C CDPL::Shape::AlignedColorTverskyScore C CDPL::Shape::AlignedShapeTverskyScore C CDPL::Shape::AlignedTotalOverlapTverskyScore C CDPL::Shape::AlignedTverskyComboScore C CDPL::Shape::AlignmentResult C CDPL::ConfGen::TorsionRule::AngleEntry C CDPL::Base::Any A safe, type checked container for arbitrary data of variable type C CDPL::Util::Array< ValueType > A dynamic array class providing amortized constant time access to arbitrary elements ► C CDPL::Util::Array< MatchConstraint > C CDPL::Chem::MatchConstraintList MatchConstraintList C CDPL::Util::Array< MMFF94AngleBendingInteraction > C CDPL::Util::Array< MMFF94BondStretchingInteraction > C CDPL::Util::Array< MMFF94ElectrostaticInteraction > C CDPL::Util::Array< MMFF94OutOfPlaneBendingInteraction > C CDPL::Util::Array< MMFF94StretchBendInteraction > C CDPL::Util::Array< MMFF94TorsionInteraction > C CDPL::Util::Array< MMFF94VanDerWaalsInteraction > C CDPL::Util::Array< StereoDescriptor > ► C CDPL::Util::Array< StringDataBlockEntry > C CDPL::Chem::StringDataBlock An array of Chem::StringDataBlockEntry objects used to store the structure or reaction data block of a STRING SD- or RD-File data record (see [CTFILE ]) ► C CDPL::Util::Array< typename ValueType::SharedPointer > ► C CDPL::Util::IndirectArray< Fragment > ► C CDPL::Chem::FragmentList A data type for the storage of Chem::Fragment objects C CDPL::Biomol::ResidueList Implements the extraction of residues in biological macromolecules C CDPL::Chem::AromaticRingSet Implements the perception of aromatic rings in a molecular graph C CDPL::Chem::AromaticSSSRSubset Implements the extraction of the aromatic rings in the SSSR of a molecular graph C CDPL::Chem::CompleteRingSet Implements the exhaustive perception of rings in a molecular graph C CDPL::Chem::ComponentSet Implements the perception of molecular graph components C CDPL::Chem::ConnectedSubstructureSet ConnectedSubstructureSet C CDPL::Chem::ExtendedSSSR Implements the perception of the Extended Smallest Set of Smallest Rings (ESSSR) of a molecular graph C CDPL::Chem::SmallestSetOfSmallestRings Implements the perception of the Smallest Set of Smallest Rings (SSSR) of a molecular graphs C CDPL::ForceField::MMFF94AromaticSSSRSubset Implements the extraction of all rings in the SSSR of a molecular graph that are aromatic according to MMFF94 conventions ► C CDPL::Util::IndirectArray< GaussianShape > C CDPL::Shape::GaussianShapeSet ► C CDPL::Util::IndirectArray< RegularGrid< T, T > > C CDPL::Grid::RegularGridSet< T, CVT > RegularGridSet ► C CDPL::Util::IndirectArray< ElectronSystem > ► C CDPL::Chem::ElectronSystemList A data type for the storage of Chem::ElectronSystem objects C CDPL::Chem::PiElectronSystemList Implements the perception of all pi electron systems present in a molecule ► C CDPL::Util::IndirectArray< MatchExpression< ObjType1, void > > ► C CDPL::Chem::MatchExpressionList< ObjType1, void > C CDPL::Chem::ANDMatchExpressionList< ObjType1, ObjType2 > ANDMatchExpressionList C CDPL::Chem::ORMatchExpressionList< ObjType1, ObjType2 > ORMatchExpressionList C CDPL::Chem::MatchExpressionList< ObjType1, ObjType2 > A container for the storage and evaluation of logical match expression lists ► C CDPL::Util::IndirectArray< ValueType, PointerType, NullPointerCheck > A dynamic array class for the storage of object pointers with an indirected query interface ► C CDPL::Chem::MatchExpressionList< ObjType, void > C CDPL::Chem::ANDMatchExpressionList< ObjType, void > ANDMatchExpressionList C CDPL::Chem::ORMatchExpressionList< ObjType, void > ORMatchExpressionList ► C CDPL::Util::Array< V > C CDPL::Math::VectorArray< V > An array for storing generic vector objects C CDPL::Chem::Atom2DCoordinatesCalculator Atom2DCoordinatesCalculator C CDPL::Chem::Atom3DCoordinatesFunctor Atom3DCoordinatesFunctor C CDPL::Chem::AtomArray3DCoordinatesFunctor AtomArray3DCoordinatesFunctor C CDPL::Chem::AtomBondMapping A data structure for the common storage of related atom to atom and bond to bond mappings C CDPL::Chem::AtomConformer3DCoordinatesFunctor AtomConformer3DCoordinatesFunctor C CDPL::GRAIL::AtomDensityGridCalculator AtomDensityGridCalculator C CDPL::Chem::AtomDictionary A global dictionary for the lookup of data associated with the atom types defined in namespace Chem::AtomType C CDPL::MolProp::AtomHydrophobicityCalculator Implements Greene's algorithm [CATA ] for the calculation of atom hydrophobicities C CDPL::Descr::AutoCorrelation2DVectorCalculator AutoCorrelation2DVectorCalculator C CDPL::Descr::AutoCorrelation3DVectorCalculator< T > AutoCorrelation3DVectorCalculator ► C CDPL::Descr::AutoCorrelation3DVectorCalculator< Chem::Atom > C CDPL::Descr::AtomAutoCorrelation3DVectorCalculator AtomAutoCorrelation3DVectorCalculator ► C CDPL::Descr::AutoCorrelation3DVectorCalculator< Pharm::Feature > C CDPL::Descr::FeatureAutoCorrelation3DVectorCalculator FeatureAutoCorrelation3DVectorCalculator C CDPL::Chem::AutomorphismGroupSearch AutomorphismGroupSearch C CDPL::Descr::BCUTDescriptorCalculator BCUTDescriptorCalculator C CDPL::Chem::BemisMurckoAnalyzer BemisMurckoAnalyzer C CDPL::Math::BFGSMinimizer< VA, VT, FVT > Fletcher's implementation of the BFGS method C CDPL::Math::BFGSMinimizer< QuaternionTransformation > C CDPL::GRAIL::BindingAffinityCalculator BindingAffinityCalculator ► C CDPL::Chem::BondContainer A common interface for data-structures that support a random access to stored Chem::Bond instances ► C CDPL::Chem::Atom Atom C CDPL::Chem::BasicAtom BasicAtom ► C CDPL::Chem::MolecularGraph MolecularGraph ► C CDPL::Chem::Fragment Fragment ► C CDPL::Biomol::HierarchyViewNode HierarchyViewNode C CDPL::Biomol::HierarchyViewChain HierarchyViewChain C CDPL::Biomol::HierarchyViewFragment HierarchyViewFragment C CDPL::Biomol::HierarchyViewModel HierarchyViewModel C CDPL::Chem::AromaticSubstructure Implements the perception of aromatic atoms and bonds in a molecular graph C CDPL::Chem::CyclicSubstructure Implements the perception of ring atoms and bonds in a molecular graph ► C CDPL::Chem::Molecule Molecule C CDPL::Chem::BasicMolecule BasicMolecule C CDPL::ConfGen::CanonicalFragment CanonicalFragment C CDPL::Chem::BondOrderCalculator BondOrderCalculator C CDPL::Chem::PatternBasedTautomerizationRule::BondOrderChange C CDPL::Chem::BondStereoFlagCalculator BondStereoFlagCalculator C CDPL::Util::BronKerboschAlgorithm Implementation of the Bron-Kerbosch clique-detection algorithm [BKA ] C CDPL::Vis::Brush Specifies the fill pattern and fill color of shapes C CDPL::Descr::BurdenMatrixGenerator BurdenMatrixGenerator C CDPL::GRAIL::BuriednessGridCalculator BuriednessGridCalculator C CDPL::GRAIL::BuriednessScore BuriednessScore C CDPL::Vis::CairoPointer< T > A smart pointer managing the lifetime of allocated Cairo data structures C CDPL::Vis::CairoPointer< cairo_t > C CDPL::Vis::CairoPointerTraits< T > C CDPL::Vis::CairoPointerTraits< cairo_pattern_t > Specialization of CairoPointerTraits for the object type cairo_pattern_t C CDPL::Vis::CairoPointerTraits< cairo_surface_t > Specialization of CairoPointerTraits for the object type cairo_surface_t C CDPL::Vis::CairoPointerTraits< cairo_t > Specialization of CairoPointerTraits for the object type cairo_t C CDPL::Chem::CanonicalNumberingCalculator CanonicalNumberingCalculator C CDPL::Biomol::MMCIFData::Category C CDPL::Pharm::CationPiInteractionConstraint CationPiInteractionConstraint C CDPL::Chem::ChEMBLStandardizer Implementation of the ChEMBL structure preprocessing pipeline C CDPL::Chem::CIPConfigurationLabeler CIPConfigurationLabeler C CDPL::Chem::CIPPriorityCalculator CIPPriorityCalculator C CDPL::Descr::CircularFingerprintGenerator CircularFingerprintGenerator C CDPL::Vis::Color Specifies a color in terms of its red, green and blue components and an alpha-channel for transparency C CDPL::Shape::ColorTanimotoScore C CDPL::Shape::ColorTverskyScore C CDPL::Chem::CommonConnectedSubstructureSearch CommonConnectedSubstructureSearch C CDPL::Math::CommonType< T1, T2 > C CDPL::Math::ComplexTraits< T > ► C CDPL::Math::ComplexTraits< std::complex< T > > C CDPL::Math::TypeTraits< std::complex< T > > C CDPL::Util::CompressionAlgoTraits< CompAlgo > C CDPL::Util::CompressionAlgoTraits< BZIP2 > C CDPL::Util::CompressionAlgoTraits< GZIP > C CDPL::ConfGen::ConformerGenerator C CDPL::ConfGen::ConformerGeneratorSettings ► C CDPL::Base::ControlParameterContainer A class providing methods for the storage and lookup of control-parameter values C CDPL::Base::ControlParameterList A data structure for the storage and lookup of control-parameter values ► C CDPL::Base::DataIOBase Provides infrastructure for the registration of I/O callback functions ► C CDPL::Base::DataReader< Chem::Molecule > ► C CDPL::Util::StreamDataReader< Chem::Molecule, MMTFMoleculeReader > C CDPL::Biomol::MMTFMoleculeReader A reader for molecule data in the Macromolecular Transmission Format (MMTF) [MMTF ] ► C CDPL::Util::StreamDataReader< Chem::Molecule, MMCIFMoleculeReader > C CDPL::Biomol::MMCIFMoleculeReader ► C CDPL::Util::StreamDataReader< Chem::Molecule, PDBMoleculeReader > C CDPL::Biomol::PDBMoleculeReader A reader for molecule data in the Brookhaven Protein Data Bank (PDB) [PDB ] format ► C CDPL::Util::StreamDataReader< Chem::Molecule, CFLMoleculeReader > C CDPL::ConfGen::CFLMoleculeReader A reader for molecule data in the native I/O format of the CDPL C CDPL::Pharm::PSDMoleculeReader A reader for molecule data in the PSD-format of the CDPL ► C CDPL::Base::DataReader< typename ReaderImpl::DataType > C CDPL::Util::CompressedDataReader< ReaderImpl, DecompStream, DataType > CompressedDataReader C CDPL::Util::FileDataReader< ReaderImpl, DataType > FileDataReader ► C CDPL::Base::DataReader< Pharmacophore > ► C CDPL::Util::StreamDataReader< Pharmacophore, PMLPharmacophoreReader > C CDPL::Pharm::PMLPharmacophoreReader A reader for pharmacophore data in the native I/O format of LigandScout ► C CDPL::Util::StreamDataReader< Pharmacophore, CDFPharmacophoreReader > C CDPL::Pharm::CDFPharmacophoreReader A reader for pharmacophore data in the native I/O format of the CDPL C CDPL::Pharm::PSDPharmacophoreReader A reader for pharmacophore data in the PSD-format of the CDPL ► C CDPL::Base::DataReader< DataType > C CDPL::Util::CompoundDataReader< DataType > CompoundDataReader C CDPL::Util::MultiFormatDataReader< DataType > MultiFormatDataReader C CDPL::Util::StreamDataReader< DataType, ReaderImpl > A helper class that implements Base::DataReader for std::istream based data readers ► C CDPL::Base::DataWriter< FeatureContainer > C CDPL::Pharm::CDFFeatureContainerWriter A writer for feature container data in the native I/O format of the CDPL C CDPL::Pharm::PMLFeatureContainerWriter A writer for feature container data in the native I/O format of LigandScout ► C CDPL::Base::DataWriter< DRegularGrid > C CDPL::Grid::CDFDRegularGridWriter A writer for spatial regular grid data in the native I/O format of the CDPL ► C CDPL::Base::DataWriter< Reaction > C CDPL::Chem::CDFReactionWriter A writer for molecular graph data in the native I/O format of the CDPL C CDPL::Chem::JMEReactionWriter A writer for reaction data in the native I/O format of the JME Molecular Editor [JME ] java applet C CDPL::Chem::RDFReactionWriter A writer for reaction data in the MDL RD-File [CTFILE ] format C CDPL::Chem::RXNReactionWriter A writer for reaction data in the MDL Rxn-File [CTFILE ] format C CDPL::Chem::SMARTSReactionWriter A writer for reaction data in the Daylight SMARTS [SMARTS ] format C CDPL::Chem::SMILESReactionWriter A writer for reaction data in the Daylight SMILES [SMILES ] format ► C CDPL::Base::DataWriter< Chem::Reaction > C CDPL::Vis::PDFReactionWriter Creates 2D depictions of chemical reactions in the Portable Document Format (PDF) [WPDF ] C CDPL::Vis::PNGReactionWriter Creates 2D depictions of chemical reactions in the Portable Network Graphics (PNG) [WPNG ] format C CDPL::Vis::PSReactionWriter Creates 2D depictions of chemical reactions in the PostScript (PS) [WPS ] format C CDPL::Vis::SVGReactionWriter Creates 2D depictions of chemical reactions in the Scalable Vector Graphics (SVG) [WSVG ] format ► C CDPL::Base::DataWriter< DataType > C CDPL::Util::MultiFormatDataWriter< DataType > MultiFormatDataWriter ► C CDPL::Base::DataWriter< DRegularGridSet > C CDPL::Grid::CDFDRegularGridSetWriter A writer for spatial regular grid set data in the native I/O format of the CDPL ► C CDPL::Base::DataWriter< typename WriterImpl::DataType > C CDPL::Util::CompressedDataWriter< WriterImpl, CompStream, DataType > CompressedDataWriter C CDPL::Util::FileDataWriter< WriterImpl, DataType > FileDataWriter ► C CDPL::Base::DataWriter< MolecularGraph > C CDPL::Chem::CDFMolecularGraphWriter A writer for molecular graph data in the native I/O format of the CDPL C CDPL::Chem::CMLMolecularGraphWriter A writer for molecular graph data in the Chemical Markup Language [CML ] format C CDPL::Chem::INCHIMolecularGraphWriter A writer for molecular graph data in the IUPAC International Chemical Identifier (InChI) [INCHI ] format C CDPL::Chem::JMEMolecularGraphWriter A writer for molecular graph data in the native I/O format of the JME Molecular Editor [JME ] java applet C CDPL::Chem::MOL2MolecularGraphWriter C CDPL::Chem::MOLMolecularGraphWriter A writer for molecular graph data in the MDL Mol-File [CTFILE ] format C CDPL::Chem::SDFMolecularGraphWriter A writer for molecular graph data in the MDL Mol-File [CTFILE ] format C CDPL::Chem::SMARTSMolecularGraphWriter A writer for molecular graph data in the Daylight SMARTS [SMARTS ] format C CDPL::Chem::SMILESMolecularGraphWriter A writer for molecular graph data in the Daylight SMILES [SMILES ] format C CDPL::Chem::XYZMolecularGraphWriter ► C CDPL::Base::DataWriter< Chem::MolecularGraph > C CDPL::Biomol::MMCIFMolecularGraphWriter C CDPL::Biomol::MMTFMolecularGraphWriter A writer for molecular graph data in the Macromolecular Transmission Format (MMTF) [MMTF ] C CDPL::Biomol::PDBMolecularGraphWriter A writer for molecular graph data in the Brookhaven Protein Data Bank (PDB) [PDB ] format C CDPL::Pharm::PSDMolecularGraphWriter A writer for molecular graph data in the PSD-format of the CDPL C CDPL::Vis::PDFMolecularGraphWriter Creates 2D structure diagrams of molecular graphs in the Portable Document Format (PDF) [WPDF ] C CDPL::Vis::PNGMolecularGraphWriter Creates 2D structure diagrams of molecular graphs in the Portable Network Graphics (PNG) [WPNG ] format C CDPL::Vis::PSMolecularGraphWriter Creates 2D structure diagrams of molecular graphs in the PostScript (PS) [WPS ] format C CDPL::Vis::SVGMolecularGraphWriter Creates 2D structure diagrams of molecular graphs in the Scalable Vector Graphics (SVG) [WSVG ] format ► C CDPL::Base::DataReader< T > An interface for reading data objects of a given type from an arbitrary data source ► C CDPL::Util::StreamDataReader< Molecule, SMILESMoleculeReader > C CDPL::Chem::SMILESMoleculeReader A reader for molecule data in the Daylight SMILES [SMILES ] format ► C CDPL::Util::StreamDataReader< Molecule, CDFMoleculeReader > C CDPL::Chem::CDFMoleculeReader A reader for molecule data in the native I/O format of the CDPL ► C CDPL::Util::StreamDataReader< Molecule, XYZMoleculeReader > C CDPL::Chem::XYZMoleculeReader ► C CDPL::Util::StreamDataReader< Molecule, SDFMoleculeReader > C CDPL::Chem::SDFMoleculeReader A Reader for molecule data in the MDL SD-File [CTFILE ] format ► C CDPL::Util::StreamDataReader< Reaction, SMILESReactionReader > C CDPL::Chem::SMILESReactionReader A reader for reaction data in the Daylight SMILES [SMILES ] format ► C CDPL::Util::StreamDataReader< Molecule, MOL2MoleculeReader > C CDPL::Chem::MOL2MoleculeReader ► C CDPL::Util::StreamDataReader< Molecule, CMLMoleculeReader > C CDPL::Chem::CMLMoleculeReader A Reader for molecule data in the Chemical Markup Language [CML ] format ► C CDPL::Util::StreamDataReader< Molecule, SMARTSMoleculeReader > C CDPL::Chem::SMARTSMoleculeReader A reader for molecule data in the Daylight SMARTS [SMARTS ] format ► C CDPL::Util::StreamDataReader< DRegularGrid, CDFDRegularGridReader > C CDPL::Grid::CDFDRegularGridReader A reader for spatial regular grid data in the native I/O format of the CDPL ► C CDPL::Util::StreamDataReader< Molecule, INCHIMoleculeReader > C CDPL::Chem::INCHIMoleculeReader A reader for molecule data in the IUPAC International Chemical Identifier (InChI) [INCHI ] format ► C CDPL::Util::StreamDataReader< Reaction, CDFReactionReader > C CDPL::Chem::CDFReactionReader A reader for reaction data in the native I/O format of the CDPL ► C CDPL::Util::StreamDataReader< DRegularGridSet, CDFDRegularGridSetReader > C CDPL::Grid::CDFDRegularGridSetReader A reader for spatial regular grid set data in the native I/O format of the CDPL ► C CDPL::Util::StreamDataReader< Reaction, RXNReactionReader > C CDPL::Chem::RXNReactionReader A reader for reaction data in the MDL Rxn-File [CTFILE ] format ► C CDPL::Util::StreamDataReader< Molecule, MOLMoleculeReader > C CDPL::Chem::MOLMoleculeReader A reader for molecule data in the MDL Mol-File [CTFILE ] format ► C CDPL::Util::StreamDataReader< Reaction, RDFReactionReader > C CDPL::Chem::RDFReactionReader A reader for reaction data in the MDL RD-File [CTFILE ] format ► C CDPL::Util::StreamDataReader< Molecule, JMEMoleculeReader > C CDPL::Chem::JMEMoleculeReader A reader for molecule data in the native I/O format of the JME Molecular Editor [JME ] java applet ► C CDPL::Util::StreamDataReader< Reaction, SMARTSReactionReader > C CDPL::Chem::SMARTSReactionReader A reader for reaction data in the Daylight SMARTS [SMARTS ] format ► C CDPL::Util::StreamDataReader< Reaction, JMEReactionReader > C CDPL::Chem::JMEReactionReader A reader for reaction data in the native I/O format of the JME Molecular Editor [JME ] java applet C CDPL::Base::DataWriter< T > An interface for writing data objects of a given type to an arbitrary data sink C CDPL::Vis::StructureGridView2D::Cell Data structure storing the contents of a grid cell ► C CDPL::Vis::View2D The abstract base of classes implementing the 2D visualization of data objects C CDPL::Vis::ReactionView2D Implements the 2D visualization of chemical reactions C CDPL::Vis::StructureGridView2D Implements the 2D visualization of multiple chemical structures arranged in a grid C CDPL::Vis::StructureView2D Implements the 2D visualization of chemical structures C CDPL::Base::DataFormat Provides meta-information about a particular data storage format C CDPL::Base::DataInputHandler< T > A factory interface providing methods for the creation of Base::DataReader instances handling a particular object type and storage format ► C CDPL::Base::DataInputHandler< Chem::Molecule > C CDPL::Pharm::PSDMoleculeInputHandler A handler for the input of molecule data in the PSD-format of the CDPL ► C CDPL::Base::DataInputHandler< Pharmacophore > C CDPL::Pharm::PSDPharmacophoreInputHandler A handler for the input of pharmacophore data in the PSD-format of the CDPL ► C CDPL::Base::DataInputHandler< typename ReaderImpl::DataType > C CDPL::Util::DefaultDataInputHandler< ReaderImpl, Format, DataType > DefaultDataInputHandler C CDPL::Base::DataIOManager< T > A singleton class that serves as a global registry for Base::DataInputHandler and Base::DataOutputHandler implementation instances C CDPL::Base::DataOutputHandler< T > A factory interface providing methods for the creation of Base::DataWriter instances handling a particular object type and storage format ► C CDPL::Base::DataOutputHandler< Chem::MolecularGraph > C CDPL::Pharm::PSDMolecularGraphOutputHandler A handler for the output of molecular graph dara in the PSD-format of the CDPL ► C CDPL::Base::DataOutputHandler< typename WriterImpl::DataType > C CDPL::Util::DefaultDataOutputHandler< WriterImpl, FORMAT, DataType > DefaultDataOutputHandler C CDPL::Descr::PathFingerprintGenerator::DefAtomDescriptorFunctor The default functor for the generation of atom descriptors C CDPL::Chem::HashCodeCalculator::DefAtomHashSeedFunctor The default functor for the generation of atom hash seeds C CDPL::Descr::CircularFingerprintGenerator::DefAtomIdentifierFunctor The functor for the generation of ECFP atom identifiers C CDPL::Util::ObjectPool< T >::DefaultConstructor C CDPL::Util::ObjectStack< T >::DefaultConstructor C CDPL::Util::ObjectPool< T >::DefaultDestructor C CDPL::Descr::PathFingerprintGenerator::DefBondDescriptorFunctor The default functor for the generation of bond descriptors C CDPL::Chem::HashCodeCalculator::DefBondHashSeedFunctor The default functor for the generation of bond hash seeds C CDPL::Descr::CircularFingerprintGenerator::DefBondIdentifierFunctor The default functor for the generation of bond identifiers C CDPL::Util::Dereferencer< ArgType, ResType > An unary functor for the dereferenciation of pointers without null pointer checking C CDPL::ConfGen::DGConstraintGenerator ► C CDPL::ConfGen::DGConstraintGeneratorSettings C CDPL::ConfGen::DGStructureGeneratorSettings ► C CDPL::Util::DGCoordinatesGeneratorBase< Dim, T, Derived > Base for classes dedicated to the generation of coordinates that fulfill user-provided point distance (and volume) constraints [ASPE ] C CDPL::Util::DGCoordinatesGenerator< 2, double > ► C CDPL::Util::DGCoordinatesGeneratorBase< 3, T, DGCoordinatesGenerator< 3, T > > C CDPL::Util::DGCoordinatesGenerator< 3, T > Specialized implementation for the generation of 3D coordinates that fulfill user-provided point distance and volume constraints [ASPE ] ► C CDPL::Util::DGCoordinatesGeneratorBase< Dim, T, DGCoordinatesGenerator< Dim, T > > C CDPL::Util::DGCoordinatesGenerator< Dim, T > Generic implementation for generation of coordinates that fulfill user-provided point distance constraints [ASPE ] C CDPL::ConfGen::DGStructureGenerator C CDPL::Math::DirectAssignmentProxy< C > C CDPL::Util::DGCoordinatesGeneratorBase< Dim, T, Derived >::DistanceConstraint C CDPL::ForceField::ElasticPotential C CDPL::Shape::FastGaussianShapeAlignment::ShapeData::Element C CDPL::Shape::GaussianShape::Element ► C CDPL::Chem::Entity3DContainer A common interface for data-structures that support a random access to stored Chem::Entity3D instances ► C CDPL::Chem::AtomContainer A common interface for data-structures that support a random access to stored Chem::Atom instances C CDPL::Chem::Atom Atom ► C CDPL::Chem::Bond Bond C CDPL::Chem::BasicBond BasicBond C CDPL::Chem::ElectronSystem Describes an electron system of a molecule in terms of involved atoms and their electron contributions C CDPL::Chem::MolecularGraph MolecularGraph ► C CDPL::Pharm::FeatureContainer FeatureContainer C CDPL::Pharm::FeatureSet FeatureSet ► C CDPL::Pharm::Pharmacophore Pharmacophore C CDPL::Pharm::BasicPharmacophore BasicPharmacophore C CDPL::Chem::Entity3DCoordinatesFunctor Entity3DCoordinatesFunctor C CDPL::Biomol::ResidueDictionary::Entry C CDPL::Chem::AtomDictionary::Entry C CDPL::ForceField::MMFF94AngleBendingParameterTable::Entry C CDPL::ForceField::MMFF94AromaticAtomTypeDefinitionTable::Entry C CDPL::ForceField::MMFF94AtomTypePropertyTable::Entry C CDPL::ForceField::MMFF94BondChargeIncrementTable::Entry C CDPL::ForceField::MMFF94BondStretchingParameterTable::Entry C CDPL::ForceField::MMFF94BondStretchingRuleParameterTable::Entry C CDPL::ForceField::MMFF94DefaultStretchBendParameterTable::Entry C CDPL::ForceField::MMFF94FormalAtomChargeDefinitionTable::Entry C CDPL::ForceField::MMFF94OutOfPlaneBendingParameterTable::Entry C CDPL::ForceField::MMFF94PartialBondChargeIncrementTable::Entry C CDPL::ForceField::MMFF94PrimaryToParameterAtomTypeMap::Entry C CDPL::ForceField::MMFF94StretchBendParameterTable::Entry C CDPL::ForceField::MMFF94SymbolicAtomTypePatternTable::Entry C CDPL::ForceField::MMFF94TorsionParameterTable::Entry C CDPL::ForceField::MMFF94VanDerWaalsParameterTable::Entry C CDPL::ForceField::UFFAtomTypePropertyTable::Entry ► C std::exception STL class ► C CDPL::Base::Exception The root of the CDPL exception hierarchy C CDPL::Base::BadCast Thrown to indicate that a cast or conversion from a given source type to a requested target type is not possible C CDPL::Base::ItemNotFound Thrown to indicate that some requested data item could not be found ► C CDPL::Base::OperationFailed Thrown to indicate that some requested operation has failed (e.g. due to unfulfilled preconditions or other errors) C CDPL::Base::CalculationFailed Thrown to indicate that some requested calculation has failed C CDPL::Base::IOError Thrown to indicate that an I/O operation has failed because of physical (e.g. broken pipe) or logical (e.g. invalid file format) errors ► C CDPL::Base::ValueError Thrown to indicate errors caused by some invalid value C CDPL::Base::NullPointerException Thrown when an operation requires or expects a valid pointer but a null pointer was provided ► C CDPL::Base::RangeError Thrown to indicate that a value is out of range C CDPL::Base::IndexError Thrown to indicate that an index is out of range C CDPL::Base::SizeError Thrown to indicate that the size of a (multidimensional) array is not correct ► C CDPL::ForceField::Error C CDPL::ForceField::ParameterizationFailed C CDPL::Chem::FragmentGenerator::ExcludePattern ► C CDPL::Math::Expression< E > ► C CDPL::Math::GridExpression< GridUnary< E, F > > C CDPL::Math::GridUnary< E, F > ► C CDPL::Math::GridExpression< RegularSpatialGrid< T, typename TypeTraits< T >::RealType, Grid< T >, CMatrix< typename TypeTraits< T >::RealType, 4, 4 > > > C CDPL::Math::RegularSpatialGrid< T, C, GD, XF > ► C CDPL::Math::GridExpression< Scalar1GridBinary< E1, E2, F > > C CDPL::Math::Scalar1GridBinary< E1, E2, F > ► C CDPL::Math::GridExpression< C > C CDPL::Math::GridContainer< C > ► C CDPL::Math::GridExpression< GridReference< G > > C CDPL::Math::GridReference< G > ► C CDPL::Math::GridExpression< Scalar2GridBinary< E1, E2, F > > C CDPL::Math::Scalar2GridBinary< E1, E2, F > ► C CDPL::Math::GridExpression< GridBinary1< E1, E2, F > > C CDPL::Math::GridBinary1< E1, E2, F > ► C CDPL::Math::MatrixExpression< MatrixUnary< E, F > > C CDPL::Math::MatrixUnary< E, F > ► C CDPL::Math::MatrixExpression< MatrixSlice< M > > C CDPL::Math::MatrixSlice< M > ► C CDPL::Math::MatrixExpression< MatrixReference< M > > C CDPL::Math::MatrixReference< M > ► C CDPL::Math::MatrixExpression< C > ► C CDPL::Math::MatrixContainer< C > C CDPL::Math::CMatrix< typename TypeTraits< T >::RealType, 4, 4 > C CDPL::Math::Matrix< double > ► C CDPL::Math::MatrixExpression< TriangularAdapter< M, Tri > > C CDPL::Math::TriangularAdapter< M, Tri > ► C CDPL::Math::MatrixExpression< MatrixTranspose< M > > C CDPL::Math::MatrixTranspose< M > ► C CDPL::Math::MatrixExpression< MatrixRange< M > > C CDPL::Math::MatrixRange< M > ► C CDPL::Math::MatrixExpression< Scalar1MatrixBinary< E1, E2, F > > C CDPL::Math::Scalar1MatrixBinary< E1, E2, F > ► C CDPL::Math::MatrixExpression< MatrixBinary2< E1, E2, F > > C CDPL::Math::MatrixBinary2< E1, E2, F > ► C CDPL::Math::MatrixExpression< VectorMatrixUnary< E, F > > C CDPL::Math::VectorMatrixUnary< E, F > ► C CDPL::Math::MatrixExpression< VectorMatrixBinary< E1, E2, F > > C CDPL::Math::VectorMatrixBinary< E1, E2, F > ► C CDPL::Math::MatrixExpression< MatrixBinary1< E1, E2, F > > C CDPL::Math::MatrixBinary1< E1, E2, F > ► C CDPL::Math::MatrixExpression< Scalar2MatrixBinary< E1, E2, F > > C CDPL::Math::Scalar2MatrixBinary< E1, E2, F > C CDPL::Math::MatrixExpression< MatrixVectorArrayAdapter > ► C CDPL::Math::QuaternionExpression< VectorQuaternionAdapter< V > > C CDPL::Math::VectorQuaternionAdapter< V > ► C CDPL::Math::QuaternionExpression< Scalar1QuaternionBinary1< E1, E2, F > > C CDPL::Math::Scalar1QuaternionBinary1< E1, E2, F > ► C CDPL::Math::QuaternionExpression< QuaternionUnary1< E, F > > C CDPL::Math::QuaternionUnary1< E, F > ► C CDPL::Math::QuaternionExpression< Scalar2QuaternionBinary1< E1, E2, F > > C CDPL::Math::Scalar2QuaternionBinary1< E1, E2, F > ► C CDPL::Math::QuaternionExpression< Scalar1QuaternionBinary2< E1, E2, F > > C CDPL::Math::Scalar1QuaternionBinary2< E1, E2, F > ► C CDPL::Math::QuaternionExpression< QuaternionUnary2< E, F > > C CDPL::Math::QuaternionUnary2< E, F > ► C CDPL::Math::QuaternionExpression< QuaternionReference< Q > > C CDPL::Math::QuaternionReference< Q > ► C CDPL::Math::QuaternionExpression< C > C CDPL::Math::QuaternionContainer< C > ► C CDPL::Math::QuaternionExpression< Scalar2QuaternionBinary2< E1, E2, F > > C CDPL::Math::Scalar2QuaternionBinary2< E1, E2, F > ► C CDPL::Math::QuaternionExpression< QuaternionBinary1< E1, E2, F > > C CDPL::Math::QuaternionBinary1< E1, E2, F > ► C CDPL::Math::QuaternionExpression< QuaternionBinary2< E1, E2, F > > C CDPL::Math::QuaternionBinary2< E1, E2, F > ► C CDPL::Math::QuaternionExpression< Scalar13QuaternionTernary< E1, E2, E3, F > > C CDPL::Math::Scalar13QuaternionTernary< E1, E2, E3, F > ► C CDPL::Math::QuaternionExpression< Scalar3QuaternionTernary< E1, E2, E3, F > > C CDPL::Math::Scalar3QuaternionTernary< E1, E2, E3, F > ► C CDPL::Math::VectorExpression< VectorSlice< V > > C CDPL::Math::VectorSlice< V > ► C CDPL::Math::VectorExpression< HomogenousCoordsAdapter< V > > C CDPL::Math::HomogenousCoordsAdapter< V > ► C CDPL::Math::VectorExpression< VectorRange< V > > C CDPL::Math::VectorRange< V > ► C CDPL::Math::VectorExpression< VectorBinary1< E1, E2, F > > C CDPL::Math::VectorBinary1< E1, E2, F > ► C CDPL::Math::VectorExpression< VectorBinary2< E1, E2, F > > C CDPL::Math::VectorBinary2< E1, E2, F > ► C CDPL::Math::VectorExpression< C > ► C CDPL::Math::VectorContainer< C > C CDPL::Math::Vector< double > ► C CDPL::Math::VectorExpression< Scalar2VectorBinary< E1, E2, F > > C CDPL::Math::Scalar2VectorBinary< E1, E2, F > ► C CDPL::Math::VectorExpression< Scalar1VectorBinary< E1, E2, F > > C CDPL::Math::Scalar1VectorBinary< E1, E2, F > ► C CDPL::Math::VectorExpression< MatrixColumn< M > > C CDPL::Math::MatrixColumn< M > ► C CDPL::Math::VectorExpression< QuaternionVectorAdapter< Q > > C CDPL::Math::QuaternionVectorAdapter< Q > ► C CDPL::Math::VectorExpression< MatrixRow< M > > C CDPL::Math::MatrixRow< M > ► C CDPL::Math::VectorExpression< VectorReference< V > > C CDPL::Math::VectorReference< V > ► C CDPL::Math::VectorExpression< QuaternionVectorBinary< E1, E2, F > > C CDPL::Math::QuaternionVectorBinary< E1, E2, F > ► C CDPL::Math::VectorExpression< Matrix2VectorBinary< E1, E2, F > > C CDPL::Math::Matrix2VectorBinary< E1, E2, F > ► C CDPL::Math::VectorExpression< Matrix1VectorBinary< E1, E2, F > > C CDPL::Math::Matrix1VectorBinary< E1, E2, F > ► C CDPL::Math::VectorExpression< VectorUnary< E, F > > C CDPL::Math::VectorUnary< E, F > ► C CDPL::Math::GridExpression< E > ► C CDPL::Math::GridContainer< Grid< T, std::vector< T > > > C CDPL::Math::Grid< T, A > ► C CDPL::Math::GridContainer< ZeroGrid< T > > C CDPL::Math::ZeroGrid< T > ► C CDPL::Math::GridContainer< ScalarGrid< T > > C CDPL::Math::ScalarGrid< T > ► C CDPL::Math::RegularSpatialGrid< T, T > C CDPL::Grid::RegularGrid< T, CVT > RegularGrid ► C CDPL::Math::MatrixExpression< E > ► C CDPL::Math::MatrixContainer< IdentityMatrix< T > > C CDPL::Math::IdentityMatrix< T > ► C CDPL::Math::MatrixContainer< ScalarMatrix< T > > C CDPL::Math::ScalarMatrix< T > ► C CDPL::Math::MatrixContainer< TranslationMatrix< T > > C CDPL::Math::TranslationMatrix< T > ► C CDPL::Math::MatrixContainer< ScalingMatrix< T > > C CDPL::Math::ScalingMatrix< T > ► C CDPL::Math::MatrixContainer< Matrix< T, std::vector< T > > > C CDPL::Math::Matrix< T, A > ► C CDPL::Math::MatrixContainer< SparseMatrix< T, std::unordered_map< std::uint64_t, T > > > C CDPL::Math::SparseMatrix< T, A > ► C CDPL::Math::MatrixContainer< BoundedMatrix< T, M, N > > C CDPL::Math::BoundedMatrix< T, M, N > ► C CDPL::Math::MatrixContainer< ZeroMatrix< T > > C CDPL::Math::ZeroMatrix< T > ► C CDPL::Math::MatrixContainer< CMatrix< T, M, N > > C CDPL::Math::CMatrix< T, M, N > ► C CDPL::Math::MatrixContainer< RotationMatrix< T > > C CDPL::Math::RotationMatrix< T > ► C CDPL::Math::MatrixContainer< InitListMatrix< T > > C CDPL::Math::InitListMatrix< T > ► C CDPL::Math::QuaternionExpression< E > ► C CDPL::Math::QuaternionContainer< Quaternion< T > > C CDPL::Math::Quaternion< T > ► C CDPL::Math::QuaternionContainer< RealQuaternion< T > > C CDPL::Math::RealQuaternion< T > ► C CDPL::Math::VectorExpression< E > ► C CDPL::Math::VectorContainer< ScalarVector< T > > C CDPL::Math::ScalarVector< T > ► C CDPL::Math::VectorContainer< ZeroVector< T > > C CDPL::Math::ZeroVector< T > ► C CDPL::Math::VectorContainer< UnitVector< T > > C CDPL::Math::UnitVector< T > ► C CDPL::Math::VectorContainer< InitListVector< T > > C CDPL::Math::InitListVector< T > ► C CDPL::Math::VectorContainer< BoundedVector< T, N > > C CDPL::Math::BoundedVector< T, N > ► C CDPL::Math::VectorContainer< SparseVector< T, std::unordered_map< std::size_t, T > > > C CDPL::Math::SparseVector< T, A > ► C CDPL::Math::VectorContainer< CVector< T, N > > C CDPL::Math::CVector< T, N > ► C CDPL::Math::VectorContainer< Vector< T, std::vector< T > > > C CDPL::Math::Vector< T, A > C CDPL::Shape::FastGaussianShapeAlignment ► C CDPL::Pharm::FeatureDistanceConstraint FeatureDistanceConstraint C CDPL::Pharm::HydrophobicInteractionConstraint HydrophobicInteractionConstraint C CDPL::Pharm::IonicInteractionConstraint IonicInteractionConstraint ► C CDPL::Pharm::FeatureGenerator FeatureGenerator ► C CDPL::Pharm::PatternBasedFeatureGenerator PatternBasedFeatureGenerator C CDPL::Pharm::AromaticFeatureGenerator AromaticFeatureGenerator C CDPL::Pharm::HBondAcceptorFeatureGenerator HBondAcceptorFeatureGenerator C CDPL::Pharm::HBondDonorFeatureGenerator HBondDonorFeatureGenerator C CDPL::Pharm::HydrophobicAtomFeatureGenerator HydrophobicAtomFeatureGenerator C CDPL::Pharm::HydrophobicFeatureGenerator HydrophobicFeatureGenerator C CDPL::Pharm::NegIonizableFeatureGenerator NegIonizableFeatureGenerator C CDPL::Pharm::PosIonizableFeatureGenerator PosIonizableFeatureGenerator C CDPL::Pharm::XBondAcceptorFeatureGenerator XBondAcceptorFeatureGenerator C CDPL::Pharm::XBondDonorFeatureGenerator XBondDonorFeatureGenerator C CDPL::Pharm::FeatureGeometryMatchFunctor FeatureGeometryMatchFunctor ► C CDPL::Pharm::FeatureInteractionScore FeatureInteractionScore C CDPL::Pharm::CationPiInteractionScore CationPiInteractionScore ► C CDPL::Pharm::FeatureDistanceScore FeatureDistanceScore C CDPL::Pharm::HydrophobicInteractionScore HydrophobicInteractionScore C CDPL::Pharm::IonicInteractionScore IonicInteractionScore C CDPL::Pharm::FeatureInteractionScoreCombiner FeatureInteractionScoreCombiner C CDPL::Pharm::HBondingInteractionScore HBondingInteractionScore C CDPL::Pharm::OrthogonalPiPiInteractionScore OrthogonalPiPiInteractionScore C CDPL::Pharm::ParallelPiPiInteractionScore ParallelPiPiInteractionScore C CDPL::Pharm::XBondingInteractionScore XBondingInteractionScore C CDPL::GRAIL::FeatureInteractionScoreGridCalculator FeatureInteractionScoreGridCalculator C CDPL::Pharm::FeaturePairDistanceMatchFunctor FeaturePairDistanceMatchFunctor C CDPL::Pharm::FeaturePositionMatchFunctor FeaturePositionMatchFunctor C CDPL::Pharm::FeatureTypeMatchFunctor FeatureTypeMatchFunctor C CDPL::Util::FileRemover C CDPL::Pharm::FileScreeningHitCollector FileScreeningHitCollector C CDPL::Vis::Font Specifies a font for drawing text ► C CDPL::Vis::FontMetrics An interface class with methods that provide information about the metrics of a font C CDPL::Vis::CairoFontMetrics Implements the FontMetrics interface for the Cairo rendering backend C CDPL::Vis::QtFontMetrics Implements the FontMetrics interface for the Qt rendering backend C CDPL::ConfGen::FragmentAssembler C CDPL::ConfGen::FragmentAssemblerSettings C CDPL::Chem::FragmentGenerator::FragmentationRule C CDPL::ConfGen::FragmentConformerGenerator C CDPL::ConfGen::FragmentConformerGeneratorSettings ► C CDPL::Chem::FragmentGenerator FragmentGenerator C CDPL::Chem::BRICSFragmentGenerator BRICSFragmentGenerator C CDPL::Chem::RECAPFragmentGenerator RECAPFragmentGenerator C CDPL::ConfGen::FragmentLibrary C CDPL::ConfGen::FragmentLibraryEntry FragmentLibraryEntry C CDPL::ConfGen::FragmentLibraryGenerator FragmentLibraryGenerator C CDPL::Chem::FragmentGenerator::FragmentLink C CDPL::ConfGen::FragmentConformerGeneratorSettings::FragmentSettings C CDPL::Shape::GaussianShapeAlignment ► C CDPL::Shape::GaussianShapeAlignmentStartGenerator C CDPL::Shape::PrincipalAxesAlignmentStartGenerator C CDPL::Shape::GaussianShapeFunction C CDPL::Shape::GaussianShapeFunctionAlignment C CDPL::Shape::GaussianShapeGenerator ► C CDPL::Shape::GaussianShapeOverlapFunction C CDPL::Shape::ExactGaussianShapeOverlapFunction C CDPL::Shape::FastGaussianShapeOverlapFunction C CDPL::GRAIL::GeneralizedBellAtomDensity GeneralizedBellAtomDensity C CDPL::ForceField::GradientVectorTraits< GV > C CDPL::ForceField::GradientVectorTraits< Math::VectorArray< V > > C CDPL::ForceField::GradientVectorTraits< std::vector< V > > C CDPL::GRAIL::GRAILDataSetGenerator GRAILDataSetGenerator C CDPL::GRAIL::GRAILDescriptorCalculator GRAILDescriptorCalculator C CDPL::GRAIL::GRAILXDescriptorCalculator GRAILXDescriptorCalculator ► C CDPL::Vis::GraphicsPrimitive2D The abstract base class of all 2D graphics primitives C CDPL::Vis::ClipPathPrimitive2D A graphics primitive representing a clipping region in 2D space C CDPL::Vis::EllipsePrimitive2D A graphics primitive representing a ellipse C CDPL::Vis::LinePrimitive2D A graphics primitive representing a single line C CDPL::Vis::LineSegmentListPrimitive2D A graphics primitive representing a list of disjoint line segments C CDPL::Vis::PathPrimitive2D A graphics primitive representing an arbitrary path in 2D space C CDPL::Vis::PointListPrimitive2D A graphics primitive representing a list of points C CDPL::Vis::PolygonPrimitive2D A graphics primitive representing a polygon C CDPL::Vis::PolylinePrimitive2D A graphics primitive representing a set of connected line segments C CDPL::Vis::TextBlockPrimitive2D A graphics primitive representing a block of styled text C CDPL::Vis::TextLabelPrimitive2D A graphics primitive representing a text label C CDPL::Chem::CompleteRingSet::Node::GreaterCmpFunc C CDPL::Math::GridBinary1Traits< E1, E2, F > ► C CDPL::Math::GridBooleanBinaryFunctor< G1, G2 > C CDPL::Math::GridEquality< G1, G2 > C CDPL::Math::GridCoordinatesMatrixTransformTraits< MatrixType > ► C CDPL::Math::GridCoordinatesMatrixTransformTraits< BoundedMatrix< T, 4, 4 > > C CDPL::Math::GridCoordinatesTransformTraits< BoundedMatrix< T, 4, 4 > > ► C CDPL::Math::GridCoordinatesMatrixTransformTraits< CMatrix< T, 4, 4 > > C CDPL::Math::GridCoordinatesTransformTraits< CMatrix< T, 4, 4 > > C CDPL::Math::GridCoordinatesTransformTraits< T > C CDPL::Math::GridScalarUnaryFunctor< M > ► C CDPL::Math::GridScalarUnaryFunctor< G > C CDPL::Math::GridElementSum< G > ► C CDPL::Math::GridTemporaryTraits< G > C CDPL::Math::GridTemporaryTraits< GridReference< G > > C CDPL::Math::GridTemporaryTraits< const GridReference< G > > C CDPL::Math::GridUnaryTraits< E, F > C CDPL::Chem::HashCodeCalculator HashCodeCalculator C CDPL::Base::LookupKey::HashFunc A functor class implementing the generation of hash codes for LookupKey instances C CDPL::MolProp::HBondAcceptorAtomTyper C CDPL::MolProp::HBondDonorAtomTyper C CDPL::Pharm::HBondingInteractionConstraint HBondingInteractionConstraint C CDPL::Biomol::HierarchyView A data structure allowing a hierarchical view on biological macromolecules C CDPL::Chem::Hydrogen3DCoordinatesCalculator Hydrogen3DCoordinatesCalculator ► C CDPL::Vis::ImageWriter C CDPL::Vis::PDFMolecularGraphWriter Creates 2D structure diagrams of molecular graphs in the Portable Document Format (PDF) [WPDF ] C CDPL::Vis::PDFReactionWriter Creates 2D depictions of chemical reactions in the Portable Document Format (PDF) [WPDF ] C CDPL::Vis::PNGMolecularGraphWriter Creates 2D structure diagrams of molecular graphs in the Portable Network Graphics (PNG) [WPNG ] format C CDPL::Vis::PNGReactionWriter Creates 2D depictions of chemical reactions in the Portable Network Graphics (PNG) [WPNG ] format C CDPL::Vis::PSMolecularGraphWriter Creates 2D structure diagrams of molecular graphs in the PostScript (PS) [WPS ] format C CDPL::Vis::PSReactionWriter Creates 2D depictions of chemical reactions in the PostScript (PS) [WPS ] format C CDPL::Vis::SVGMolecularGraphWriter Creates 2D structure diagrams of molecular graphs in the Scalable Vector Graphics (SVG) [WSVG ] format C CDPL::Vis::SVGReactionWriter Creates 2D depictions of chemical reactions in the Scalable Vector Graphics (SVG) [WSVG ] format C std::integral_constant< bool, !(std::is_nothrow_move_constructible< T >::value &&sizeof(T)<=sizeof(Storage::stack) &&std::alignment_of< T >::value<=std::alignment_of< Storage::StackStorageT >::value)> ► C CDPL::Pharm::InteractionAnalyzer InteractionAnalyzer C CDPL::Pharm::DefaultInteractionAnalyzer DefaultInteractionAnalyzer C CDPL::Pharm::InteractionConstraintConnector InteractionConstraintConnector C CDPL::Pharm::InteractionPharmacophoreGenerator InteractionPharmacophoreGenerator ► C std::ios_base STL class ► C std::basic_ios< Char > STL class ► C std::basic_istream< Char > STL class ► C CDPL::Util::CompressionStreamBase< CompAlgo, std::basic_istream< char, std::char_traits< char > > > C CDPL::Util::DecompressionIStream< CompAlgo, CharT, TraitsT > ► C std::basic_iostream< Char > STL class ► C CDPL::Util::CompressionStreamBase< CompAlgo, std::basic_iostream< char, std::char_traits< char > > > C CDPL::Util::CompressedIOStream< CompAlgo, CharT, TraitsT > ► C std::basic_ostream< Char > STL class ► C CDPL::Util::CompressionStreamBase< CompAlgo, std::basic_ostream< char, std::char_traits< char > > > C CDPL::Util::CompressionOStream< CompAlgo, CharT, TraitsT > C std::basic_iostream< Char > STL class ► C std::is_arithmetic C CDPL::Math::IsScalar< T > C CDPL::Math::IsScalar< std::complex< T > > C CDPL::Biomol::MMCIFData::Item ► C boost::iterator_facade C CDPL::Util::IndexedElementIterator< ValueType, AccessFunc, IndexType > A STL compatible random access iterator for container elements accessible by index C CDPL::Math::KabschAlgorithm< T > Implementation of the Kabsch algorithm [KABA ] C CDPL::Math::KabschAlgorithm< double > C CDPL::Math::KabschAlgorithm< typename V::ValueType > C CDPL::Math::KabschAlgorithm< ValueType > C CDPL::Chem::KekuleStructureCalculator KekuleStructureCalculator C CDPL::Chem::CanonicalNumberingCalculator::AtomNode::LessCmpFunc C CDPL::Chem::CanonicalNumberingCalculator::Edge::LessCmpFunc C CDPL::Chem::CIPPriorityCalculator::AtomNode::LessCmpFunc C CDPL::Chem::SmallestSetOfSmallestRings::PathMessage::LessCmpFunc ► C CDPL::Vis::Line2D Specifies a line segment in 2D space C CDPL::Vis::LinePrimitive2D A graphics primitive representing a single line C CDPL::MolProp::LogSCalculator LogSCalculator C CDPL::Base::LookupKey An unique lookup key for control-parameter and property values C CDPL::Math::Lower C CDPL::Descr::MACCSFingerprintGenerator Generation of 166 bit MACCS key fingerprints C CDPL::Util::Map< Key, Value, AllowDefValues, KeyCompFunc > A unique sorted associative container that maps keys to values ► C CDPL::Util::Map< std::size_t, Color > C CDPL::Vis::ColorTable A container for the storage and lookup of Vis::Color objects that are associated with a numeric identifier C CDPL::Util::Map< std::size_t, double > ► C CDPL::Util::Map< unsigned int, double, true > C CDPL::MolProp::MassComposition A data type for the storage of mass percent compositions of chemical compounds ► C CDPL::Util::Map< unsigned int, std::size_t, true > C CDPL::MolProp::ElementHistogram A data type for the storage of element histograms of chemical compounds C CDPL::Pharm::FeatureTypeHistogram A data type for the storage of feature type histograms of pharmacophores C CDPL::Util::MapDefaultValue< ValueType, Allow > C CDPL::Util::MapDefaultValue< ValueType, false > C CDPL::Chem::MatchConstraint MatchConstraint C CDPL::Chem::MatchExpression< ObjType1, ObjType2 > A generic boolean expression interface for the implementation of query/target object equivalence tests in molecular graph matching algorithms ► C CDPL::Chem::MatchExpression< Atom, MolecularGraph > C CDPL::Chem::AtomConfigurationMatchExpression AtomConfigurationMatchExpression C CDPL::Chem::AtomEnvironmentMatchExpression AtomEnvironmentMatchExpression C CDPL::Chem::AtomSSSRRingSizeMatchExpression< MatchFunc > AtomSSSRRingSizeMatchExpression C CDPL::Chem::AtomTypeMatchExpression AtomTypeMatchExpression ► C CDPL::Chem::MatchExpression< Bond, MolecularGraph > C CDPL::Chem::BondConfigurationMatchExpression BondConfigurationMatchExpression C CDPL::Chem::BondDirectionMatchExpression BondDirectionMatchExpression C CDPL::Chem::BondReactionCenterStatusMatchExpression BondReactionCenterStatusMatchExpression C CDPL::Chem::BondSubstituentDirectionMatchExpression BondSubstituentDirectionMatchExpression ► C CDPL::Chem::MatchExpression< MolecularGraph > C CDPL::Chem::MolecularGraphComponentGroupingMatchExpression MolecularGraphComponentGroupingMatchExpression ► C CDPL::Chem::MatchExpression< ObjType, void > A generic boolean expression interface for the implementation of query/target object equivalence tests in molecular graph matching algorithms C CDPL::Chem::MatchExpressionList< ObjType, void > C CDPL::Chem::NOTMatchExpression< ObjType, void > NOTMatchExpression C CDPL::Chem::PropertyMatchExpression< ValueType, MatchFunc, ObjType, void > PropertyMatchExpression ► C CDPL::Chem::MatchExpression< ObjType1, void > C CDPL::Chem::MatchExpressionList< ObjType1, void > C CDPL::Chem::MatchExpressionList< ObjType1, ObjType2 > A container for the storage and evaluation of logical match expression lists C CDPL::Chem::NOTMatchExpression< ObjType1, ObjType2 > NOTMatchExpression C CDPL::Chem::PropertyMatchExpression< ValueType, MatchFunc, ObjType1, ObjType2 > PropertyMatchExpression ► C CDPL::Chem::MatchExpression< Reaction > C CDPL::Chem::ReactionAtomMappingMatchExpression ReactionAtomMappingMatchExpression C CDPL::Chem::ReactionComponentGroupingMatchExpression ReactionComponentGroupingMatchExpression C CDPL::Math::Matrix1VectorBinaryTraits< E1, E2, F > C CDPL::Math::Matrix2VectorBinaryTraits< E1, E2, F > C CDPL::Math::MatrixBinary1Traits< E1, E2, F > C CDPL::Math::MatrixBinary2Traits< E1, E2, F > ► C CDPL::Math::MatrixBinaryFunctor< M1, M2 > C CDPL::Math::MatrixProduct< M1, M2 > ► C CDPL::Math::MatrixBooleanBinaryFunctor< M1, M2 > C CDPL::Math::MatrixEquality< M1, M2 > ► C CDPL::Math::MatrixScalarRealUnaryFunctor< M > C CDPL::Math::MatrixNorm1< M > C CDPL::Math::MatrixNormFrobenius< M > C CDPL::Math::MatrixNormInfinity< M > ► C CDPL::Math::MatrixScalarUnaryFunctor< M > C CDPL::Math::MatrixElementSum< M > C CDPL::Math::MatrixTrace< M > ► C CDPL::Math::MatrixTemporaryTraits< M > C CDPL::Math::MatrixTemporaryTraits< MatrixColumn< M > > C CDPL::Math::MatrixTemporaryTraits< MatrixRange< M > > C CDPL::Math::MatrixTemporaryTraits< MatrixReference< M > > C CDPL::Math::MatrixTemporaryTraits< MatrixRow< M > > C CDPL::Math::MatrixTemporaryTraits< MatrixSlice< M > > C CDPL::Math::MatrixTemporaryTraits< MatrixTranspose< M > > C CDPL::Math::MatrixTemporaryTraits< TriangularAdapter< M, Tri > > C CDPL::Math::MatrixTemporaryTraits< const MatrixColumn< M > > C CDPL::Math::MatrixTemporaryTraits< const MatrixRange< M > > C CDPL::Math::MatrixTemporaryTraits< const MatrixReference< M > > C CDPL::Math::MatrixTemporaryTraits< const MatrixRow< M > > C CDPL::Math::MatrixTemporaryTraits< const MatrixSlice< M > > C CDPL::Math::MatrixTemporaryTraits< const MatrixTranspose< M > > C CDPL::Math::MatrixTemporaryTraits< const TriangularAdapter< M, Tri > > C CDPL::Math::MatrixUnaryTraits< E, F > ► C CDPL::Math::MatrixVectorBinaryFunctor< M, V > C CDPL::Math::MatrixVectorProduct< M, V > C CDPL::Math::VectorMatrixProduct< V, M > C CDPL::Chem::MaxCommonAtomSubstructureSearch MaxCommonAtomSubstructureSearch C CDPL::Chem::MaxCommonBondSubstructureSearch MaxCommonBondSubstructureSearch C CDPL::GRAIL::FeatureInteractionScoreGridCalculator::MaxScoreFunctor C CDPL::MolProp::MHMOPiChargeCalculator MHMOPiChargeCalculator C CDPL::Math::MinimizerVariableArrayTraits< A > C CDPL::Math::MinimizerVariableArrayTraits< std::vector< V > > C CDPL::Math::MinimizerVariableArrayTraits< VA > C CDPL::Math::MinimizerVariableArrayTraits< VectorArray< V > > C CDPL::Math::MLRModel< T > Performs Multiple Linear Regression [WLIREG ] on a set of data points C CDPL::Biomol::MMCIFData A data structure for the storage of imported MMCIF data (see [MMCIF ]) C CDPL::ForceField::MMFF94AngleBendingInteraction C CDPL::ForceField::MMFF94AngleBendingInteractionParameterizer C CDPL::ForceField::MMFF94AngleBendingParameterTable C CDPL::ForceField::MMFF94AromaticAtomTypeDefinitionTable C CDPL::ForceField::MMFF94AtomTypePropertyTable C CDPL::ForceField::MMFF94AtomTyper C CDPL::ForceField::MMFF94BondChargeIncrementTable C CDPL::ForceField::MMFF94BondStretchingInteraction C CDPL::ForceField::MMFF94BondStretchingInteractionParameterizer C CDPL::ForceField::MMFF94BondStretchingParameterTable C CDPL::ForceField::MMFF94BondStretchingRuleParameterTable C CDPL::ForceField::MMFF94BondTyper C CDPL::ForceField::MMFF94ChargeCalculator C CDPL::ForceField::MMFF94DefaultStretchBendParameterTable C CDPL::ForceField::MMFF94ElectrostaticInteraction C CDPL::ForceField::MMFF94ElectrostaticInteractionParameterizer C CDPL::ForceField::MMFF94EnergyCalculator< ValueType > C CDPL::ForceField::MMFF94FormalAtomChargeDefinitionTable C CDPL::ForceField::MMFF94GradientCalculator< ValueType > C CDPL::ForceField::MMFF94HeavyToHydrogenAtomTypeMap C CDPL::ForceField::MMFF94InteractionData C CDPL::ForceField::MMFF94InteractionParameterizer C CDPL::ForceField::MMFF94OutOfPlaneBendingInteraction C CDPL::ForceField::MMFF94OutOfPlaneBendingInteractionParameterizer C CDPL::ForceField::MMFF94OutOfPlaneBendingParameterTable C CDPL::ForceField::MMFF94PartialBondChargeIncrementTable C CDPL::ForceField::MMFF94PrimaryToParameterAtomTypeMap C CDPL::ForceField::MMFF94StretchBendInteraction C CDPL::ForceField::MMFF94StretchBendInteractionParameterizer C CDPL::ForceField::MMFF94StretchBendParameterTable C CDPL::ForceField::MMFF94SymbolicAtomTypePatternTable C CDPL::ForceField::MMFF94SymbolicToNumericAtomTypeMap C CDPL::ForceField::MMFF94TorsionInteraction C CDPL::ForceField::MMFF94TorsionInteractionParameterizer C CDPL::ForceField::MMFF94TorsionParameterTable C CDPL::ForceField::MMFF94VanDerWaalsInteraction C CDPL::ForceField::MMFF94VanDerWaalsInteractionParameterizer C CDPL::ForceField::MMFF94VanDerWaalsParameterTable C CDPL::Descr::MolecularComplexityCalculator MolecularComplexityCalculator C CDPL::Descr::MoleculeAutoCorr2DDescriptorCalculator MoleculeAutoCorr2DDescriptorCalculator C CDPL::Descr::MoleculeAutoCorr3DDescriptorCalculator MoleculeAutoCorr3DDescriptorCalculator C CDPL::Descr::MoleculeRDFDescriptorCalculator MoleculeRDFDescriptorCalculator C CDPL::Chem::MorganNumberingCalculator MorganNumberingCalculator ► C CDPL::Chem::MultiConfMoleculeInputProcessor MultiConfMoleculeInputProcessor C CDPL::Chem::DefaultMultiConfMoleculeInputProcessor MultiConfMoleculeInputProcessor C CDPL::Util::MultiMap< Key, Value, AllowDefValues, KeyCompFunc > A multiple sorted associative container that maps keys to values ► C CDPL::Util::MultiMap< const Atom *, const Atom *, true > C CDPL::Chem::AtomMapping A data type for the storage and lookup of arbitrary atom to atom mappings ► C CDPL::Util::MultiMap< const Bond *, const Bond *, true > C CDPL::Chem::BondMapping A data type for the storage and lookup of arbitrary bond to bond mappings ► C CDPL::Util::MultiMap< const Entity3D *, const Entity3D *, true > C CDPL::Chem::Entity3DMapping A data type for the storage and lookup of arbitrary entity to entity mappings ► C CDPL::Util::MultiMap< const Feature *, const Feature *, true > ► C CDPL::Pharm::FeatureMapping A data type for the storage and lookup of arbitrary feature to feature mappings C CDPL::Pharm::SpatialFeatureMapping SpatialFeatureMapping C CDPL::Util::MultiMapDefaultValue< ValueType, Allow > C CDPL::Util::MultiMapDefaultValue< ValueType, false > C CDPL::Chem::MultiSubstructureSearch MultiSubstructureSearch C CDPL::Chem::Atom2DCoordinatesCalculator::LGNode::NodeLayoutInfo ► C CDPL::Descr::NPointPharmacophoreFingerprintGenerator NPointPharmacophoreFingerprintGenerator C CDPL::Descr::NPoint2DPharmacophoreFingerprintGenerator NPoint2DPharmacophoreFingerprintGenerator C CDPL::Descr::NPoint3DPharmacophoreFingerprintGenerator NPoint3DPharmacophoreFingerprintGenerator C CDPL::Util::NullCheckDereferencer< ArgType, ResType > An unary functor for the dereferenciation of pointers with null pointer checking C CDPL::Util::ObjectPool< T > A data structure that caches instances of type T up to a user specified amount C CDPL::Util::ObjectPool< BasicAtom > C CDPL::Util::ObjectPool< BasicBond > C CDPL::Util::ObjectPool< BasicFeature > C CDPL::Util::ObjectPool< BasicMolecule > C CDPL::Util::ObjectPool< Cell > C CDPL::Util::ObjectPool< Edge > C CDPL::Util::ObjectPool< Math::Vector3DArray > C CDPL::Util::ObjectPool< PathMessage > C CDPL::Util::ObjectPool< StructureData > C CDPL::Util::ObjectPool< SubstructDescriptor > C CDPL::Util::ObjectStack< T > ObjectStack C CDPL::Util::ObjectStack< AGEdge > C CDPL::Util::ObjectStack< AGNode > C CDPL::Util::ObjectStack< AtomBondMapping > C CDPL::Util::ObjectStack< AtomNode > C CDPL::Util::ObjectStack< ClipPathPrimitive2D > C CDPL::Util::ObjectStack< Edge > C CDPL::Util::ObjectStack< GaussianShapeFunction > C CDPL::Util::ObjectStack< IndexArray > C CDPL::Util::ObjectStack< LGEdge > C CDPL::Util::ObjectStack< LinePrimitive2D > C CDPL::Util::ObjectStack< LineSegmentListPrimitive2D > C CDPL::Util::ObjectStack< PathPrimitive2D > C CDPL::Util::ObjectStack< PointListPrimitive2D > C CDPL::Util::ObjectStack< PolygonPrimitive2D > C CDPL::Util::ObjectStack< PolylinePrimitive2D > C CDPL::Util::ObjectStack< RingInfo > C CDPL::Util::ObjectStack< RingSysNode > C CDPL::Util::ObjectStack< State > C CDPL::Util::ObjectStack< StructureView2D > C CDPL::Util::ObjectStack< TextLabelPrimitive2D > C CDPL::Util::ObjectStack< Util::BitSet > C CDPL::Util::ObjectStack< Util::STPairArray > C CDPL::Pharm::OrthogonalPiPiInteractionConstraint OrthogonalPiPiInteractionConstraint C CDPL::Pharm::ParallelPiPiInteractionConstraint ParallelPiPiInteractionConstraint ► C CDPL::Vis::Path2D Provides a container for painting operations, enabling arbitrary graphical shapes to be constructed and reused C CDPL::Vis::ClipPathPrimitive2D A graphics primitive representing a clipping region in 2D space C CDPL::Vis::PathPrimitive2D A graphics primitive representing an arbitrary path in 2D space C CDPL::Vis::Path2DConverter Provides an interface for classes that implement the conversion of Vis::Path2D objects into rendering backend specific path descriptions or drawing operations C CDPL::Descr::PathFingerprintGenerator PathFingerprintGenerator C CDPL::Chem::PatternAtomTyper::Pattern C CDPL::Chem::SubstructureHistogramCalculator::Pattern C CDPL::Chem::PatternAtomTyper PatternAtomTyper C CDPL::Biomol::PDBData A data structure for the storage of imported PDB data records (see [CTFILE ]) C CDPL::Vis::Pen Specifies how to draw lines and outlines of shapes C CDPL::MolProp::PEOESigmaChargeCalculator PEOESigmaChargeCalculator C CDPL::Descr::PharmacophoreAutoCorr3DDescriptorCalculator PharmacophoreAutoCorr3DDescriptorCalculator ► C CDPL::Pharm::PharmacophoreFitScore PharmacophoreFitScore C CDPL::Pharm::PharmacophoreFitScreeningScore PharmacophoreFitScreeningScore ► C CDPL::Pharm::PharmacophoreGenerator PharmacophoreGenerator C CDPL::Pharm::DefaultPharmacophoreGenerator DefaultPharmacophoreGenerator C CDPL::Descr::PharmacophoreRDFDescriptorCalculator PharmacophoreRDFDescriptorCalculator C CDPL::Chem::CIPPriorityCalculator::AtomNode::PriorityGreaterCmpFunc C CDPL::Chem::CIPPriorityCalculator::AtomNode::PriorityLessCmpFunc ► C CDPL::Base::PropertyContainer A class providing methods for the storage and lookup of object properties C CDPL::Chem::Bond Bond ► C CDPL::Chem::Entity3D Entity3D C CDPL::Chem::Atom Atom ► C CDPL::Pharm::Feature Feature C CDPL::Pharm::BasicFeature BasicFeature C CDPL::Chem::MolecularGraph MolecularGraph ► C CDPL::Chem::Reaction Reaction C CDPL::Chem::BasicReaction BasicReaction ► C CDPL::Grid::AttributedGrid AttributedGrid ► C CDPL::Grid::SpatialGrid< T, T > C CDPL::Grid::RegularGrid< T, CVT > RegularGrid C CDPL::Grid::SpatialGrid< T, CVT > SpatialGrid C CDPL::Pharm::FeatureContainer FeatureContainer C CDPL::Shape::GaussianShape A data type for the descripton of arbitrary shapes composed of spheres approximated by gaussian functions C CDPL::Util::PropertyValue< T > An unary functor that retrieves the value of a given property from the Base::PropertyContainer instance provided as argument C CDPL::Util::PropertyValueProduct< ResType, PropertyValueType > A binary functor that calculates the product of two property values retrieved from a pair of Base::PropertyContainer instances passed as argument C CDPL::Chem::ProtonationStateStandardizer Sets the protation state of molecules according to desired objectives C CDPL::Descr::PubChemFingerprintGenerator Generation of 881 bit PubChem fingerprints C CDPL::Vis::QtObjectFactory Provides methods for the creation of QFont, QColor, QPen and QBrush objects from Font , Color , Pen and Brush instances C CDPL::Math::QuaternionBinary1Traits< E1, E2, F > C CDPL::Math::QuaternionBinary2Traits< E1, E2, F > ► C CDPL::Math::QuaternionBinaryFunctor< Q1, Q2 > C CDPL::Math::QuaternionProduct< Q1, Q2 > ► C CDPL::Math::QuaternionBooleanBinaryFunctor< Q1, Q2 > C CDPL::Math::QuaternionEquality< Q1, Q2 > ► C CDPL::Math::QuaternionScalarRealUnaryFunctor< Q > C CDPL::Math::QuaternionNorm< Q > C CDPL::Math::QuaternionNorm2< Q > ► C CDPL::Math::QuaternionScalarUnaryFunctor< Q > C CDPL::Math::QuaternionElementSum< Q > ► C CDPL::Math::QuaternionTemporaryTraits< Q > C CDPL::Math::QuaternionTemporaryTraits< QuaternionReference< Q > > C CDPL::Math::QuaternionTemporaryTraits< const QuaternionReference< Q > > C CDPL::Math::QuaternionTemporaryTraits< const VectorQuaternionAdapter< V > > C CDPL::Math::QuaternionTemporaryTraits< VectorQuaternionAdapter< V > > C CDPL::Math::QuaternionUnary1Traits< E, F > C CDPL::Math::QuaternionUnary2Traits< E, F > ► C CDPL::Math::QuaternionUnaryFunctor< Q > C CDPL::Math::QuaternionConjugate< Q > C CDPL::Math::QuaternionUnreal< Q > ► C CDPL::Math::QuaternionVectorBinaryFunctor< Q, V > C CDPL::Math::QuaternionVectorRotation< Q, V > C CDPL::Math::QuaternionVectorBinaryTraits< E1, E2, F > C CDPL::Math::Range< S > C CDPL::Math::Range< SizeType > C CDPL::Descr::RDFCodeCalculator< T > RDFCodeCalculator ► C CDPL::Descr::RDFCodeCalculator< Chem::Atom > C CDPL::Descr::AtomRDFCodeCalculator AtomRDFCodeCalculator ► C CDPL::Descr::RDFCodeCalculator< Pharm::Feature > C CDPL::Descr::FeatureRDFCodeCalculator FeatureRDFCodeCalculator C CDPL::Chem::ReactionSubstructureSearch ReactionSubstructureSearch C CDPL::Chem::Reactor Reactor C CDPL::Vis::Rectangle2D Specifies an axis aligned rectangular area in 2D space C CDPL::Shape::ReferenceColorTverskyScore C CDPL::Shape::ReferenceShapeTverskyScore C CDPL::Shape::ReferenceTotalOverlapTverskyScore C CDPL::Shape::ReferenceTverskyComboScore ► C CDPL::Vis::Renderer2D An interface that provides methods for low level 2D drawing operations C CDPL::Vis::CairoRenderer2D Implements the Renderer2D interface on top of the Cairo 2D Graphics Library C CDPL::Vis::QtRenderer2D Implements the Renderer2D interface on top of the Qt Toolkit C CDPL::Biomol::ResidueDictionary A global dictionary for the lookup of meta-data associated with the residues in biological macromolecules C CDPL::Chem::ResonanceStructureGenerator ResonanceStructureGenerator C CDPL::Shape::GaussianShapeFunctionAlignment::Result C CDPL::ConfGen::RMSDConformerSelector ► C CDPL::Math::Scalar13QuaternionTernaryFunctor< T1, Q, T2 > C CDPL::Math::ScalarQuaternionDivision< T1, Q, T2 > C CDPL::Math::Scalar13QuaternionTernaryTraits< E1, E2, E3, F > C CDPL::Math::Scalar1GridBinaryTraits< E1, E2, F > C CDPL::Math::Scalar1MatrixBinaryTraits< E1, E2, F > C CDPL::Math::Scalar1QuaternionBinary1Traits< E1, E2, F > C CDPL::Math::Scalar1QuaternionBinary2Traits< E1, E2, F > ► C CDPL::Math::Scalar1QuaternionBinaryFunctor< T, Q > C CDPL::Math::Scalar1QuaternionAddition< T, Q > C CDPL::Math::Scalar1QuaternionSubtraction< T, Q > C CDPL::Math::Scalar1VectorBinaryTraits< E1, E2, F > C CDPL::Math::Scalar2GridBinaryTraits< E1, E2, F > C CDPL::Math::Scalar2MatrixBinaryTraits< E1, E2, F > C CDPL::Math::Scalar2QuaternionBinary1Traits< E1, E2, F > C CDPL::Math::Scalar2QuaternionBinary2Traits< E1, E2, F > ► C CDPL::Math::Scalar2QuaternionBinaryFunctor< Q, T > C CDPL::Math::QuaternionInverse< Q, T > C CDPL::Math::Scalar2QuaternionAddition< Q, T > C CDPL::Math::Scalar2QuaternionSubtraction< Q, T > C CDPL::Math::Scalar2VectorBinaryTraits< E1, E2, F > ► C CDPL::Math::Scalar3GridBooleanTernaryFunctor< G1, G2, T > C CDPL::Math::GridToleranceEquality< G1, G2, T > ► C CDPL::Math::Scalar3MatrixBooleanTernaryFunctor< M1, M2, T > C CDPL::Math::MatrixToleranceEquality< M1, M2, T > ► C CDPL::Math::Scalar3QuaternionBooleanTernaryFunctor< Q1, Q2, T > C CDPL::Math::QuaternionToleranceEquality< Q1, Q2, T > ► C CDPL::Math::Scalar3QuaternionTernaryFunctor< Q1, Q2, T > C CDPL::Math::QuaternionDivision< Q1, Q2, T > C CDPL::Math::Scalar3QuaternionTernaryTraits< E1, E2, E3, F > ► C CDPL::Math::Scalar3VectorBooleanTernaryFunctor< V1, V2, T > C CDPL::Math::VectorToleranceEquality< V1, V2, T > C CDPL::Math::ScalarAbsImpl< Signed > C CDPL::Math::ScalarAbsImpl< false > ► C CDPL::Math::ScalarBinaryAssignmentFunctor< T1, T2 > C CDPL::Math::ScalarAdditionAssignment< T1, T2 > C CDPL::Math::ScalarAssignment< T1, T2 > C CDPL::Math::ScalarDivisionAssignment< T1, T2 > C CDPL::Math::ScalarMultiplicationAssignment< T1, T2 > C CDPL::Math::ScalarSubtractionAssignment< T1, T2 > ► C CDPL::Math::ScalarBinaryFunctor< T1, T2 > C CDPL::Math::ScalarAddition< T1, T2 > C CDPL::Math::ScalarDivision< T1, T2 > C CDPL::Math::ScalarMultiplication< T1, T2 > C CDPL::Math::ScalarSubtraction< T1, T2 > ► C CDPL::Math::ScalarRealUnaryFunctor< T > C CDPL::Math::ScalarImaginary< T > C CDPL::Math::ScalarReal< T > ► C CDPL::Math::ScalarTraits< T > ► C CDPL::Math::TypeTraits< SparseContainerElement< C >::ValueType > C CDPL::Math::TypeTraits< SparseContainerElement< C > > C CDPL::Math::TypeTraits< T > ► C CDPL::Math::ScalarUnaryFunctor< T > C CDPL::Math::ScalarConjugation< T > C CDPL::Math::ScalarNegation< T > C CDPL::GRAIL::FeatureInteractionScoreGridCalculator::ScoreSumFunctor ► C CDPL::Pharm::ScreeningDBAccessor A class for accessing the data stored in pharmacophore screening databases C CDPL::Pharm::PSDScreeningDBAccessor A class for accessing pharmacophore screening databases in the built-in optimized format ► C CDPL::Pharm::ScreeningDBCreator A class for the creation of optimized pharmacophore screening databases C CDPL::Pharm::PSDScreeningDBCreator A class for the creation of optimized pharmacophore screening databases C CDPL::Pharm::ScreeningProcessor ScreeningProcessor C CDPL::Shape::ScreeningProcessor C CDPL::Shape::ScreeningSettings C CDPL::Pharm::ScreeningProcessor::SearchHit C CDPL::Shape::ShapeTanimotoScore C CDPL::Shape::ShapeTverskyScore C CDPL::Vis::SizeSpecification Specifies the value and type of a size attribute and defines how the value may change during processing steps C CDPL::Math::Slice< S, D > C CDPL::Math::Slice< SizeType, DifferenceType > C CDPL::Math::SparseContainerElement< C, K > C CDPL::Chem::SpatialEntityAlignment< T > SpatialEntityAlignment ► C CDPL::Chem::SpatialEntityAlignment< Feature > C CDPL::Pharm::PharmacophoreAlignment PharmacophoreAlignment C CDPL::Chem::StereoDescriptor A data structure for the storage and retrieval of stereochemical information about atoms and bonds C CDPL::Chem::StereoisomerGenerator StereoisomerGenerator ► C StreamType C CDPL::Util::CompressionStreamBase< CompAlgo, StreamType > C CDPL::Chem::StringDataBlockEntry Represents a data item in the structure or reaction data block of a MDL SD- or RD-File data record (see [CTFILE ]) C CDPL::Chem::ResonanceStructureGenerator::StructureData C CDPL::ConfGen::StructureGenerator C CDPL::ConfGen::StructureGeneratorSettings C CDPL::Chem::SubstructureHistogramCalculator SubstructureHistogramCalculator C CDPL::Chem::SubstructureSearch SubstructureSearch C CDPL::Chem::SurfaceAtomExtractor SurfaceAtomExtractor C CDPL::Chem::SymmetryClassCalculator::AtomNode::SVMNumberCmpFunc C CDPL::Chem::SymmetryClassCalculator::AtomNode::SymClassCmpFunc C CDPL::Chem::SymmetryClassCalculator SymmetryClassCalculator C CDPL::Shape::TanimotoComboScore ► C CDPL::Chem::TautomerGenerator TautomerGenerator C CDPL::Chem::DefaultTautomerGenerator DefaultTautomerGenerator ► C CDPL::Chem::TautomerizationRule TautomerizationRule ► C CDPL::Chem::PatternBasedTautomerizationRule PatternBasedTautomerizationRule C CDPL::Chem::AmideImidicAcidTautomerization AmideImidicAcidTautomerizationRule C CDPL::Chem::GenericHydrogen13ShiftTautomerization GenericHydrogen13ShiftTautomerizationRule C CDPL::Chem::GenericHydrogen15ShiftTautomerization GenericHydrogen15ShiftTautomerizationRule C CDPL::Chem::ImineEnamineTautomerization ImineEnamineTautomerizationRule C CDPL::Chem::KeteneYnolTautomerization KeteneYnolTautomerizationRule C CDPL::Chem::KetoEnolTautomerization KetoEnolTautomerizationRule C CDPL::Chem::LactamLactimTautomerization LactamLactimTautomerizationRule C CDPL::Chem::NitroAciTautomerization NitroAciTautomerizationRule C CDPL::Chem::NitrosoOximeTautomerization NitrosoOximeTautomerizationRule C CDPL::Chem::PhosphinicAcidTautomerization PhosphinicAcidTautomerizationRule C CDPL::Chem::SulfenicAcidTautomerization SulfenicAcidTautomerizationRule C CDPL::Chem::TautomerScore TautomerScore C CDPL::Chem::TopologicalEntityAlignment< T > TopologicalEntityAlignment C CDPL::Chem::TopologicalEntityAlignment< Feature > ► C CDPL::ConfGen::TorsionCategory C CDPL::ConfGen::TorsionLibrary C CDPL::ConfGen::TorsionDriver C CDPL::ConfGen::TorsionDriverSettings C CDPL::ConfGen::TorsionRule C CDPL::ConfGen::TorsionRuleMatch C CDPL::ConfGen::TorsionRuleMatcher C CDPL::Shape::TotalOverlapTanimotoScore C CDPL::Shape::TotalOverlapTverskyScore C CDPL::MolProp::TPSACalculator TPSACalculator C CDPL::Shape::TverskyComboScore C CDPL::ForceField::UFFAtomTypePropertyTable C CDPL::Math::UnitLower C CDPL::Math::UnitUpper C CDPL::Math::Upper C CDPL::Math::VectorArrayAlignmentCalculator< VA, V, T > C CDPL::Math::VectorArrayAlignmentCalculator< Math::Vector3DArray > C CDPL::Math::VectorBinary1Traits< E1, E2, F > C CDPL::Math::VectorBinary2Traits< E1, E2, F > ► C CDPL::Math::VectorBinaryFunctor< V1, V2 > C CDPL::Math::VectorCrossProduct< V1, V2 > ► C CDPL::Math::VectorBooleanBinaryFunctor< V1, V2 > C CDPL::Math::VectorEquality< V1, V2 > C CDPL::Math::VectorElementAccessor< E > C CDPL::Math::VectorElementAccessor< const E > C CDPL::Math::VectorIteratorTraits< E > C CDPL::Math::VectorIteratorTraits< const E > C CDPL::Math::VectorMatrixBinaryTraits< E1, E2, F > ► C CDPL::Math::VectorMatrixUnaryFunctor< V > C CDPL::Math::CrossProductMatrixFromVector< V > C CDPL::Math::DiagonalMatrixFromVector< V > C CDPL::Math::VectorMatrixUnaryTraits< E, F > ► C CDPL::Math::VectorScalarBinaryFunctor< V1, V2 > C CDPL::Math::VectorAngleCosine< V1, V2, T > C CDPL::Math::VectorInnerProduct< V1, V2 > ► C CDPL::Math::VectorScalarIndexUnaryFunctor< V > C CDPL::Math::VectorNormInfinityIndex< V > ► C CDPL::Math::VectorScalarRealUnaryFunctor< V > C CDPL::Math::VectorNorm1< V > C CDPL::Math::VectorNorm2< V > C CDPL::Math::VectorNormInfinity< V > ► C CDPL::Math::VectorScalarUnaryFunctor< V > C CDPL::Math::VectorElementSum< V > ► C CDPL::Math::VectorTemporaryTraits< V > C CDPL::Math::VectorTemporaryTraits< HomogenousCoordsAdapter< V > > C CDPL::Math::VectorTemporaryTraits< VectorRange< V > > C CDPL::Math::VectorTemporaryTraits< VectorReference< V > > C CDPL::Math::VectorTemporaryTraits< VectorSlice< V > > C CDPL::Math::VectorTemporaryTraits< const HomogenousCoordsAdapter< V > > C CDPL::Math::VectorTemporaryTraits< const VectorRange< V > > C CDPL::Math::VectorTemporaryTraits< const VectorReference< V > > C CDPL::Math::VectorTemporaryTraits< const VectorSlice< V > > C CDPL::Math::VectorTemporaryTraits< const QuaternionVectorAdapter< Q > > ► C CDPL::Math::VectorTemporaryTraits< M > C CDPL::Math::VectorTemporaryTraits< MatrixColumn< M > > C CDPL::Math::VectorTemporaryTraits< MatrixRange< M > > C CDPL::Math::VectorTemporaryTraits< MatrixReference< M > > C CDPL::Math::VectorTemporaryTraits< MatrixRow< M > > C CDPL::Math::VectorTemporaryTraits< MatrixSlice< M > > C CDPL::Math::VectorTemporaryTraits< MatrixTranspose< M > > C CDPL::Math::VectorTemporaryTraits< TriangularAdapter< M, Tri > > C CDPL::Math::VectorTemporaryTraits< const MatrixColumn< M > > C CDPL::Math::VectorTemporaryTraits< const MatrixRange< M > > C CDPL::Math::VectorTemporaryTraits< const MatrixReference< M > > C CDPL::Math::VectorTemporaryTraits< const MatrixRow< M > > C CDPL::Math::VectorTemporaryTraits< const MatrixSlice< M > > C CDPL::Math::VectorTemporaryTraits< const MatrixTranspose< M > > C CDPL::Math::VectorTemporaryTraits< const TriangularAdapter< M, Tri > > C CDPL::Math::VectorTemporaryTraits< QuaternionVectorAdapter< Q > > C CDPL::Math::VectorUnaryTraits< E, F > C CDPL::Util::DGCoordinatesGenerator< 3, T >::VolumeConstraint C CDPL::Pharm::XBondingInteractionConstraint XBondingInteractionConstraint C CDPL::MolProp::XLogPCalculator XLogPCalculator C bool C CMatrix< double, 4, 4 > C Matrix< double > C Vector< double > ► C VectorArray< Vector2D > ► C CDPL::Vis::PointArray2D Stores a set of points in 2D space C CDPL::Vis::LineSegmentListPrimitive2D A graphics primitive representing a list of disjoint line segments C CDPL::Vis::PointListPrimitive2D A graphics primitive representing a list of points C CDPL::Vis::PolygonPrimitive2D A graphics primitive representing a polygon C CDPL::Vis::PolylinePrimitive2D A graphics primitive representing a set of connected line segments ► C VectorArray< Vector3D > C CDPL::ConfGen::ConformerData 
1.9.1
