Chemical Data Processing Library C++ API - Version 1.1.1
Pharm Directory Reference
+ Directory dependency graph for Pharm:

Files

file  Pharm/APIPrefix.hpp [code]
 Definition of the preprocessor macro CDPL_PHARM_API.
 
file  AromaticFeatureGenerator.hpp [code]
 Definition of the class CDPL::Pharm::AromaticFeatureGenerator.
 
file  BasicFeature.hpp [code]
 Definition of the class CDPL::Pharm::BasicFeature.
 
file  BasicPharmacophore.hpp [code]
 Definition of the class CDPL::Pharm::BasicPharmacophore.
 
file  CationPiInteractionConstraint.hpp [code]
 Definition of the class CDPL::Pharm::CationPiInteractionConstraint.
 
file  CationPiInteractionScore.hpp [code]
 Definition of the class CDPL::Pharm::CationPiInteractionScore.
 
file  CDFBZ2FeatureContainerOutputHandler.hpp [code]
 Definition of the class CDPL::Pharm::CDFBZ2FeatureContainerOutputHandler.
 
file  CDFBZ2FeatureContainerWriter.hpp [code]
 Definition of the class CDPL::Pharm::CDFBZ2FeatureContainerWriter.
 
file  CDFBZ2PharmacophoreInputHandler.hpp [code]
 Definition of the class CDPL::Pharm::CDFBZ2PharmacophoreInputHandler.
 
file  CDFBZ2PharmacophoreReader.hpp [code]
 Definition of the class CDPL::Pharm::CDFBZ2PharmacophoreReader.
 
file  CDFFeatureContainerOutputHandler.hpp [code]
 Definition of the class CDPL::Pharm::CDFFeatureContainerOutputHandler.
 
file  CDFFeatureContainerWriter.hpp [code]
 Definition of the class CDPL::Pharm::CDFFeatureContainerWriter.
 
file  CDFGZFeatureContainerOutputHandler.hpp [code]
 Definition of the class CDPL::Pharm::CDFGZFeatureContainerOutputHandler.
 
file  CDFGZFeatureContainerWriter.hpp [code]
 Definition of the class CDPL::Pharm::CDFGZFeatureContainerWriter.
 
file  CDFGZPharmacophoreInputHandler.hpp [code]
 Definition of the class CDPL::Pharm::CDFGZPharmacophoreInputHandler.
 
file  CDFGZPharmacophoreReader.hpp [code]
 Definition of the class CDPL::Pharm::CDFGZPharmacophoreReader.
 
file  CDFPharmacophoreInputHandler.hpp [code]
 Definition of the class CDPL::Pharm::CDFPharmacophoreInputHandler.
 
file  CDFPharmacophoreReader.hpp [code]
 Definition of the class CDPL::Pharm::CDFPharmacophoreReader.
 
file  Pharm/ControlParameter.hpp [code]
 Definition of constants in namespace CDPL::Pharm::ControlParameter.
 
file  Pharm/ControlParameterDefault.hpp [code]
 Definition of constants in namespace CDPL::Pharm::ControlParameterDefault.
 
file  Pharm/ControlParameterFunctions.hpp [code]
 Declaration of convenience functions for control-parameter handling.
 
file  Pharm/DataFormat.hpp [code]
 Provides the contents of namespace CDPL::Pharm::DataFormat.
 
file  DefaultInteractionAnalyzer.hpp [code]
 Definition of the class CDPL::Pharm::DefaultInteractionAnalyzer.
 
file  DefaultPharmacophoreGenerator.hpp [code]
 Definition of the class CDPL::Pharm::DefaultPharmacophoreGenerator.
 
file  Feature.hpp [code]
 Definition of the class CDPL::Pharm::Feature.
 
file  Feature3DCoordinatesFunction.hpp [code]
 Type definition of a generic wrapper class for storing user-defined Pharm::Feature 3D-coordinates functions.
 
file  FeatureContainer.hpp [code]
 Definition of the class CDPL::Pharm::FeatureContainer.
 
file  FeatureContainerFunctions.hpp [code]
 Declaration of functions that operate on Pharm::FeatureContainer instances.
 
file  FeatureContainerProperty.hpp [code]
 Definition of constants in namespace CDPL::Pharm::FeatureContainerProperty.
 
file  FeatureContainerPropertyDefault.hpp [code]
 Definition of constants in namespace CDPL::Pharm::FeatureContainerPropertyDefault.
 
file  FeatureContainerWriter.hpp [code]
 Definition of the class CDPL::Pharm::FeatureContainerWriter.
 
file  FeatureDistanceConstraint.hpp [code]
 Definition of the class CDPL::Pharm::FeatureDistanceConstraint.
 
file  FeatureDistanceScore.hpp [code]
 Definition of the class CDPL::Pharm::FeatureDistanceScore.
 
file  Pharm/FeatureFunctions.hpp [code]
 Declaration of functions that operate on Pharm::Feature instances.
 
file  FeatureGenerator.hpp [code]
 Definition of the class CDPL::Pharm::FeatureGenerator.
 
file  FeatureGeometry.hpp [code]
 Definition of constants in namespace CDPL::Pharm::FeatureGeometry.
 
file  FeatureGeometryMatchFunctor.hpp [code]
 Definition of the class CDPL::Pharm::FeatureGeometryMatchFunctor.
 
file  FeatureInteractionScore.hpp [code]
 Definition of the class CDPL::Pharm::FeatureInteractionScore.
 
file  FeatureInteractionScoreCombiner.hpp [code]
 Definition of the class CDPL::Pharm::FeatureInteractionScoreCombiner.
 
file  FeatureMapping.hpp [code]
 Definition of the type CDPL::Pharm::FeatureMapping.
 
file  FeaturePairDistanceMatchFunctor.hpp [code]
 Definition of the class CDPL::Pharm::FeaturePairDistanceMatchFunctor.
 
file  FeaturePositionMatchFunctor.hpp [code]
 Definition of the class CDPL::Pharm::FeaturePositionMatchFunctor.
 
file  FeatureProperty.hpp [code]
 Definition of constants in namespace CDPL::Pharm::FeatureProperty.
 
file  FeaturePropertyDefault.hpp [code]
 Definition of constants in namespace CDPL::Pharm::FeaturePropertyDefault.
 
file  FeatureSet.hpp [code]
 Definition of the class CDPL::Pharm::FeatureSet.
 
file  FeatureSetFunctions.hpp [code]
 Declaration of functions that operate on Pharm::FeatureSet instances.
 
file  Pharm/FeatureType.hpp [code]
 Definition of constants in namespace CDPL::Pharm::FeatureType.
 
file  FeatureTypeHistogram.hpp [code]
 Definition of the type CDPL::Pharm::FeatureTypeHistogram.
 
file  FeatureTypeMatchFunctor.hpp [code]
 Definition of the class CDPL::Pharm::FeatureTypeMatchFunctor.
 
file  FileScreeningHitCollector.hpp [code]
 Definition of the class CDPL::Pharm::FileScreeningHitCollector.
 
file  HBondAcceptorFeatureGenerator.hpp [code]
 Definition of the class CDPL::Pharm::HBondAcceptorFeatureGenerator.
 
file  HBondDonorFeatureGenerator.hpp [code]
 Definition of the class CDPL::Pharm::HBondDonorFeatureGenerator.
 
file  HBondingInteractionConstraint.hpp [code]
 Definition of the class CDPL::Pharm::HBondingInteractionConstraint.
 
file  HBondingInteractionScore.hpp [code]
 Definition of the class CDPL::Pharm::HBondingInteractionScore.
 
file  HydrophobicAtomFeatureGenerator.hpp [code]
 Definition of the class CDPL::Pharm::HydrophobicAtomFeatureGenerator.
 
file  HydrophobicFeatureGenerator.hpp [code]
 Definition of the class CDPL::Pharm::HydrophobicFeatureGenerator.
 
file  HydrophobicInteractionConstraint.hpp [code]
 Definition of the class CDPL::Pharm::HydrophobicInteractionConstraint.
 
file  HydrophobicInteractionScore.hpp [code]
 Definition of the class CDPL::Pharm::HydrophobicInteractionScore.
 
file  InteractionAnalyzer.hpp [code]
 Definition of the class CDPL::Pharm::InteractionAnalyzer.
 
file  InteractionConstraintConnector.hpp [code]
 Definition of the class CDPL::Pharm::InteractionConstraintConnector.
 
file  InteractionPharmacophoreGenerator.hpp [code]
 Definition of the class CDPL::Pharm::InteractionPharmacophoreGenerator.
 
file  IonicInteractionConstraint.hpp [code]
 Definition of the class CDPL::Pharm::IonicInteractionConstraint.
 
file  IonicInteractionScore.hpp [code]
 Definition of the class CDPL::Pharm::IonicInteractionScore.
 
file  Pharm/MoleculeFunctions.hpp [code]
 Declaration of functions that operate on Chem::Molecule instances.
 
file  NegIonizableFeatureGenerator.hpp [code]
 Definition of the class CDPL::Pharm::NegIonizableFeatureGenerator.
 
file  OrthogonalPiPiInteractionConstraint.hpp [code]
 Definition of the class CDPL::Pharm::OrthogonalPiPiInteractionConstraint.
 
file  OrthogonalPiPiInteractionScore.hpp [code]
 Definition of the class CDPL::Pharm::OrthogonalPiPiInteractionScore.
 
file  ParallelPiPiInteractionConstraint.hpp [code]
 Definition of the class CDPL::Pharm::ParallelPiPiInteractionConstraint.
 
file  ParallelPiPiInteractionScore.hpp [code]
 Definition of the class CDPL::Pharm::ParallelPiPiInteractionScore.
 
file  PatternBasedFeatureGenerator.hpp [code]
 Definition of the class CDPL::Pharm::PatternBasedFeatureGenerator.
 
file  Pharmacophore.hpp [code]
 Definition of the class CDPL::Pharm::Pharmacophore.
 
file  PharmacophoreAlignment.hpp [code]
 Definition of the class CDPL::Pharm::PharmacophoreAlignment.
 
file  PharmacophoreFitScore.hpp [code]
 Definition of the class CDPL::Pharm::PharmacophoreFitScore.
 
file  PharmacophoreFitScreeningScore.hpp [code]
 Definition of the class CDPL::Pharm::PharmacophoreFitScreeningScore.
 
file  PharmacophoreFunctions.hpp [code]
 Declaration of functions that operate on Pharm::Pharmacophore instances.
 
file  PharmacophoreGenerator.hpp [code]
 Definition of the class CDPL::Pharm::PharmacophoreGenerator.
 
file  PharmacophoreReader.hpp [code]
 Definition of the class CDPL::Pharm::PharmacophoreReader.
 
file  PMLFeatureContainerOutputHandler.hpp [code]
 Definition of the class CDPL::Pharm::PMLFeatureContainerOutputHandler.
 
file  PMLFeatureContainerWriter.hpp [code]
 Definition of the class CDPL::Pharm::PMLFeatureContainerWriter.
 
file  PMLPharmacophoreInputHandler.hpp [code]
 Definition of the class CDPL::Pharm::PMLPharmacophoreInputHandler.
 
file  PMLPharmacophoreReader.hpp [code]
 Definition of the class CDPL::Pharm::PMLPharmacophoreReader.
 
file  PosIonizableFeatureGenerator.hpp [code]
 Definition of the class CDPL::Pharm::PosIonizableFeatureGenerator.
 
file  PSDMolecularGraphOutputHandler.hpp [code]
 Definition of the class CDPL::Pharm::PSDMolecularGraphOutputHandler.
 
file  PSDMolecularGraphWriter.hpp [code]
 Definition of the class CDPL::Pharm::PSDMolecularGraphWriter.
 
file  PSDMoleculeInputHandler.hpp [code]
 Definition of the class CDPL::Pharm::PSDMoleculeInputHandler.
 
file  PSDMoleculeReader.hpp [code]
 Definition of the class CDPL::Pharm::PSDMoleculeReader.
 
file  PSDPharmacophoreInputHandler.hpp [code]
 Definition of the class CDPL::Pharm::PSDPharmacophoreInputHandler.
 
file  PSDPharmacophoreReader.hpp [code]
 Definition of the class CDPL::Pharm::PSDPharmacophoreReader.
 
file  PSDScreeningDBAccessor.hpp [code]
 Definition of the class CDPL::Pharm::PSDScreeningDBAccessor.
 
file  PSDScreeningDBCreator.hpp [code]
 Definition of the class CDPL::Pharm::PSDScreeningDBCreator.
 
file  ScreeningDBAccessor.hpp [code]
 Definition of the class CDPL::Pharm::ScreeningDBAccessor.
 
file  ScreeningDBCreator.hpp [code]
 Definition of the class CDPL::Pharm::ScreeningDBCreator.
 
file  Pharm/ScreeningProcessor.hpp [code]
 Definition of the class CDPL::Pharm::ScreeningProcessor.
 
file  SpatialFeatureMapping.hpp [code]
 Definition of the class CDPL::Pharm::SpatialFeatureMapping.
 
file  Pharm/UtilityFunctions.hpp [code]
 Declaration of miscellaneous utility functions.
 
file  XBondAcceptorFeatureGenerator.hpp [code]
 Definition of the class CDPL::Pharm::XBondAcceptorFeatureGenerator.
 
file  XBondDonorFeatureGenerator.hpp [code]
 Definition of the class CDPL::Pharm::XBondDonorFeatureGenerator.
 
file  XBondingInteractionConstraint.hpp [code]
 Definition of the class CDPL::Pharm::XBondingInteractionConstraint.
 
file  XBondingInteractionScore.hpp [code]
 Definition of the class CDPL::Pharm::XBondingInteractionScore.