2D and 3D Pharmacophore Fingerprints ==================================== The script *gen_ph4_fp.py* generates and outputs the 2D or 3D pharmacophore fingerprint of molecules read from a specified input file. **Synopsis** :program:`python` *gen_ph4_fp.py* [-h] -i <file> -o <file> [-n <integer>] [-d <integer>] [-b <float>] **Mandatory options** -i <file> Input molecule file -o <file> Fingerprint output file **Other options** -h, --help Show help message and exit -n <integer> Fingerprint size in bits (default: 4096) -d <integer> Type of feature distances to consider: 2 -> topological distance, 3 -> 3D distance (default: 2) -b <float> Feature distance bin size (default: 1.0) **Code** .. literalinclude:: /downloads/gen_ph4_fp.py :language: python :linenos: :lines: 21- :download:`Download source file</downloads/gen_ph4_fp.py>`