addEnergyWindowRange(std::size_t num_rot_bonds, double win_size) | CDPL::ConfGen::ConformerGeneratorSettings | |
addMaxNumOutputConformersRange(std::size_t num_rot_bonds, std::size_t max_num) | CDPL::ConfGen::ConformerGeneratorSettings | |
addMinRMSDRange(std::size_t num_rot_bonds, double min_rmsd) | CDPL::ConfGen::ConformerGeneratorSettings | |
clearEnergyWindowRanges() | CDPL::ConfGen::ConformerGeneratorSettings | |
clearMaxNumOutputConformersRanges() | CDPL::ConfGen::ConformerGeneratorSettings | |
clearMinRMSDRanges() | CDPL::ConfGen::ConformerGeneratorSettings | |
ConformerGeneratorSettings() | CDPL::ConfGen::ConformerGeneratorSettings | |
DEFAULT | CDPL::ConfGen::ConformerGeneratorSettings | static |
enumerateRings(bool enumerate) | CDPL::ConfGen::ConformerGeneratorSettings | |
enumerateRings() const | CDPL::ConfGen::ConformerGeneratorSettings | |
generateCoordinatesFromScratch(bool generate) | CDPL::ConfGen::ConformerGeneratorSettings | |
generateCoordinatesFromScratch() const | CDPL::ConfGen::ConformerGeneratorSettings | |
getConvergenceCheckCycleSize() const | CDPL::ConfGen::ConformerGeneratorSettings | |
getDielectricConstant() const | CDPL::ConfGen::ConformerGeneratorSettings | |
getDistanceExponent() const | CDPL::ConfGen::ConformerGeneratorSettings | |
getEnergyWindow() const | CDPL::ConfGen::ConformerGeneratorSettings | |
getEnergyWindow(std::size_t num_rot_bonds) const | CDPL::ConfGen::ConformerGeneratorSettings | |
getForceFieldTypeStochastic() const | CDPL::ConfGen::ConformerGeneratorSettings | |
getForceFieldTypeSystematic() const | CDPL::ConfGen::ConformerGeneratorSettings | |
getFragmentBuildSettings() | CDPL::ConfGen::ConformerGeneratorSettings | |
getFragmentBuildSettings() const | CDPL::ConfGen::ConformerGeneratorSettings | |
getMacrocycleRotorBondCountThreshold() const | CDPL::ConfGen::ConformerGeneratorSettings | |
getMaxNumOutputConformers() const | CDPL::ConfGen::ConformerGeneratorSettings | |
getMaxNumOutputConformers(std::size_t num_rot_bonds) const | CDPL::ConfGen::ConformerGeneratorSettings | |
getMaxNumRefinementIterations() const | CDPL::ConfGen::ConformerGeneratorSettings | |
getMaxNumSampledConformers() const | CDPL::ConfGen::ConformerGeneratorSettings | |
getMaxPoolSize() const | CDPL::ConfGen::ConformerGeneratorSettings | |
getMaxRotatableBondCount() const | CDPL::ConfGen::ConformerGeneratorSettings | |
getMinRMSD() const | CDPL::ConfGen::ConformerGeneratorSettings | |
getMinRMSD(std::size_t num_rot_bonds) const | CDPL::ConfGen::ConformerGeneratorSettings | |
getNitrogenEnumerationMode() const | CDPL::ConfGen::ConformerGeneratorSettings | |
getRefinementTolerance() const | CDPL::ConfGen::ConformerGeneratorSettings | |
getSamplingMode() const | CDPL::ConfGen::ConformerGeneratorSettings | |
getTimeout() const | CDPL::ConfGen::ConformerGeneratorSettings | |
includeInputCoordinates(bool include) | CDPL::ConfGen::ConformerGeneratorSettings | |
includeInputCoordinates() const | CDPL::ConfGen::ConformerGeneratorSettings | |
LARGE_SET_DENSE | CDPL::ConfGen::ConformerGeneratorSettings | static |
LARGE_SET_DIVERSE | CDPL::ConfGen::ConformerGeneratorSettings | static |
MEDIUM_SET_DENSE | CDPL::ConfGen::ConformerGeneratorSettings | static |
MEDIUM_SET_DIVERSE | CDPL::ConfGen::ConformerGeneratorSettings | static |
sampleAngleToleranceRanges(bool sample) | CDPL::ConfGen::ConformerGeneratorSettings | |
sampleAngleToleranceRanges() const | CDPL::ConfGen::ConformerGeneratorSettings | |
sampleHeteroAtomHydrogens(bool sample) | CDPL::ConfGen::ConformerGeneratorSettings | |
sampleHeteroAtomHydrogens() const | CDPL::ConfGen::ConformerGeneratorSettings | |
setConvergenceCheckCycleSize(std::size_t size) | CDPL::ConfGen::ConformerGeneratorSettings | |
setDielectricConstant(double de_const) | CDPL::ConfGen::ConformerGeneratorSettings | |
setDistanceExponent(double exponent) | CDPL::ConfGen::ConformerGeneratorSettings | |
setEnergyWindow(double win_size) | CDPL::ConfGen::ConformerGeneratorSettings | |
setForceFieldTypeStochastic(unsigned int type) | CDPL::ConfGen::ConformerGeneratorSettings | |
setForceFieldTypeSystematic(unsigned int type) | CDPL::ConfGen::ConformerGeneratorSettings | |
setMacrocycleRotorBondCountThreshold(std::size_t min_count) | CDPL::ConfGen::ConformerGeneratorSettings | |
setMaxNumOutputConformers(std::size_t max_num) | CDPL::ConfGen::ConformerGeneratorSettings | |
setMaxNumRefinementIterations(std::size_t max_iter) | CDPL::ConfGen::ConformerGeneratorSettings | |
setMaxNumSampledConformers(std::size_t max_num) | CDPL::ConfGen::ConformerGeneratorSettings | |
setMaxPoolSize(std::size_t max_size) | CDPL::ConfGen::ConformerGeneratorSettings | |
setMaxRotatableBondCount(long max_count) | CDPL::ConfGen::ConformerGeneratorSettings | |
setMinRMSD(double min_rmsd) | CDPL::ConfGen::ConformerGeneratorSettings | |
setNitrogenEnumerationMode(unsigned int mode) | CDPL::ConfGen::ConformerGeneratorSettings | |
setRefinementTolerance(double tol) | CDPL::ConfGen::ConformerGeneratorSettings | |
setSamplingMode(unsigned int mode) | CDPL::ConfGen::ConformerGeneratorSettings | |
setTimeout(std::size_t mil_secs) | CDPL::ConfGen::ConformerGeneratorSettings | |
SMALL_SET_DENSE | CDPL::ConfGen::ConformerGeneratorSettings | static |
SMALL_SET_DIVERSE | CDPL::ConfGen::ConformerGeneratorSettings | static |
strictForceFieldParameterization(bool strict) | CDPL::ConfGen::ConformerGeneratorSettings | |
strictForceFieldParameterization() const | CDPL::ConfGen::ConformerGeneratorSettings | |