Chemical Data Processing Library C++ API - Version 1.4.0
PosIonizableFeatureGenerator.hpp
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1 /*
2  * PosIonizableFeatureGenerator.hpp
3  *
4  * This file is part of the Chemical Data Processing Toolkit
5  *
6  * Copyright (C) 2003 Thomas Seidel <thomas.seidel@univie.ac.at>
7  *
8  * This library is free software; you can redistribute it and/or
9  * modify it under the terms of the GNU Lesser General Public
10  * License as published by the Free Software Foundation; either
11  * version 2 of the License, or (at your option) any later version.
12  *
13  * This library is distributed in the hope that it will be useful,
14  * but WITHOUT ANY WARRANTY; without even the implied warranty of
15  * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
16  * Lesser General Public License for more details.
17  *
18  * You should have received a copy of the GNU Lesser General Public License
19  * along with this library; see the file COPYING. If not, write to
20  * the Free Software Foundation, Inc., 59 Temple Place - Suite 330,
21  * Boston, MA 02111-1307, USA.
22  */
23 
29 #ifndef CDPL_PHARM_POSIONIZABLEFEATUREGENERATOR_HPP
30 #define CDPL_PHARM_POSIONIZABLEFEATUREGENERATOR_HPP
31 
32 #include "CDPL/Pharm/APIPrefix.hpp"
34 
35 
36 namespace CDPL
37 {
38 
39  namespace Pharm
40  {
41 
47  {
48 
49  public:
55  PosIonizableFeatureGenerator(bool chgd_groups_only);
56 
65  PosIonizableFeatureGenerator(const Chem::MolecularGraph& molgraph, Pharmacophore& pharm, bool chgd_groups_only);
66 
67  private:
68  void init(bool chgd_groups_only);
69  };
70  } // namespace Pharm
71 } // namespace CDPL
72 
73 #endif // CDPL_PHARM_POSIONIZABLEFEATUREGENERATOR_HPP
Definition of class CDPL::Pharm::PatternBasedFeatureGenerator.
Definition of the preprocessor macro CDPL_PHARM_API.
#define CDPL_PHARM_API
Tells the compiler/linker which classes, functions and variables are part of the library API.
Abstract base class for representations of a chemical structure as a graph of bonded atoms.
Definition: MolecularGraph.hpp:57
Pharm::FeatureGenerator implementation that perceives pharmacophore features by SMARTS-like substruct...
Definition: PatternBasedFeatureGenerator.hpp:59
Abstract base class for mutable containers of Pharm::Feature instances representing a pharmacophore m...
Definition: Pharmacophore.hpp:53
Pharm::FeatureGenerator implementation that perceives positive ionizable group features by matching a...
Definition: PosIonizableFeatureGenerator.hpp:47
PosIonizableFeatureGenerator(const Chem::MolecularGraph &molgraph, Pharmacophore &pharm, bool chgd_groups_only)
Perceives the positive ionizable group features of the molecular graph molgraph and adds them to the ...
PosIonizableFeatureGenerator(bool chgd_groups_only)
Constructs the PosIonizableFeatureGenerator instance.
The namespace of the Chemical Data Processing Library.