CDPL.Pharm.SpatialFeatureAlignment Class Reference

Inheritance diagram for CDPL.Pharm.SpatialFeatureAlignment:

Public Member Functions
None	__init__ ()
	Initializes the SpatialFeatureAlignment instance.
None	__init__ (SpatialFeatureAlignment alignment)
	Initializes a copy of the SpatialFeatureAlignment instance alignment. More...
int	getObjectID ()
	Returns the numeric identifier (ID) of the wrapped C++ class instance. More...
None	setEntityMatchFunction (BoolFeature2Functor func)
BoolFeature2Functor	getEntityMatchFunction ()
None	setEntityPairMatchFunction (BoolFeature4Functor func)
BoolFeature4Functor	getEntityPairMatchFunction ()
None	setTopAlignmentConstraintFunction (Chem.BoolSTPairArrayFunctor func)
Chem.BoolSTPairArrayFunctor	getTopAlignmentConstraintFunction ()
None	setEntity3DCoordinatesFunction (Feature3DCoordinatesFunction func)
Feature3DCoordinatesFunction	getEntity3DCoordinatesFunction ()
None	setEntityWeightFunction (DoubleFeatureFunctor func)
DoubleFeatureFunctor	getEntityWeightFunction ()
None	performExhaustiveSearch (bool exhaustive)
bool	exhaustiveSearchPerformed ()
None	addEntity (Feature entity, bool first_set)
None	clearEntities (bool first_set)
int	getNumEntities (bool first_set)
object	getEntities (bool first_set)
Feature	getEntity (int idx, bool first_set)
None	setMinTopologicalMappingSize (int min_size)
int	getMinTopologicalMappingSize ()
None	reset ()
bool	nextAlignment ()
Math.Matrix4D	getTransform ()
SpatialFeatureAlignment	assign (SpatialFeatureAlignment alignment)
	Replaces the current state of self with a copy of the state of the SpatialFeatureAlignment instance alignment. More...
Util.STPairArray	getTopologicalMapping ()

Properties
	objectID = property(getObjectID)
	topMapping = property(getTopologicalMapping)
	minTopologicalMappingSize = property(getMinTopologicalMappingSize, setMinTopologicalMappingSize)
	exhaustiveSearch = property(exhaustiveSearchPerformed, performExhaustiveSearch)
	transform = property(getTransform)
	entityMatchFunction = property(getEntityMatchFunction, setEntityMatchFunction)
	entityPairMatchFunction = property(getEntityPairMatchFunction, setEntityPairMatchFunction)
	topAlignmentConstraintFunction = property(getTopAlignmentConstraintFunction, setTopAlignmentConstraintFunction)
	entityCoordsFunction = property(getEntity3DCoordinatesFunction, setEntity3DCoordinatesFunction)
	entityWeightFunction = property(getEntityWeightFunction, setEntityWeightFunction)

Constructor & Destructor Documentation

__init__()

None CDPL.Pharm.SpatialFeatureAlignment.__init__

(

SpatialFeatureAlignment

alignment

)

Initializes a copy of the SpatialFeatureAlignment instance alignment.

Parameters

alignment

The SpatialFeatureAlignment instance to copy.

Member Function Documentation

getObjectID()

int CDPL.Pharm.SpatialFeatureAlignment.getObjectID

(

)

Returns the numeric identifier (ID) of the wrapped C++ class instance.

Different Python SpatialFeatureAlignment instances may reference the same underlying C++ class instance. The commonly used Python expression a is not b thus cannot tell reliably whether the two SpatialFeatureAlignment instances a and b reference different C++ objects. The numeric identifier returned by this method allows to correctly implement such an identity test via the simple expression a.getObjectID() != b.getObjectID().

Returns

The numeric ID of the internally referenced C++ class instance.

setEntityMatchFunction()

None CDPL.Pharm.SpatialFeatureAlignment.setEntityMatchFunction

(

BoolFeature2Functor

func

)

Parameters

func

getEntityMatchFunction()

BoolFeature2Functor CDPL.Pharm.SpatialFeatureAlignment.getEntityMatchFunction

(

)

Returns

setEntityPairMatchFunction()

None CDPL.Pharm.SpatialFeatureAlignment.setEntityPairMatchFunction

(

BoolFeature4Functor

func

)

Parameters

func

getEntityPairMatchFunction()

BoolFeature4Functor CDPL.Pharm.SpatialFeatureAlignment.getEntityPairMatchFunction

(

)

Returns

setTopAlignmentConstraintFunction()

None CDPL.Pharm.SpatialFeatureAlignment.setTopAlignmentConstraintFunction

(

Chem.BoolSTPairArrayFunctor

func

)

Parameters

func

getTopAlignmentConstraintFunction()

Chem.BoolSTPairArrayFunctor CDPL.Pharm.SpatialFeatureAlignment.getTopAlignmentConstraintFunction

(

)

Returns

setEntity3DCoordinatesFunction()

None CDPL.Pharm.SpatialFeatureAlignment.setEntity3DCoordinatesFunction

(

Feature3DCoordinatesFunction

func

)

Parameters

func

getEntity3DCoordinatesFunction()

Feature3DCoordinatesFunction CDPL.Pharm.SpatialFeatureAlignment.getEntity3DCoordinatesFunction

(

)

Returns

setEntityWeightFunction()

None CDPL.Pharm.SpatialFeatureAlignment.setEntityWeightFunction

(

DoubleFeatureFunctor

func

)

Parameters

func

getEntityWeightFunction()

DoubleFeatureFunctor CDPL.Pharm.SpatialFeatureAlignment.getEntityWeightFunction

(

)

Returns

performExhaustiveSearch()

None CDPL.Pharm.SpatialFeatureAlignment.performExhaustiveSearch

(

bool

exhaustive

)

Parameters

exhaustive

exhaustiveSearchPerformed()

bool CDPL.Pharm.SpatialFeatureAlignment.exhaustiveSearchPerformed

(

)

Returns

addEntity()

None CDPL.Pharm.SpatialFeatureAlignment.addEntity	(	Feature	entity,
		bool	first_set
	)

Parameters

entity
first_set

clearEntities()

None CDPL.Pharm.SpatialFeatureAlignment.clearEntities

(

bool

first_set

)

Parameters

first_set

getNumEntities()

int CDPL.Pharm.SpatialFeatureAlignment.getNumEntities

(

bool

first_set

)

Parameters

first_set

Returns

getEntities()

object CDPL.Pharm.SpatialFeatureAlignment.getEntities

(

bool

first_set

)

Parameters

first_set

Returns

getEntity()

Feature CDPL.Pharm.SpatialFeatureAlignment.getEntity	(	int	idx,
		bool	first_set
	)

Parameters

idx
first_set

Returns

setMinTopologicalMappingSize()

None CDPL.Pharm.SpatialFeatureAlignment.setMinTopologicalMappingSize

(

int

min_size

)

Parameters

min_size

getMinTopologicalMappingSize()

int CDPL.Pharm.SpatialFeatureAlignment.getMinTopologicalMappingSize

(

)

Returns

reset()

None CDPL.Pharm.SpatialFeatureAlignment.reset

(

)

Parameters

reset

nextAlignment()

bool CDPL.Pharm.SpatialFeatureAlignment.nextAlignment

(

)

Returns

getTransform()

Math.Matrix4D CDPL.Pharm.SpatialFeatureAlignment.getTransform

(

)

Returns

assign()

SpatialFeatureAlignment CDPL.Pharm.SpatialFeatureAlignment.assign

(

SpatialFeatureAlignment

alignment

)

Replaces the current state of self with a copy of the state of the SpatialFeatureAlignment instance alignment.

Parameters

alignment

The SpatialFeatureAlignment instance to copy.

Returns

self

getTopologicalMapping()

Util.STPairArray CDPL.Pharm.SpatialFeatureAlignment.getTopologicalMapping

(

)

Returns