addProperties(const PropertyContainer &cntnr) | CDPL::Base::PropertyContainer | |
AtomIterator typedef | CDPL::ConfGen::CanonicalFragment | |
AtomMapping typedef | CDPL::ConfGen::CanonicalFragment | |
CDPL::begin() const | CDPL::Chem::AtomContainer | |
CDPL::begin() | CDPL::Chem::AtomContainer | |
CDPL::Chem::BondContainer::begin() const | CDPL::Chem::BondContainer | |
CDPL::Chem::BondContainer::begin() | CDPL::Chem::BondContainer | |
CDPL::Base::PropertyContainer::begin() const | CDPL::Base::PropertyContainer | |
BondIterator typedef | CDPL::ConfGen::CanonicalFragment | |
CanonicalFragment() | CDPL::ConfGen::CanonicalFragment | |
CanonicalFragment(const Chem::MolecularGraph &molgraph, const Chem::MolecularGraph &parent) | CDPL::ConfGen::CanonicalFragment | |
CanonicalFragment(const CanonicalFragment &frag) | CDPL::ConfGen::CanonicalFragment | |
clear() | CDPL::ConfGen::CanonicalFragment | |
clearProperties() | CDPL::Base::PropertyContainer | |
clone() const | CDPL::ConfGen::CanonicalFragment | virtual |
ConstAtomIterator typedef | CDPL::ConfGen::CanonicalFragment | |
ConstBondIterator typedef | CDPL::ConfGen::CanonicalFragment | |
ConstEntityIterator typedef | CDPL::Chem::Entity3DContainer | |
ConstPropertyIterator typedef | CDPL::Base::PropertyContainer | |
containsAtom(const Chem::Atom &atom) const | CDPL::ConfGen::CanonicalFragment | virtual |
containsBond(const Chem::Bond &bond) const | CDPL::ConfGen::CanonicalFragment | virtual |
copyProperties(const PropertyContainer &cntnr) | CDPL::Base::PropertyContainer | |
create(const Chem::MolecularGraph &molgraph, const Chem::MolecularGraph &parent, bool modify=true, bool strip_aro_subst=true) | CDPL::ConfGen::CanonicalFragment | |
CDPL::end() const | CDPL::Chem::AtomContainer | |
CDPL::end() | CDPL::Chem::AtomContainer | |
CDPL::Chem::BondContainer::end() const | CDPL::Chem::BondContainer | |
CDPL::Chem::BondContainer::end() | CDPL::Chem::BondContainer | |
CDPL::Base::PropertyContainer::end() const | CDPL::Base::PropertyContainer | |
EntityIterator typedef | CDPL::Chem::Entity3DContainer | |
getAtom(std::size_t idx) const | CDPL::ConfGen::CanonicalFragment | virtual |
getAtom(std::size_t idx) | CDPL::ConfGen::CanonicalFragment | virtual |
getAtomIndex(const Chem::Atom &atom) const | CDPL::ConfGen::CanonicalFragment | virtual |
getAtomMapping() const | CDPL::ConfGen::CanonicalFragment | |
getAtoms() const | CDPL::Chem::AtomContainer | inline |
getAtoms() | CDPL::Chem::AtomContainer | inline |
getAtomsBegin() const | CDPL::ConfGen::CanonicalFragment | |
getAtomsBegin() | CDPL::ConfGen::CanonicalFragment | |
getAtomsEnd() const | CDPL::ConfGen::CanonicalFragment | |
getAtomsEnd() | CDPL::ConfGen::CanonicalFragment | |
getBond(std::size_t idx) const | CDPL::ConfGen::CanonicalFragment | virtual |
getBond(std::size_t idx) | CDPL::ConfGen::CanonicalFragment | virtual |
getBondIndex(const Chem::Bond &bond) const | CDPL::ConfGen::CanonicalFragment | virtual |
getBonds() const | CDPL::Chem::BondContainer | inline |
getBonds() | CDPL::Chem::BondContainer | inline |
getBondsBegin() const | CDPL::ConfGen::CanonicalFragment | |
getBondsBegin() | CDPL::ConfGen::CanonicalFragment | |
getBondsEnd() const | CDPL::ConfGen::CanonicalFragment | |
getBondsEnd() | CDPL::ConfGen::CanonicalFragment | |
getEntities() const | CDPL::Chem::Entity3DContainer | inline |
getEntities() | CDPL::Chem::Entity3DContainer | inline |
getEntitiesBegin() const | CDPL::Chem::Entity3DContainer | |
getEntitiesBegin() | CDPL::Chem::Entity3DContainer | |
getEntitiesEnd() const | CDPL::Chem::Entity3DContainer | |
getEntitiesEnd() | CDPL::Chem::Entity3DContainer | |
getEntity(std::size_t idx) const | CDPL::ConfGen::CanonicalFragment | virtual |
getEntity(std::size_t idx) | CDPL::ConfGen::CanonicalFragment | virtual |
getHashCode() const | CDPL::ConfGen::CanonicalFragment | |
getNumAtoms() const | CDPL::ConfGen::CanonicalFragment | virtual |
getNumBonds() const | CDPL::ConfGen::CanonicalFragment | virtual |
getNumEntities() const | CDPL::ConfGen::CanonicalFragment | virtual |
getNumProperties() const | CDPL::Base::PropertyContainer | |
getProperties() const | CDPL::Base::PropertyContainer | inline |
getPropertiesBegin() const | CDPL::Base::PropertyContainer | |
getPropertiesEnd() const | CDPL::Base::PropertyContainer | |
getProperty(const LookupKey &key) const | CDPL::Base::PropertyContainer | |
getProperty(const LookupKey &key, bool throw_=false) const | CDPL::Base::PropertyContainer | inline |
getPropertyOrDefault(const LookupKey &key, const T &def_val) const | CDPL::Base::PropertyContainer | |
isPropertySet(const LookupKey &key) const | CDPL::Base::PropertyContainer | inline |
operator=(const CanonicalFragment &frag) | CDPL::ConfGen::CanonicalFragment | |
CDPL::Chem::MolecularGraph::operator=(const MolecularGraph &molgraph) | CDPL::Chem::MolecularGraph | protected |
CDPL::Chem::AtomContainer::operator=(const AtomContainer &cntnr) | CDPL::Chem::AtomContainer | protected |
CDPL::Chem::Entity3DContainer::operator=(const Entity3DContainer &cntnr) | CDPL::Chem::Entity3DContainer | protected |
CDPL::Chem::BondContainer::operator=(const BondContainer &cntnr) | CDPL::Chem::BondContainer | protected |
CDPL::Base::PropertyContainer::operator=(const PropertyContainer &cntnr) | CDPL::Base::PropertyContainer | protected |
orderAtoms(const Chem::AtomCompareFunction &func) | CDPL::ConfGen::CanonicalFragment | virtual |
orderBonds(const Chem::BondCompareFunction &func) | CDPL::ConfGen::CanonicalFragment | virtual |
perceiveSSSR() | CDPL::ConfGen::CanonicalFragment | |
PropertyContainer() | CDPL::Base::PropertyContainer | inlineprotected |
PropertyContainer(const PropertyContainer &cntnr) | CDPL::Base::PropertyContainer | protected |
PropertyEntry typedef | CDPL::Base::PropertyContainer | |
removeProperty(const LookupKey &key) | CDPL::Base::PropertyContainer | |
setProperty(const LookupKey &key, T &&val) | CDPL::Base::PropertyContainer | |
SharedPointer typedef | CDPL::ConfGen::CanonicalFragment | |
swap(PropertyContainer &cntnr) | CDPL::Base::PropertyContainer | |
~AtomContainer() | CDPL::Chem::AtomContainer | inlineprotectedvirtual |
~BondContainer() | CDPL::Chem::BondContainer | inlineprotectedvirtual |
~Entity3DContainer() | CDPL::Chem::Entity3DContainer | inlineprotectedvirtual |
~MolecularGraph() | CDPL::Chem::MolecularGraph | inlinevirtual |
~PropertyContainer() | CDPL::Base::PropertyContainer | protectedvirtual |