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None | __init__ (Base.IStream is) |
| Constructs a PDBMoleculeReader instance that will read the molecule data from the input stream is. More...
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None | __init__ () |
| Initializes the MoleculeReaderBase instance.
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MoleculeReaderBase | read (Molecule mol, bool overwrite=True) |
| Reads the data record at the current record index and stores the read data in mol. More...
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MoleculeReaderBase | read (int idx, Molecule mol, bool overwrite=True) |
| Reads the data record at index idx and stores the read data in mol. More...
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MoleculeReaderBase | skip () |
| Skips the data record at the current record index. More...
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bool | hasMoreData () |
| Tells if there are any data records left to read. More...
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int | getRecordIndex () |
| Returns the index of the current data record. More...
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None | setRecordIndex (int idx) |
| Sets the index of the current data record to idx. More...
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int | getNumRecords () |
| Returns the total number of available data records. More...
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None | close () |
| Performs a reader specific shutdown operation (if required). More...
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bool | __nonzero__ () |
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bool | __bool__ () |
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int | registerIOCallback (VoidDataIOBaseFunctor func) |
| Registers an I/O callback target function. More...
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None | unregisterIOCallback (int id) |
| Unregisters the I/O callback function specified by id. More...
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None | invokeIOCallbacks (float progress) |
| Invokes all registered I/O callback functions with the argument self . More...
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None | clearIOCallbacks () |
| Clears all registered I/O callback functions.
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None | setParameter (LookupKey key, Any value) |
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bool | removeParameter (LookupKey key) |
| Removes the entry for the control-parameter specified by key. More...
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Any | getParameter (LookupKey key, bool throw_=False, bool local=False) |
| Returns the value of the control-parameter specified by key. More...
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Any | getParameterOrDefault (LookupKey key, Any def_value, bool local=False) |
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bool | isParameterSet (LookupKey key, bool local=False) |
| Tells whether or not a value has been assigned to the control-parameter specified by key. More...
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None | clearParameters () |
| Erases all container entries. More...
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None | addParameters (ControlParameterContainer cntnr) |
| Adds the control-parameter value entries in the ControlParameterContainer instance cntnr. More...
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None | copyParameters (ControlParameterContainer cntnr) |
| Replaces the current set of properties by a copy of the entries in cntnr. More...
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int | getNumParameters () |
| Returns the number of container entries. More...
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int | registerParameterChangedCallback (VoidLookupKeyAnyFunctor func) |
| Registers a callback target function that gets invoked when the value of a control-parameter has changed. More...
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None | unregisterParameterChangedCallback (int id) |
| Unregisters the callback specified by id. More...
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int | registerParameterRemovedCallback (VoidLookupKeyFunctor func) |
| Registers a callback target function that gets invoked when a control-parameter entry has been removed. More...
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None | unregisterParameterRemovedCallback (int id) |
| Unregisters the callback specified by id. More...
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int | registerParentChangedCallback (VoidFunctor func) |
| Registers a callback target function that gets invoked when the parent container has been changed or was detached. More...
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None | unregisterParentChangedCallback (int id) |
| Unregisters the callback specified by id. More...
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ControlParameterContainer | getParent () |
| Returns a reference to the parent control-parameter container. More...
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None | setParent (ControlParameterContainer cntnr) |
| Sets or removes the parent control-parameter container used to resolve requests for missing entries. More...
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list | getParameterKeys () |
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list | getParameterValues () |
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list | getParameters () |
| Returns a reference to itself. More...
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int | getObjectID () |
| Returns the numeric identifier (ID) of the wrapped C++ class instance. More...
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Any | __getitem__ (LookupKey key) |
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None | __setitem__ (LookupKey key, Any value) |
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bool | __delitem__ (LookupKey self) |
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bool | __contains__ (LookupKey self, bool key) |
| Returns the result of the membership test operation self in arg1 . More...
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int | __len__ () |
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A reader for molecule data in the Brookhaven Protein Data Bank (PDB) [PDB] format.