__call__(Chem.MolecularGraph molgraph, Pharmacophore pharm) | CDPL.Pharm.PatternBasedFeatureGenerator | |
__init__() | CDPL.Pharm.HydrophobicFeatureGenerator | |
__init__(Chem.MolecularGraph molgraph, Pharmacophore pharm) | CDPL.Pharm.HydrophobicFeatureGenerator | |
__init__(HydrophobicFeatureGenerator gen) | CDPL.Pharm.HydrophobicFeatureGenerator | |
CDPL::Pharm::PatternBasedFeatureGenerator.__init__(PatternBasedFeatureGenerator gen) | CDPL.Pharm.PatternBasedFeatureGenerator | |
addExcludePattern(Chem.MolecularGraph pattern) | CDPL.Pharm.PatternBasedFeatureGenerator | |
addIncludePattern(Chem.MolecularGraph pattern, int type, float tol, int geom, float length=1.0) | CDPL.Pharm.PatternBasedFeatureGenerator | |
assign(HydrophobicFeatureGenerator gen) | CDPL.Pharm.HydrophobicFeatureGenerator | |
CDPL::Pharm::PatternBasedFeatureGenerator.assign(PatternBasedFeatureGenerator gen) | CDPL.Pharm.PatternBasedFeatureGenerator | |
atomCoordsFunction (defined in CDPL.Pharm.FeatureGenerator) | CDPL.Pharm.FeatureGenerator | static |
chainHydThreshold (defined in CDPL.Pharm.HydrophobicFeatureGenerator) | CDPL.Pharm.HydrophobicFeatureGenerator | static |
clearExcludePatterns() | CDPL.Pharm.PatternBasedFeatureGenerator | |
clearIncludePatterns() | CDPL.Pharm.PatternBasedFeatureGenerator | |
clone() | CDPL.Pharm.FeatureGenerator | |
DEF_FEATURE_GEOM (defined in CDPL.Pharm.HydrophobicFeatureGenerator) | CDPL.Pharm.HydrophobicFeatureGenerator | static |
DEF_FEATURE_TOL (defined in CDPL.Pharm.HydrophobicFeatureGenerator) | CDPL.Pharm.HydrophobicFeatureGenerator | static |
DEF_FEATURE_TYPE (defined in CDPL.Pharm.HydrophobicFeatureGenerator) | CDPL.Pharm.HydrophobicFeatureGenerator | static |
DEF_HYD_THRESHOLD_CHAIN (defined in CDPL.Pharm.HydrophobicFeatureGenerator) | CDPL.Pharm.HydrophobicFeatureGenerator | static |
DEF_HYD_THRESHOLD_GROUP (defined in CDPL.Pharm.HydrophobicFeatureGenerator) | CDPL.Pharm.HydrophobicFeatureGenerator | static |
DEF_HYD_THRESHOLD_RING (defined in CDPL.Pharm.HydrophobicFeatureGenerator) | CDPL.Pharm.HydrophobicFeatureGenerator | static |
featureGeometry (defined in CDPL.Pharm.HydrophobicFeatureGenerator) | CDPL.Pharm.HydrophobicFeatureGenerator | static |
featureTolerance (defined in CDPL.Pharm.HydrophobicFeatureGenerator) | CDPL.Pharm.HydrophobicFeatureGenerator | static |
featureType (defined in CDPL.Pharm.HydrophobicFeatureGenerator) | CDPL.Pharm.HydrophobicFeatureGenerator | static |
generate(Chem.MolecularGraph molgraph, Pharmacophore pharm) | CDPL.Pharm.PatternBasedFeatureGenerator | |
getAtom3DCoordinatesFunction() | CDPL.Pharm.FeatureGenerator | |
getChainHydrophobicityThreshold() | CDPL.Pharm.HydrophobicFeatureGenerator | |
getFeatureGeometry() | CDPL.Pharm.HydrophobicFeatureGenerator | |
getFeatureTolerance() | CDPL.Pharm.HydrophobicFeatureGenerator | |
getFeatureType() | CDPL.Pharm.HydrophobicFeatureGenerator | |
getGroupHydrophobicityThreshold() | CDPL.Pharm.HydrophobicFeatureGenerator | |
getObjectID() | CDPL.Pharm.FeatureGenerator | |
getRingHydrophobicityThreshold() | CDPL.Pharm.HydrophobicFeatureGenerator | |
groupHydThreshold (defined in CDPL.Pharm.HydrophobicFeatureGenerator) | CDPL.Pharm.HydrophobicFeatureGenerator | static |
objectID (defined in CDPL.Pharm.FeatureGenerator) | CDPL.Pharm.FeatureGenerator | static |
ringHydThreshold (defined in CDPL.Pharm.HydrophobicFeatureGenerator) | CDPL.Pharm.HydrophobicFeatureGenerator | static |
setAtom3DCoordinatesFunction(Chem.Atom3DCoordinatesFunction func) | CDPL.Pharm.FeatureGenerator | |
setChainHydrophobicityThreshold(float thresh) | CDPL.Pharm.HydrophobicFeatureGenerator | |
setFeatureGeometry(int geom) | CDPL.Pharm.HydrophobicFeatureGenerator | |
setFeatureTolerance(float tol) | CDPL.Pharm.HydrophobicFeatureGenerator | |
setFeatureType(int type) | CDPL.Pharm.HydrophobicFeatureGenerator | |
setGroupHydrophobicityThreshold(float thresh) | CDPL.Pharm.HydrophobicFeatureGenerator | |
setRingHydrophobicityThreshold(float thresh) | CDPL.Pharm.HydrophobicFeatureGenerator | |