Chemical Data Processing Library Python API - Version 1.4.0
Static Public Attributes | List of all members
CDPL.Biomol.ControlParameterDefault Class Reference

Provides default values for built-in control-parameters. More...

+ Inheritance diagram for CDPL.Biomol.ControlParameterDefault:

Static Public Attributes

bool STRICT_ERROR_CHECKING = False
 Default setting (= False) for the control-parameter Biomol.ControlParameter.STRICT_ERROR_CHECKING.
 
bool CHECK_LINE_LENGTH = False
 Default setting (= False) for the control-parameter Biomol.ControlParameter.CHECK_LINE_LENGTH.
 
 RESIDUE_DICTIONARY = None
 Default value (= empty shared reference) for the control-parameter Biomol.ControlParameter.RESIDUE_DICTIONARY (a nullptr selects the built-in default dictionary). More...
 
bool COMBINE_INTERFERING_RESIDUE_COORDINATES = True
 Default setting (= True) for the control-parameter Biomol.ControlParameter.COMBINE_INTERFERING_RESIDUE_COORDINATES.
 
bool APPLY_DICT_FORMAL_CHARGES = True
 Default setting (= True) for the control-parameter Biomol.ControlParameter.APPLY_DICT_FORMAL_CHARGES. More...
 
bool APPLY_DICT_ATOM_TYPES = True
 Default setting (= True) for the control-parameter Biomol.ControlParameter.APPLY_DICT_ATOM_TYPES. More...
 
bool CALC_MISSING_FORMAL_CHARGES = False
 Default setting (= False) for the control-parameter Biomol.ControlParameter.CALC_MISSING_FORMAL_CHARGES. More...
 
bool PERCEIVE_MISSING_BOND_ORDERS = True
 Default setting (= True) for the control-parameter Biomol.ControlParameter.PERCEIVE_MISSING_BOND_ORDERS. More...
 
bool PDB_APPLY_DICT_ATOM_BONDING_TO_NON_STD_RESIDUES = False
 Default setting (= False) for the control-parameter Biomol.ControlParameter.PDB_APPLY_DICT_ATOM_BONDING_TO_NON_STD_RESIDUES.
 
bool PDB_APPLY_DICT_ATOM_BONDING_TO_STD_RESIDUES = True
 Default setting (= True) for the control-parameter Biomol.ControlParameter.PDB_APPLY_DICT_ATOM_BONDING_TO_STD_RESIDUES.
 
bool PDB_APPLY_DICT_BOND_ORDERS_TO_NON_STD_RESIDUES = True
 Default setting (= True) for the control-parameter Biomol.ControlParameter.PDB_APPLY_DICT_BOND_ORDERS_TO_NON_STD_RESIDUES.
 
bool PDB_IGNORE_CONECT_RECORDS = False
 Default setting (= False) for the control-parameter Biomol.ControlParameter.PDB_IGNORE_CONECT_RECORDS.
 
bool PDB_DEDUCE_BOND_ORDERS_FROM_CONECT_RECORDS = False
 Default setting (= False) for the control-parameter Biomol.ControlParameter.PDB_DEDUCE_BOND_ORDERS_FROM_CONECT_RECORDS.
 
bool PDB_IGNORE_FORMAL_CHARGE_FIELD = False
 Default setting (= False) for the control-parameter Biomol.ControlParameter.PDB_IGNORE_FORMAL_CHARGE_FIELD.
 
bool PDB_EVALUATE_MASTER_RECORD = False
 Default setting (= False) for the control-parameter Biomol.ControlParameter.PDB_EVALUATE_MASTER_RECORD.
 
bool PDB_TRUNCATE_LINES = False
 Default setting (= False) for the control-parameter Biomol.ControlParameter.PDB_TRUNCATE_LINES.
 
bool PDB_WRITE_FORMAL_CHARGES = True
 
bool PDB_OUTPUT_CONECT_RECORDS = True
 Default setting (= True) for the control-parameter Biomol.ControlParameter.PDB_OUTPUT_CONECT_RECORDS. More...
 
bool PDB_OUTPUT_CONECT_RECORDS_FOR_ALL_BONDS = False
 Default setting (= False) for the control-parameter Biomol.ControlParameter.PDB_OUTPUT_CONECT_RECORDS_FOR_ALL_BONDS. More...
 
bool PDB_OUTPUT_CONECT_RECORDS_REFLECTING_BOND_ORDER = False
 Default setting (= False) for the control-parameter Biomol.ControlParameter.PDB_OUTPUT_CONECT_RECORDS_REFLECTING_BOND_ORDER. More...
 
int PDB_FORMAT_VERSION = 3
 Default value (= Biomol.PDBFormatVersion.V3) for the control-parameter Biomol.ControlParameter.PDB_FORMAT_VERSION.
 
bool MMCIF_APPLY_DICT_ATOM_BONDING = True
 Default setting (= True) for the control-parameter Biomol.ControlParameter.MMCIF_APPLY_DICT_ATOM_BONDING. More...
 
bool MMCIF_APPLY_DICT_BOND_ORDERS = True
 Default setting (= True) for the control-parameter Biomol.ControlParameter.MMCIF_APPLY_DICT_BOND_ORDERS. More...
 
bool MMCIF_OUTPUT_BIOPOLYMERS_AS_CHEM_COMP = False
 Default setting (= False) for the control-parameter Biomol.ControlParameter.MMCIF_OUTPUT_BIOPOLYMERS_AS_CHEM_COMP. More...
 
 MMCIF_OUTPUT_DATA_POSTPROC_FUNCTION = _HIDDEN_VALUE_
 Default value (= empty function object) for the control-parameter Biomol.ControlParameter.MMCIF_OUTPUT_DATA_POSTPROC_FUNCTION. More...
 

Detailed Description

Provides default values for built-in control-parameters.

Member Data Documentation

◆ RESIDUE_DICTIONARY

CDPL.Biomol.ControlParameterDefault.RESIDUE_DICTIONARY = None
static

Default value (= empty shared reference) for the control-parameter Biomol.ControlParameter.RESIDUE_DICTIONARY (a nullptr selects the built-in default dictionary).

Since
1.2

◆ APPLY_DICT_FORMAL_CHARGES

bool CDPL.Biomol.ControlParameterDefault.APPLY_DICT_FORMAL_CHARGES = True
static

Default setting (= True) for the control-parameter Biomol.ControlParameter.APPLY_DICT_FORMAL_CHARGES.

Since
1.2

◆ APPLY_DICT_ATOM_TYPES

bool CDPL.Biomol.ControlParameterDefault.APPLY_DICT_ATOM_TYPES = True
static

Default setting (= True) for the control-parameter Biomol.ControlParameter.APPLY_DICT_ATOM_TYPES.

Since
1.2

◆ CALC_MISSING_FORMAL_CHARGES

bool CDPL.Biomol.ControlParameterDefault.CALC_MISSING_FORMAL_CHARGES = False
static

Default setting (= False) for the control-parameter Biomol.ControlParameter.CALC_MISSING_FORMAL_CHARGES.

Since
1.2

◆ PERCEIVE_MISSING_BOND_ORDERS

bool CDPL.Biomol.ControlParameterDefault.PERCEIVE_MISSING_BOND_ORDERS = True
static

Default setting (= True) for the control-parameter Biomol.ControlParameter.PERCEIVE_MISSING_BOND_ORDERS.

Since
1.2

◆ PDB_OUTPUT_CONECT_RECORDS

bool CDPL.Biomol.ControlParameterDefault.PDB_OUTPUT_CONECT_RECORDS = True
static

Default setting (= True) for the control-parameter Biomol.ControlParameter.PDB_OUTPUT_CONECT_RECORDS.

Since
1.2

◆ PDB_OUTPUT_CONECT_RECORDS_FOR_ALL_BONDS

bool CDPL.Biomol.ControlParameterDefault.PDB_OUTPUT_CONECT_RECORDS_FOR_ALL_BONDS = False
static

Default setting (= False) for the control-parameter Biomol.ControlParameter.PDB_OUTPUT_CONECT_RECORDS_FOR_ALL_BONDS.

Since
1.2

◆ PDB_OUTPUT_CONECT_RECORDS_REFLECTING_BOND_ORDER

bool CDPL.Biomol.ControlParameterDefault.PDB_OUTPUT_CONECT_RECORDS_REFLECTING_BOND_ORDER = False
static

Default setting (= False) for the control-parameter Biomol.ControlParameter.PDB_OUTPUT_CONECT_RECORDS_REFLECTING_BOND_ORDER.

Since
1.2

◆ MMCIF_APPLY_DICT_ATOM_BONDING

bool CDPL.Biomol.ControlParameterDefault.MMCIF_APPLY_DICT_ATOM_BONDING = True
static

Default setting (= True) for the control-parameter Biomol.ControlParameter.MMCIF_APPLY_DICT_ATOM_BONDING.

Since
1.2

◆ MMCIF_APPLY_DICT_BOND_ORDERS

bool CDPL.Biomol.ControlParameterDefault.MMCIF_APPLY_DICT_BOND_ORDERS = True
static

Default setting (= True) for the control-parameter Biomol.ControlParameter.MMCIF_APPLY_DICT_BOND_ORDERS.

Since
1.2

◆ MMCIF_OUTPUT_BIOPOLYMERS_AS_CHEM_COMP

bool CDPL.Biomol.ControlParameterDefault.MMCIF_OUTPUT_BIOPOLYMERS_AS_CHEM_COMP = False
static

Default setting (= False) for the control-parameter Biomol.ControlParameter.MMCIF_OUTPUT_BIOPOLYMERS_AS_CHEM_COMP.

Since
1.2

◆ MMCIF_OUTPUT_DATA_POSTPROC_FUNCTION

CDPL.Biomol.ControlParameterDefault.MMCIF_OUTPUT_DATA_POSTPROC_FUNCTION = _HIDDEN_VALUE_
static

Default value (= empty function object) for the control-parameter Biomol.ControlParameter.MMCIF_OUTPUT_DATA_POSTPROC_FUNCTION.

Since
1.2
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