)
LayoutStyle
(
CDPL.Vis
)
LHomogenousCoordsAdapter
(
CDPL.Math
)
LIdentityMatrix
(
CDPL.Math
)
Line2D
(
CDPL.Vis
)
LinePrimitive2D
(
CDPL.Vis
)
LineSegmentListPrimitive2D
(
CDPL.Vis
)
Pen.LineStyle
(
CDPL.Vis
)
LMatrix
(
CDPL.Math
)
LMatrixColumn
(
CDPL.Math
)
LMatrixExpression
(
CDPL.Math
)
LMatrixRange
(
CDPL.Math
)
LMatrixRow
(
CDPL.Math
)
LMatrixSlice
(
CDPL.Math
)
LMatrixTranspose
(
CDPL.Math
)
LogMessageCallbackFunction
(
CDPL.ConfGen
)
LogSCalculator
(
CDPL.MolProp
)
LookupKey
(
CDPL.Base
)
Lower
(
CDPL.Math
)
LQuaternion
(
CDPL.Math
)
LQuaternionExpression
(
CDPL.Math
)
LQuaternionVectorAdapter
(
CDPL.Math
)
LRealQuaternion
(
CDPL.Math
)
LRotationMatrix
(
CDPL.Math
)
LScalarMatrix
(
CDPL.Math
)
LScalarVector
(
CDPL.Math
)
LScalingMatrix
(
CDPL.Math
)
LTranslationMatrix
(
CDPL.Math
)
LUnitVector
(
CDPL.Math
)
LVector
(
CDPL.Math
)
LVectorExpression
(
CDPL.Math
)
LVectorQuaternionAdapter
(
CDPL.Math
)
LVectorRange
(
CDPL.Math
)
LVectorSlice
(
CDPL.Math
)
LZeroMatrix
(
CDPL.Math
)
LZeroVector
(
CDPL.Math
)
M
MACCSFingerprintGenerator
(
CDPL.Descr
)
MassComposition
(
CDPL.MolProp
)
MatchConstraint
(
CDPL.Chem
)
MatchConstraintList
(
CDPL.Chem
)
Matrix2D
(
CDPL.Math
)
Matrix2F
(
CDPL.Math
)
Matrix2L
(
CDPL.Math
)
Matrix2UL
(
CDPL.Math
)
Matrix3D
(
CDPL.Math
)
Matrix3F
(
CDPL.Math
)
Matrix3L
(
CDPL.Math
)
Matrix3UL
(
CDPL.Math
)
Matrix4D
(
CDPL.Math
)
Matrix4F
(
CDPL.Math
)
Matrix4L
(
CDPL.Math
)
Matrix4UL
(
CDPL.Math
)
MaxCommonAtomSubstructureSearch
(
CDPL.Chem
)
MaxCommonBondSubstructureSearch
(
CDPL.Chem
)
FeatureInteractionScoreGridCalculator.MaxScoreFunctor
(
CDPL.GRAIL
)
MDLDataFormatVersion
(
CDPL.Chem
)
MDLParity
(
CDPL.Chem
)
MHMOPiChargeCalculator
(
CDPL.MolProp
)
MMCIFBZ2MolecularGraphOutputHandler
(
CDPL.Biomol
)
MMCIFBZ2MolecularGraphWriter
(
CDPL.Biomol
)
MMCIFBZ2MoleculeInputHandler
(
CDPL.Biomol
)
MMCIFBZ2MoleculeReader
(
CDPL.Biomol
)
MMCIFData
(
CDPL.Biomol
)
MMCIFDataProcessingFunction
(
CDPL.Biomol
)
MMCIFGZMolecularGraphOutputHandler
(
CDPL.Biomol
)
MMCIFGZMolecularGraphWriter
(
CDPL.Biomol
)
MMCIFGZMoleculeInputHandler
(
CDPL.Biomol
)
MMCIFGZMoleculeReader
(
CDPL.Biomol
)
MMCIFMolecularGraphOutputHandler
(
CDPL.Biomol
)
MMCIFMolecularGraphWriter
(
CDPL.Biomol
)
MMCIFMoleculeInputHandler
(
CDPL.Biomol
)
MMCIFMoleculeReader
(
CDPL.Biomol
)
MMFF94AngleBendingInteraction
(
CDPL.ForceField
)
MMFF94AngleBendingInteractionList
(
CDPL.ForceField
)
MMFF94AngleBendingInteractionParameterizer
(
CDPL.ForceField
)
MMFF94AngleBendingParameterTable
(
CDPL.ForceField
)
MMFF94AromaticAtomTypeDefinitionTable
(
CDPL.ForceField
)
MMFF94AromaticSSSRSubset
(
CDPL.ForceField
)
MMFF94AtomChargeFunction
(
CDPL.ForceField
)
MMFF94AtomTypePropertyTable
(
CDPL.ForceField
)
MMFF94AtomTyper
(
CDPL.ForceField
)
MMFF94BondChargeIncrementTable
(
CDPL.ForceField
)
MMFF94BondStretchingInteraction
(
CDPL.ForceField
)
MMFF94BondStretchingInteractionList
(
CDPL.ForceField
)
MMFF94BondStretchingInteractionParameterizer
(
CDPL.ForceField
)
MMFF94BondStretchingParameterTable
(
CDPL.ForceField
)
MMFF94BondStretchingRuleParameterTable
(
CDPL.ForceField
)
MMFF94BondTypeIndexFunction
(
CDPL.ForceField
)
MMFF94BondTyper
(
CDPL.ForceField
)
MMFF94ChargeCalculator
(
CDPL.ForceField
)
MMFF94DefaultStretchBendParameterTable
(
CDPL.ForceField
)
MMFF94ElectrostaticInteraction
(
CDPL.ForceField
)
MMFF94ElectrostaticInteractionList
(
CDPL.ForceField
)
MMFF94ElectrostaticInteractionParameterizer
(
CDPL.ForceField
)
MMFF94EnergyCalculator
(
CDPL.ForceField
)
MMFF94FormalAtomChargeDefinitionTable
(
CDPL.ForceField
)
MMFF94GradientCalculator
(
CDPL.ForceField
)
MMFF94HeavyToHydrogenAtomTypeMap
(
CDPL.ForceField
)
MMFF94InteractionData
(
CDPL.ForceField
)
MMFF94InteractionParameterizer
(
CDPL.ForceField
)
MMFF94NumericAtomTypeFunction
(
CDPL.ForceField
)
MMFF94OutOfPlaneBendingInteraction
(
CDPL.ForceField
)
MMFF94OutOfPlaneBendingInteractionList
(
CDPL.ForceField
)
MMFF94OutOfPlaneBendingInteractionParameterizer
(
CDPL.ForceField
)
MMFF94OutOfPlaneBendingParameterTable
(
CDPL.ForceField
)
MMFF94ParameterSet
(
CDPL.ForceField
)
MMFF94PartialBondChargeIncrementTable
(
CDPL.ForceField
)
MMFF94PrimaryToParameterAtomTypeMap
(
CDPL.ForceField
)
MMFF94RingSetFunction
(
CDPL.ForceField
)
MMFF94StretchBendInteraction
(
CDPL.ForceField
)
MMFF94StretchBendInteractionList
(
CDPL.ForceField
)
MMFF94StretchBendInteractionParameterizer
(
CDPL.ForceField
)
MMFF94StretchBendParameterTable
(
CDPL.ForceField
)
MMFF94SymbolicAtomTypeFunction
(
CDPL.ForceField
)
MMFF94SymbolicAtomTypePatternTable
(
CDPL.ForceField
)
MMFF94SymbolicToNumericAtomTypeMap
(
CDPL.ForceField
)
MMFF94TorsionInteraction
(
CDPL.ForceField
)
MMFF94TorsionInteractionList
(
CDPL.ForceField
)
MMFF94TorsionInteractionParameterizer
(
CDPL.ForceField
)
MMFF94TorsionParameterTable
(
CDPL.ForceField
)
MMFF94VanDerWaalsAtomParameters
(
CDPL.ForceField
)
MMFF94VanDerWaalsInteraction
(
CDPL.ForceField
)
MMFF94VanDerWaalsInteractionList
(
CDPL.ForceField
)
MMFF94VanDerWaalsInteractionParameterizer
(
CDPL.ForceField
)
MMFF94VanDerWaalsParameterTable
(
CDPL.ForceField
)
MMTFBZ2MolecularGraphOutputHandler
(
CDPL.Biomol
)
MMTFBZ2MolecularGraphWriter
(
CDPL.Biomol
)
MMTFBZ2MoleculeInputHandler
(
CDPL.Biomol
)
MMTFBZ2MoleculeReader
(
CDPL.Biomol
)
MMTFGZMolecularGraphOutputHandler
(
CDPL.Biomol
)
MMTFGZMolecularGraphWriter
(
CDPL.Biomol
)
MMTFGZMoleculeInputHandler
(
CDPL.Biomol
)
MMTFGZMoleculeReader
(
CDPL.Biomol
)
MMTFMolecularGraphOutputHandler
(
CDPL.Biomol
)
MMTFMolecularGraphWriter
(
CDPL.Biomol
)
MMTFMoleculeInputHandler
(
CDPL.Biomol
)
MMTFMoleculeReader
(
CDPL.Biomol
)
MoleculeAutoCorr2DDescriptorCalculator.Mode
(
CDPL.Descr
)
ScreeningDBCreator.Mode
(
CDPL.Pharm
)
TautomerGenerator.Mode
(
CDPL.Chem
)
MOL2BZ2MolecularGraphOutputHandler
(
CDPL.Chem
)
MOL2BZ2MolecularGraphWriter
(
CDPL.Chem
)
MOL2BZ2MoleculeInputHandler
(
CDPL.Chem
)
MOL2BZ2MoleculeReader
(
CDPL.Chem
)
MOL2ChargeType
(
CDPL.Chem
)
MOL2GZMolecularGraphOutputHandler
(
CDPL.Chem
)
MOL2GZMolecularGraphWriter
(
CDPL.Chem
)
MOL2GZMoleculeInputHandler
(
CDPL.Chem
)
MOL2GZMoleculeReader
(
CDPL.Chem
)
MOL2MolecularGraphOutputHandler
(
CDPL.Chem
)
MOL2MolecularGraphWriter
(
CDPL.Chem
)
MOL2MoleculeInputHandler
(
CDPL.Chem
)
MOL2MoleculeReader
(
CDPL.Chem
)
MOL2MoleculeType
(
CDPL.Chem
)
MolecularComplexityCalculator
(
CDPL.Descr
)
MolecularGraph
(
CDPL.Chem
)
MolecularGraphComponentGroupingMatchExpression
(
CDPL.Chem
)
MolecularGraphInputHandler
(
CDPL.Chem
)
MolecularGraphIOManager
(
CDPL.Chem
)
MolecularGraphMatchConstraint
(
CDPL.Chem
)
MolecularGraphMatchExpression
(
CDPL.Chem
)
MolecularGraphMatchExpressionList
(
CDPL.Chem
)
MolecularGraphOutputHandler
(
CDPL.Chem
)
MolecularGraphPointerStringFunctor
(
CDPL.Biomol
)
MolecularGraphProperty
(
CDPL.ForceField
)
MolecularGraphProperty
(
CDPL.Vis
)
MolecularGraphProperty
(
CDPL.Biomol
)
MolecularGraphProperty
(
CDPL.Chem
)
MolecularGraphPropertyDefault
(
CDPL.Vis
)
MolecularGraphPropertyDefault
(
CDPL.Chem
)
MolecularGraphPropertyDefault
(
CDPL.Biomol
)
MolecularGraphWriter
(
CDPL.Chem
)
MolecularGraphWriterBase
(
CDPL.Chem
)
Molecule
(
CDPL.Chem
)
MoleculeAutoCorr2DDescriptorCalculator
(
CDPL.Descr
)
MoleculeAutoCorr3DDescriptorCalculator
(
CDPL.Descr
)
MoleculeInputHandler
(
CDPL.Chem
)
MoleculeIOManager
(
CDPL.Chem
)
MoleculeOutputHandler
(
CDPL.Chem
)
MoleculeRDFDescriptorCalculator
(
CDPL.Descr
)
MoleculeReader
(
CDPL.Chem
)
MoleculeReaderBase
(
CDPL.Chem
)
MolGraphMatchExpressionPtrMolGraphFunctor
(
CDPL.Chem
)
MOLMolecularGraphOutputHandler
(
CDPL.Chem
)
MOLMolecularGraphWriter
(
CDPL.Chem
)
MOLMoleculeInputHandler
(
CDPL.Chem
)
MOLMoleculeReader
(
CDPL.Chem
)
MorganNumberingCalculator
(
CDPL.Chem
)
MultiConfMoleculeInputProcessor
(
CDPL.Chem
)
MultiSubstructureSearch
(
CDPL.Chem
)
N
NegIonizableFeatureGenerator
(
CDPL.Pharm
)
NitroAciTautomerization
(
CDPL.Chem
)
NitrogenEnumerationMode
(
CDPL.ConfGen
)
NitrosoOximeTautomerization
(
CDPL.Chem
)
NOTAtomMatchExpression
(
CDPL.Chem
)
NOTBondMatchExpression
(
CDPL.Chem
)
NOTMolecularGraphMatchExpression
(
CDPL.Chem
)
NOTReactionMatchExpression
(
CDPL.Chem
)
NPoint2DPharmacophoreFingerprintGenerator
(
CDPL.Descr
)
NPoint3DPharmacophoreFingerprintGenerator
(
CDPL.Descr
)
NPointPharmacophoreFingerprintGenerator
(
CDPL.Descr
)
NullPointerException
(
CDPL.Base
)
O
IOStream.OpenMode
(
CDPL.Base
)
OperationFailed
(
CDPL.Base
)
ORAtomMatchExpressionList
(
CDPL.Chem
)
ORBondMatchExpressionList
(
CDPL.Chem
)
ORMolecularGraphMatchExpressionList
(
CDPL.Chem
)
ORReactionMatchExpressionList
(
CDPL.Chem
)
OrthogonalPiPiInteractionConstraint
(
CDPL.Pharm
)
OrthogonalPiPiInteractionScore
(
CDPL.Pharm
)
OStream
(
CDPL.Base
)
MolecularGraphIOManager.OutputHandlerSequence
(
CDPL.Chem
)
MoleculeIOManager.OutputHandlerSequence
(
CDPL.Chem
)
ReactionIOManager.OutputHandlerSequence
(
CDPL.Chem
)
DRegularGridIOManager.OutputHandlerSequence
(
CDPL.Grid
)
DRegularGridSetIOManager.OutputHandlerSequence
(
CDPL.Grid
)
FeatureContainerIOManager.OutputHandlerSequence
(
CDPL.Pharm
)
PharmacophoreIOManager.OutputHandlerSequence
(
CDPL.Pharm
)
P
ParallelPiPiInteractionConstraint
(
CDPL.Pharm
)
ParallelPiPiInteractionScore
(
CDPL.Pharm
)
ParameterizationFailed
(
CDPL.ForceField
)
Path2D
(
CDPL.Vis
)
Path2DConverter
(
CDPL.Vis
)
PathFingerprintGenerator
(
CDPL.Descr
)
PathPrimitive2D
(
CDPL.Vis
)
SubstructureHistogramCalculator.Pattern
(
CDPL.Chem
)
PatternAtomTyper.Pattern
(
CDPL.Chem
)
PatternBasedFeatureGenerator.PatternAtomLabelFlag
(
CDPL.Pharm
)
PatternAtomTyper
(
CDPL.Chem
)
PatternBasedFeatureGenerator
(
CDPL.Pharm
)
PatternBasedTautomerizationRule
(
CDPL.Chem
)
PDBBZ2MolecularGraphOutputHandler
(
CDPL.Biomol
)
PDBBZ2MolecularGraphWriter
(
CDPL.Biomol
)
PDBBZ2MoleculeInputHandler
(
CDPL.Biomol
)
PDBBZ2MoleculeReader
(
CDPL.Biomol
)
PDBData
(
CDPL.Biomol
)
PDBFormatVersion
(
CDPL.Biomol
)
PDBGZMolecularGraphOutputHandler
(
CDPL.Biomol
)
PDBGZMolecularGraphWriter
(
CDPL.Biomol
)
PDBGZMoleculeInputHandler
(
CDPL.Biomol
)
PDBGZMoleculeReader
(
CDPL.Biomol
)
PDBMolecularGraphOutputHandler
(
CDPL.Biomol
)
PDBMolecularGraphWriter
(
CDPL.Biomol
)
PDBMoleculeInputHandler
(
CDPL.Biomol
)
PDBMoleculeReader
(
CDPL.Biomol
)
PDFMolecularGraphOutputHandler
(
CDPL.Vis
)
PDFMolecularGraphWriter
(
CDPL.Vis
)
PDFReactionOutputHandler
(
CDPL.Vis
)
PDFReactionWriter
(
CDPL.Vis
)
Pen
(
CDPL.Vis
)
PEOESigmaChargeCalculator
(
CDPL.MolProp
)
Pharmacophore
(
CDPL.Pharm
)
PharmacophoreAlignment
(
CDPL.Pharm
)
PharmacophoreAutoCorr3DDescriptorCalculator
(
CDPL.Descr
)
PharmacophoreFitScore
(
CDPL.Pharm
)
PharmacophoreFitScreeningScore
(
CDPL.Pharm
)
PharmacophoreGenerator
(
CDPL.Pharm
)
PharmacophoreInputHandler
(
CDPL.Pharm
)
PharmacophoreIOManager
(
CDPL.Pharm
)
PharmacophoreRDFDescriptorCalculator
(
CDPL.Descr
)
PharmacophoreReader
(
CDPL.Pharm
)
PharmacophoreReaderBase
(
CDPL.Pharm
)
PhosphinicAcidTautomerization
(
CDPL.Chem
)
PiElectronSystemList
(
CDPL.Chem
)
PMLFeatureContainerOutputHandler
(
CDPL.Pharm
)
PMLFeatureContainerWriter
(
CDPL.Pharm
)
PMLPharmacophoreInputHandler
(
CDPL.Pharm
)
PMLPharmacophoreReader
(
CDPL.Pharm
)
PNGMolecularGraphOutputHandler
(
CDPL.Vis
)
PNGMolecularGraphWriter
(
CDPL.Vis
)
PNGReactionOutputHandler
(
CDPL.Vis
)
PNGReactionWriter
(
CDPL.Vis
)
PointArray2D
(
CDPL.Vis
)
PointListPrimitive2D
(
CDPL.Vis
)
PolygonPrimitive2D
(
CDPL.Vis
)
PolylinePrimitive2D
(
CDPL.Vis
)
PosIonizableFeatureGenerator
(
CDPL.Pharm
)
PrincipalAxesAlignmentStartGenerator
(
CDPL.Shape
)
PropertyContainer
(
CDPL.Base
)
PropertyValue
(
CDPL.Util
)
PropertyValueProduct
(
CDPL.Util
)
ProtonationStateStandardizer
(
CDPL.Chem
)
PSDMolecularGraphOutputHandler
(
CDPL.Pharm
)
PSDMolecularGraphWriter
(
CDPL.Pharm
)
PSDMoleculeInputHandler
(
CDPL.Pharm
)
PSDMoleculeReader
(
CDPL.Pharm
)
PSDPharmacophoreInputHandler
(
CDPL.Pharm
)
PSDPharmacophoreReader
(
CDPL.Pharm
)
PSDScreeningDBAccessor
(
CDPL.Pharm
)
PSDScreeningDBCreator
(
CDPL.Pharm
)
PSMolecularGraphOutputHandler
(
CDPL.Vis
)
PSMolecularGraphWriter
(
CDPL.Vis
)
PSReactionOutputHandler
(
CDPL.Vis
)
PSReactionWriter
(
CDPL.Vis
)
PubChemFingerprintGenerator
(
CDPL.Descr
)
Q
QtFontMetrics
(
CDPL.Vis.QtBackend
)
QtObjectFactory
(
CDPL.Vis.QtBackend
)
QtRenderer2D
(
CDPL.Vis.QtBackend
)
R
RadicalType
(
CDPL.Chem
)
Range
(
CDPL.Math
)
RangeError
(
CDPL.Base
)
RDFBZ2ReactionInputHandler
(
CDPL.Chem
)
RDFBZ2ReactionOutputHandler
(
CDPL.Chem
)
RDFBZ2ReactionReader
(
CDPL.Chem
)
RDFBZ2ReactionWriter
(
CDPL.Chem
)
RDFGZReactionInputHandler
(
CDPL.Chem
)
RDFGZReactionOutputHandler
(
CDPL.Chem
)
RDFGZReactionReader
(
CDPL.Chem
)
RDFGZReactionWriter
(
CDPL.Chem
)
RDFReactionInputHandler
(
CDPL.Chem
)
RDFReactionOutputHandler
(
CDPL.Chem
)
RDFReactionReader
(
CDPL.Chem
)
RDFReactionWriter
(
CDPL.Chem
)
Reaction
(
CDPL.Chem
)
ReactionAtomMappingMatchExpression
(
CDPL.Chem
)
ReactionCenterStatus
(
CDPL.Chem
)
ReactionComponentGroupingMatchExpression
(
CDPL.Chem
)
ReactionInputHandler
(
CDPL.Chem
)
ReactionIOManager
(
CDPL.Chem
)
ReactionMatchConstraint
(
CDPL.Chem
)
ReactionMatchExpression
(
CDPL.Chem
)
ReactionMatchExpressionList
(
CDPL.Chem
)
ReactionOutputHandler
(
CDPL.Chem
)
ReactionProperty
(
CDPL.Vis
)
ReactionProperty
(
CDPL.Chem
)
ReactionPropertyDefault
(
CDPL.Vis
)
ReactionPropertyDefault
(
CDPL.Chem
)
ReactionReader
(
CDPL.Chem
)
ReactionReaderBase
(
CDPL.Chem
)
ReactionRole
(
CDPL.Chem
)
ReactionSubstructureSearch
(
CDPL.Chem
)
ReactionView2D
(
CDPL.Vis
)
ReactionWriter
(
CDPL.Chem
)
ReactionWriterBase
(
CDPL.Chem
)
Reactor
(
CDPL.Chem
)
RECAPAtomLabel
(
CDPL.Chem
)
RECAPFragmentGenerator
(
CDPL.Chem
)
RECAPRuleID
(
CDPL.Chem
)
PDBData.RecordType
(
CDPL.Biomol
)
Rectangle2D
(
CDPL.Vis
)
StereoDescriptor.ReferenceAtomArray
(
CDPL.Chem
)
ReferenceColorTverskyScore
(
CDPL.Shape
)
ReferenceShapeTverskyScore
(
CDPL.Shape
)
ReferenceTotalOverlapTverskyScore
(
CDPL.Shape
)
ReferenceTverskyComboScore
(
CDPL.Shape
)
MatchConstraint.Relation
(
CDPL.Chem
)
Renderer2D
(
CDPL.Vis
)
ResidueDictionary
(
CDPL.Biomol
)
ResidueList
(
CDPL.Biomol
)
ResidueType
(
CDPL.Biomol
)
ResonanceStructureGenerator
(
CDPL.Chem
)
GaussianShapeFunctionAlignment.Result
(
CDPL.Shape
)
ReturnCode
(
CDPL.ConfGen
)
RMSDConformerSelector
(
CDPL.ConfGen
)
TorsionCategory.RuleSequence
(
CDPL.ConfGen
)
RXNReactionInputHandler
(
CDPL.Chem
)
RXNReactionOutputHandler
(
CDPL.Chem
)
RXNReactionReader
(
CDPL.Chem
)
RXNReactionWriter
(
CDPL.Chem
)
S
SArray
(
CDPL.Util
)
FeatureInteractionScoreGridCalculator.ScoreSumFunctor
(
CDPL.GRAIL
)
ScreeningDBAccessor
(
CDPL.Pharm
)
ScreeningDBCreator
(
CDPL.Pharm
)
ScreeningSettings.ScreeningMode
(
CDPL.Shape
)
ScreeningProcessor
(
CDPL.Pharm
)
ScreeningProcessor
(
CDPL.Shape
)
ScreeningSettings
(
CDPL.Shape
)
SDFBZ2MolecularGraphOutputHandler
(
CDPL.Chem
)
SDFBZ2MolecularGraphWriter
(
CDPL.Chem
)
SDFBZ2MoleculeInputHandler
(
CDPL.Chem
)
SDFBZ2MoleculeReader
(
CDPL.Chem
)
SDFGZMolecularGraphOutputHandler
(
CDPL.Chem
)
SDFGZMolecularGraphWriter
(
CDPL.Chem
)
SDFGZMoleculeInputHandler
(
CDPL.Chem
)
SDFGZMoleculeReader
(
CDPL.Chem
)
SDFMolecularGraphOutputHandler
(
CDPL.Chem
)
SDFMolecularGraphWriter
(
CDPL.Chem
)
SDFMoleculeInputHandler
(
CDPL.Chem
)
SDFMoleculeReader
(
CDPL.Chem
)
ScreeningProcessor.SearchHit
(
CDPL.Pharm
)
ShapeTanimotoScore
(
CDPL.Shape
)
ShapeTverskyScore
(
CDPL.Shape
)
SizeAdjustment
(
CDPL.Vis
)
SizeError
(
CDPL.Base
)
SizeSpecification
(
CDPL.Vis
)
SizeTypeAtomFunctor
(
CDPL.Chem
)
SizeTypeAtomMolecularGraphFunctor
(
CDPL.Chem
)
Slice
(
CDPL.Math
)
SmallestSetOfSmallestRings
(
CDPL.Chem
)
SMARTSMolecularGraphOutputHandler
(
CDPL.Chem
)
SMARTSMolecularGraphWriter
(
CDPL.Chem
)
SMARTSMoleculeInputHandler
(
CDPL.Chem
)
SMARTSMoleculeReader
(
CDPL.Chem
)
SMARTSReactionInputHandler
(
CDPL.Chem
)
SMARTSReactionOutputHandler
(
CDPL.Chem
)
SMARTSReactionReader
(
CDPL.Chem
)
SMARTSReactionWriter
(
CDPL.Chem
)
SMILESBZ2MolecularGraphOutputHandler
(
CDPL.Chem
)
SMILESBZ2MolecularGraphWriter
(
CDPL.Chem
)
SMILESBZ2MoleculeInputHandler
(
CDPL.Chem
)
SMILESBZ2MoleculeReader
(
CDPL.Chem
)
SMILESBZ2ReactionInputHandler
(
CDPL.Chem
)
SMILESBZ2ReactionOutputHandler
(
CDPL.Chem
)
SMILESBZ2ReactionReader
(
CDPL.Chem
)
SMILESBZ2ReactionWriter
(
CDPL.Chem
)
SMILESGZMolecularGraphOutputHandler
(
CDPL.Chem
)
SMILESGZMolecularGraphWriter
(
CDPL.Chem
)
SMILESGZMoleculeInputHandler
(
CDPL.Chem
)
SMILESGZMoleculeReader
(
CDPL.Chem
)
SMILESGZReactionInputHandler
(
CDPL.Chem
)
SMILESGZReactionOutputHandler
(
CDPL.Chem
)
SMILESGZReactionReader
(
CDPL.Chem
)
SMILESGZReactionWriter
(
CDPL.Chem
)
SMILESMolecularGraphOutputHandler
(
CDPL.Chem
)
SMILESMolecularGraphWriter
(
CDPL.Chem
)
SMILESMoleculeInputHandler
(
CDPL.Chem
)
SMILESMoleculeReader
(
CDPL.Chem
)
SMILESReactionInputHandler
(
CDPL.Chem
)
SMILESReactionOutputHandler
(
CDPL.Chem
)
SMILESReactionReader
(
CDPL.Chem
)
SMILESReactionWriter
(
CDPL.Chem
)
SparseDMatrix
(
CDPL.Math
)
SparseDVector
(
CDPL.Math
)
SparseFMatrix
(
CDPL.Math
)
SparseFVector
(
CDPL.Math
)
SparseLMatrix
(
CDPL.Math
)
SparseLVector
(
CDPL.Math
)
SparseULMatrix
(
CDPL.Math
)
SparseULVector
(
CDPL.Math
)
SpatialAtomAlignment
(
CDPL.Chem
)
SpatialEntity3DAlignment
(
CDPL.Chem
)
SpatialFeatureAlignment
(
CDPL.Pharm
)
SpatialFeatureMapping
(
CDPL.Pharm
)
STArray
(
CDPL.Util
)
FVectorBFGSMinimizer.Status
(
CDPL.Math
)
DVectorBFGSMinimizer.Status
(
CDPL.Math
)
Vector2DArrayBFGSMinimizer.Status
(
CDPL.Math
)
Vector2FArrayBFGSMinimizer.Status
(
CDPL.Math
)
Vector3DArrayBFGSMinimizer.Status
(
CDPL.Math
)
Vector3FArrayBFGSMinimizer.Status
(
CDPL.Math
)
DGConstraintGenerator.StereoCenterData
(
CDPL.ConfGen
)
StereoDescriptor
(
CDPL.Chem
)
StereoisomerGenerator.StereoDescriptorArray
(
CDPL.Chem
)
StereoisomerGenerator
(
CDPL.Chem
)
STPair
(
CDPL.Util
)
STPairArray
(
CDPL.Util
)
StringDataBlock
(
CDPL.Chem
)
StringDataBlockEntry
(
CDPL.Chem
)
StringIOStream
(
CDPL.Base
)
ResonanceStructureGenerator.StructureData
(
CDPL.Chem
)
StructureGenerationMode
(
CDPL.ConfGen
)
StructureGenerator
(
CDPL.ConfGen
)
StructureGeneratorSettings
(
CDPL.ConfGen
)
StructureGridView2D
(
CDPL.Vis
)
StructureView2D
(
CDPL.Vis
)
Brush.Style
(
CDPL.Vis
)
SubstructureHistogramCalculator
(
CDPL.Chem
)
SubstructureSearch
(
CDPL.Chem
)
SulfenicAcidTautomerization
(
CDPL.Chem
)
SurfaceAtomExtractor
(
CDPL.Chem
)
SVGMolecularGraphOutputHandler
(
CDPL.Vis
)
SVGMolecularGraphWriter
(
CDPL.Vis
)
SVGReactionOutputHandler
(
CDPL.Vis
)
SVGReactionWriter
(
CDPL.Vis
)
SybylAtomType
(
CDPL.Chem
)
SybylBondType
(
CDPL.Chem
)
SymmetryClass
(
CDPL.Shape
)
SymmetryClassCalculator
(
CDPL.Chem
)
T
TanimotoComboScore
(
CDPL.Shape
)
TautomerGenerator
(
CDPL.Chem
)
TautomerizationRule
(
CDPL.Chem
)
TautomerizationType
(
CDPL.Chem
)
TautomerScore
(
CDPL.Chem
)
TextBlockPrimitive2D
(
CDPL.Vis
)
TextLabelPrimitive2D
(
CDPL.Vis
)
TopologicalAtomAlignment
(
CDPL.Chem
)
TopologicalAtomDistanceFunction
(
CDPL.ForceField
)
TopologicalEntity3DAlignment
(
CDPL.Chem
)
TopologicalFeatureAlignment
(
CDPL.Pharm
)
TorsionCategory
(
CDPL.ConfGen
)
TorsionDriver
(
CDPL.ConfGen
)
TorsionDriverSettings
(
CDPL.ConfGen
)
TorsionLibrary
(
CDPL.ConfGen
)
TorsionRule
(
CDPL.ConfGen
)
TorsionRuleMatch
(
CDPL.ConfGen
)
TorsionRuleMatcher
(
CDPL.ConfGen
)
TotalOverlapTanimotoScore
(
CDPL.Shape
)
TotalOverlapTverskyScore
(
CDPL.Shape
)
TPSACalculator
(
CDPL.MolProp
)
TverskyComboScore
(
CDPL.Shape
)
MatchConstraintList.Type
(
CDPL.Chem
)
U
UFFAtomType
(
CDPL.ForceField
)
UFFAtomTypePropertyTable
(
CDPL.ForceField
)
UIArray
(
CDPL.Util
)
UInt64AtomFunctor
(
CDPL.Chem
)
UInt64AtomMolecularGraphFunctor
(
CDPL.Chem
)
UInt64BondFunctor
(
CDPL.Chem
)
ULHomogenousCoordsAdapter
(
CDPL.Math
)
ULIdentityMatrix
(
CDPL.Math
)
ULMatrix
(
CDPL.Math
)
ULMatrixColumn
(
CDPL.Math
)
ULMatrixExpression
(
CDPL.Math
)
ULMatrixRange
(
CDPL.Math
)
ULMatrixRow
(
CDPL.Math
)
ULMatrixSlice
(
CDPL.Math
)
ULMatrixTranspose
(
CDPL.Math
)
ULQuaternion
(
CDPL.Math
)
ULQuaternionExpression
(
CDPL.Math
)
ULQuaternionVectorAdapter
(
CDPL.Math
)
ULRealQuaternion
(
CDPL.Math
)
ULRotationMatrix
(
CDPL.Math
)
ULScalarMatrix
(
CDPL.Math
)
ULScalarVector
(
CDPL.Math
)
ULScalingMatrix
(
CDPL.Math
)
ULTranslationMatrix
(
CDPL.Math
)
ULUnitVector
(
CDPL.Math
)
ULVector
(
CDPL.Math
)
ULVectorExpression
(
CDPL.Math
)
ULVectorQuaternionAdapter
(
CDPL.Math
)
ULVectorRange
(
CDPL.Math
)
ULVectorSlice
(
CDPL.Math
)
ULZeroMatrix
(
CDPL.Math
)
ULZeroVector
(
CDPL.Math
)
UnitLower
(
CDPL.Math
)
UnitUpper
(
CDPL.Math
)
Upper
(
CDPL.Math
)
V
ValueError
(
CDPL.Base
)
Vector2D
(
CDPL.Math
)
Vector2DArray
(
CDPL.Math
)
Vector2DArrayAlignmentCalculator
(
CDPL.Math
)
Vector2DArrayBFGSMinimizer
(
CDPL.Math
)
Vector2DAtomFunctor
(
CDPL.Chem
)
Vector2F
(
CDPL.Math
)
Vector2FArray
(
CDPL.Math
)
Vector2FArrayAlignmentCalculator
(
CDPL.Math
)
Vector2FArrayBFGSMinimizer
(
CDPL.Math
)
Vector2L
(
CDPL.Math
)
Vector2LArray
(
CDPL.Math
)
Vector2UL
(
CDPL.Math
)
Vector2ULArray
(
CDPL.Math
)
Vector3D
(
CDPL.Math
)
Vector3DArray
(
CDPL.Math
)
Vector3DArrayAlignmentCalculator
(
CDPL.Math
)
Vector3DArrayBFGSMinimizer
(
CDPL.Math
)
Vector3DEntity3DFunctor
(
CDPL.Chem
)
Vector3F
(
CDPL.Math
)
Vector3FArray
(
CDPL.Math
)
Vector3FArrayAlignmentCalculator
(
CDPL.Math
)
Vector3FArrayBFGSMinimizer
(
CDPL.Math
)
Vector3L
(
CDPL.Math
)
Vector3LArray
(
CDPL.Math
)
Vector3UL
(
CDPL.Math
)
Vector3ULArray
(
CDPL.Math
)
Vector4D
(
CDPL.Math
)
Vector4F
(
CDPL.Math
)
Vector4L
(
CDPL.Math
)
Vector4UL
(
CDPL.Math
)
Vector7D
(
CDPL.Shape
)
Vector7D
(
CDPL.Math
)
View2D
(
CDPL.Vis
)
VoidDataIOBaseFunctor
(
CDPL.Base
)
VoidFunctor
(
CDPL.Base
)
VoidLookupKeyAnyFunctor
(
CDPL.Base
)
VoidLookupKeyFunctor
(
CDPL.Base
)
VoidMolecularGraph2AlignmentResultFunctor
(
CDPL.Shape
)
VoidMolecularGraphFunctor
(
CDPL.Chem
)
VoidMoleculeMolecularGraphFunctor
(
CDPL.Chem
)
VoidPharmacophoreFunctor
(
CDPL.GRAIL
)
DG3DCoordinatesGenerator.VolumeConstraint
(
CDPL.Util
)
DG3DCoordinatesGenerator.VolumeConstraintList
(
CDPL.Util
)
X
XBondAcceptorFeatureGenerator
(
CDPL.Pharm
)
XBondDonorFeatureGenerator
(
CDPL.Pharm
)
XBondingInteractionConstraint
(
CDPL.Pharm
)
XBondingInteractionScore
(
CDPL.Pharm
)
XLogPCalculator
(
CDPL.MolProp
)
XYZBZ2MolecularGraphOutputHandler
(
CDPL.Chem
)
XYZBZ2MolecularGraphWriter
(
CDPL.Chem
)
XYZBZ2MoleculeInputHandler
(
CDPL.Chem
)
XYZBZ2MoleculeReader
(
CDPL.Chem
)
XYZGZMolecularGraphOutputHandler
(
CDPL.Chem
)
XYZGZMolecularGraphWriter
(
CDPL.Chem
)
XYZGZMoleculeInputHandler
(
CDPL.Chem
)
XYZGZMoleculeReader
(
CDPL.Chem
)
XYZMolecularGraphOutputHandler
(
CDPL.Chem
)
XYZMolecularGraphWriter
(
CDPL.Chem
)
XYZMoleculeInputHandler
(
CDPL.Chem
)
XYZMoleculeReader
(
CDPL.Chem
)
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