Biomol/ControlParameterFunctions.hpp File Reference

Declaration of convenience functions for control-parameter handling. More...

#include "CDPL/Biomol/APIPrefix.hpp"
#include "CDPL/Biomol/ResidueDictionary.hpp"
#include "CDPL/Biomol/MMCIFDataProcessingFunction.hpp"

Go to the source code of this file.

Namespaces
	CDPL
	The namespace of the Chemical Data Processing Library.
	CDPL::Base
	Contains core framework classes and functions.
	CDPL::Biomol
	Contains classes and functions related to biological macromolecules.

Functions
CDPL_BIOMOL_API bool	CDPL::Biomol::getStrictErrorCheckingParameter (const Base::ControlParameterContainer &cntnr)
	Returns the value of the Biomol::ControlParameter::STRICT_ERROR_CHECKING parameter of cntnr. More...
CDPL_BIOMOL_API void	CDPL::Biomol::setStrictErrorCheckingParameter (Base::ControlParameterContainer &cntnr, bool strict)
	Sets the Biomol::ControlParameter::STRICT_ERROR_CHECKING parameter of cntnr to strict. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::hasStrictErrorCheckingParameter (const Base::ControlParameterContainer &cntnr)
	Tells whether cntnr carries an explicit Biomol::ControlParameter::STRICT_ERROR_CHECKING parameter. More...
CDPL_BIOMOL_API void	CDPL::Biomol::clearStrictErrorCheckingParameter (Base::ControlParameterContainer &cntnr)
	Removes the Biomol::ControlParameter::STRICT_ERROR_CHECKING parameter from cntnr. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::getCheckLineLengthParameter (const Base::ControlParameterContainer &cntnr)
	Returns the value of the Biomol::ControlParameter::CHECK_LINE_LENGTH parameter of cntnr. More...
CDPL_BIOMOL_API void	CDPL::Biomol::setCheckLineLengthParameter (Base::ControlParameterContainer &cntnr, bool check)
	Sets the Biomol::ControlParameter::CHECK_LINE_LENGTH parameter of cntnr to check. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::hasCheckLineLengthParameter (const Base::ControlParameterContainer &cntnr)
	Tells whether cntnr carries an explicit Biomol::ControlParameter::CHECK_LINE_LENGTH parameter. More...
CDPL_BIOMOL_API void	CDPL::Biomol::clearCheckLineLengthParameter (Base::ControlParameterContainer &cntnr)
	Removes the Biomol::ControlParameter::CHECK_LINE_LENGTH parameter from cntnr. More...
CDPL_BIOMOL_API const ResidueDictionary::SharedPointer &	CDPL::Biomol::getResidueDictionaryParameter (const Base::ControlParameterContainer &cntnr)
	Returns the value of the Biomol::ControlParameter::RESIDUE_DICTIONARY parameter of cntnr. More...
CDPL_BIOMOL_API void	CDPL::Biomol::setResidueDictionaryParameter (Base::ControlParameterContainer &cntnr, const ResidueDictionary::SharedPointer &dict)
	Sets the Biomol::ControlParameter::RESIDUE_DICTIONARY parameter of cntnr to dict. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::hasResidueDictionaryParameter (const Base::ControlParameterContainer &cntnr)
	Tells whether cntnr carries an explicit Biomol::ControlParameter::RESIDUE_DICTIONARY parameter. More...
CDPL_BIOMOL_API void	CDPL::Biomol::clearResidueDictionaryParameter (Base::ControlParameterContainer &cntnr)
	Removes the Biomol::ControlParameter::RESIDUE_DICTIONARY parameter from cntnr. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::getApplyDictFormalChargesParameter (const Base::ControlParameterContainer &cntnr)
	Returns the value of the Biomol::ControlParameter::APPLY_DICT_FORMAL_CHARGES parameter of cntnr. More...
CDPL_BIOMOL_API void	CDPL::Biomol::setApplyDictFormalChargesParameter (Base::ControlParameterContainer &cntnr, bool apply)
	Sets the Biomol::ControlParameter::APPLY_DICT_FORMAL_CHARGES parameter of cntnr to apply. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::hasApplyDictFormalChargesParameter (const Base::ControlParameterContainer &cntnr)
	Tells whether cntnr carries an explicit Biomol::ControlParameter::APPLY_DICT_FORMAL_CHARGES parameter. More...
CDPL_BIOMOL_API void	CDPL::Biomol::clearApplyDictFormalChargesParameter (Base::ControlParameterContainer &cntnr)
	Removes the Biomol::ControlParameter::APPLY_DICT_FORMAL_CHARGES parameter from cntnr. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::getApplyDictAtomTypesParameter (const Base::ControlParameterContainer &cntnr)
	Returns the value of the Biomol::ControlParameter::APPLY_DICT_ATOM_TYPES parameter of cntnr. More...
CDPL_BIOMOL_API void	CDPL::Biomol::setApplyDictAtomTypesParameter (Base::ControlParameterContainer &cntnr, bool apply)
	Sets the Biomol::ControlParameter::APPLY_DICT_ATOM_TYPES parameter of cntnr to apply. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::hasApplyDictAtomTypesParameter (const Base::ControlParameterContainer &cntnr)
	Tells whether cntnr carries an explicit Biomol::ControlParameter::APPLY_DICT_ATOM_TYPES parameter. More...
CDPL_BIOMOL_API void	CDPL::Biomol::clearApplyDictAtomTypesParameter (Base::ControlParameterContainer &cntnr)
	Removes the Biomol::ControlParameter::APPLY_DICT_ATOM_TYPES parameter from cntnr. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::getCalcMissingFormalChargesParameter (const Base::ControlParameterContainer &cntnr)
	Returns the value of the Biomol::ControlParameter::CALC_MISSING_FORMAL_CHARGES parameter of cntnr. More...
CDPL_BIOMOL_API void	CDPL::Biomol::setCalcMissingFormalChargesParameter (Base::ControlParameterContainer &cntnr, bool calc)
	Sets the Biomol::ControlParameter::CALC_MISSING_FORMAL_CHARGES parameter of cntnr to calc. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::hasCalcMissingFormalChargesParameter (const Base::ControlParameterContainer &cntnr)
	Tells whether cntnr carries an explicit Biomol::ControlParameter::CALC_MISSING_FORMAL_CHARGES parameter. More...
CDPL_BIOMOL_API void	CDPL::Biomol::clearCalcMissingFormalChargesParameter (Base::ControlParameterContainer &cntnr)
	Removes the Biomol::ControlParameter::CALC_MISSING_FORMAL_CHARGES parameter from cntnr. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::getPerceiveMissingBondOrdersParameter (const Base::ControlParameterContainer &cntnr)
	Returns the value of the Biomol::ControlParameter::PERCEIVE_MISSING_BOND_ORDERS parameter of cntnr. More...
CDPL_BIOMOL_API void	CDPL::Biomol::setPerceiveMissingBondOrdersParameter (Base::ControlParameterContainer &cntnr, bool perceive)
	Sets the Biomol::ControlParameter::PERCEIVE_MISSING_BOND_ORDERS parameter of cntnr to perceive. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::hasPerceiveMissingBondOrdersParameter (const Base::ControlParameterContainer &cntnr)
	Tells whether cntnr carries an explicit Biomol::ControlParameter::PERCEIVE_MISSING_BOND_ORDERS parameter. More...
CDPL_BIOMOL_API void	CDPL::Biomol::clearPerceiveMissingBondOrdersParameter (Base::ControlParameterContainer &cntnr)
	Removes the Biomol::ControlParameter::PERCEIVE_MISSING_BOND_ORDERS parameter from cntnr. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::getCombineInterferingResidueCoordinatesParameter (const Base::ControlParameterContainer &cntnr)
	Returns the value of the Biomol::ControlParameter::COMBINE_INTERFERING_RESIDUE_COORDINATES parameter of cntnr. More...
CDPL_BIOMOL_API void	CDPL::Biomol::setCombineInterferingResidueCoordinatesParameter (Base::ControlParameterContainer &cntnr, bool comb)
	Sets the Biomol::ControlParameter::COMBINE_INTERFERING_RESIDUE_COORDINATES parameter of cntnr to comb. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::hasCombineInterferingResidueCoordinatesParameter (const Base::ControlParameterContainer &cntnr)
	Tells whether cntnr carries an explicit Biomol::ControlParameter::COMBINE_INTERFERING_RESIDUE_COORDINATES parameter. More...
CDPL_BIOMOL_API void	CDPL::Biomol::clearCombineInterferingResidueCoordinatesParameter (Base::ControlParameterContainer &cntnr)
	Removes the Biomol::ControlParameter::COMBINE_INTERFERING_RESIDUE_COORDINATES parameter from cntnr. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::getPDBApplyDictAtomBondingToStdResiduesParameter (const Base::ControlParameterContainer &cntnr)
	Returns the value of the Biomol::ControlParameter::PDB_APPLY_DICT_ATOM_BONDING_TO_STD_RESIDUES parameter of cntnr. More...
CDPL_BIOMOL_API void	CDPL::Biomol::setPDBApplyDictAtomBondingToStdResiduesParameter (Base::ControlParameterContainer &cntnr, bool apply)
	Sets the Biomol::ControlParameter::PDB_APPLY_DICT_ATOM_BONDING_TO_STD_RESIDUES parameter of cntnr to apply. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::hasPDBApplyDictAtomBondingToStdResiduesParameter (const Base::ControlParameterContainer &cntnr)
	Tells whether cntnr carries an explicit Biomol::ControlParameter::PDB_APPLY_DICT_ATOM_BONDING_TO_STD_RESIDUES parameter. More...
CDPL_BIOMOL_API void	CDPL::Biomol::clearPDBApplyDictAtomBondingToStdResiduesParameter (Base::ControlParameterContainer &cntnr)
	Removes the Biomol::ControlParameter::PDB_APPLY_DICT_ATOM_BONDING_TO_STD_RESIDUES parameter from cntnr. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::getPDBApplyDictAtomBondingToNonStdResiduesParameter (const Base::ControlParameterContainer &cntnr)
	Returns the value of the Biomol::ControlParameter::PDB_APPLY_DICT_ATOM_BONDING_TO_NON_STD_RESIDUES parameter of cntnr. More...
CDPL_BIOMOL_API void	CDPL::Biomol::setPDBApplyDictAtomBondingToNonStdResiduesParameter (Base::ControlParameterContainer &cntnr, bool apply)
	Sets the Biomol::ControlParameter::PDB_APPLY_DICT_ATOM_BONDING_TO_NON_STD_RESIDUES parameter of cntnr to apply. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::hasPDBApplyDictAtomBondingToNonStdResiduesParameter (const Base::ControlParameterContainer &cntnr)
	Tells whether cntnr carries an explicit Biomol::ControlParameter::PDB_APPLY_DICT_ATOM_BONDING_TO_NON_STD_RESIDUES parameter. More...
CDPL_BIOMOL_API void	CDPL::Biomol::clearPDBApplyDictAtomBondingToNonStdResiduesParameter (Base::ControlParameterContainer &cntnr)
	Removes the Biomol::ControlParameter::PDB_APPLY_DICT_ATOM_BONDING_TO_NON_STD_RESIDUES parameter from cntnr. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::getPDBApplyDictBondOrdersToStdResiduesParameter (const Base::ControlParameterContainer &cntnr)
	Returns the value of the Biomol::ControlParameter::PDB_APPLY_DICT_BOND_ORDERS_TO_STD_RESIDUES parameter of cntnr. More...
CDPL_BIOMOL_API void	CDPL::Biomol::setPDBApplyDictBondOrdersToStdResiduesParameter (Base::ControlParameterContainer &cntnr, bool apply)
	Sets the Biomol::ControlParameter::PDB_APPLY_DICT_BOND_ORDERS_TO_STD_RESIDUES parameter of cntnr to apply. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::hasPDBApplyDictBondOrdersToStdResiduesParameter (const Base::ControlParameterContainer &cntnr)
	Tells whether cntnr carries an explicit Biomol::ControlParameter::PDB_APPLY_DICT_BOND_ORDERS_TO_STD_RESIDUES parameter. More...
CDPL_BIOMOL_API void	CDPL::Biomol::clearPDBApplyDictBondOrdersToStdResiduesParameter (Base::ControlParameterContainer &cntnr)
	Removes the Biomol::ControlParameter::PDB_APPLY_DICT_BOND_ORDERS_TO_STD_RESIDUES parameter from cntnr. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::getPDBApplyDictBondOrdersToNonStdResiduesParameter (const Base::ControlParameterContainer &cntnr)
	Returns the value of the Biomol::ControlParameter::PDB_APPLY_DICT_BOND_ORDERS_TO_NON_STD_RESIDUES parameter of cntnr. More...
CDPL_BIOMOL_API void	CDPL::Biomol::setPDBApplyDictBondOrdersToNonStdResiduesParameter (Base::ControlParameterContainer &cntnr, bool apply)
	Sets the Biomol::ControlParameter::PDB_APPLY_DICT_BOND_ORDERS_TO_NON_STD_RESIDUES parameter of cntnr to apply. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::hasPDBApplyDictBondOrdersToNonStdResiduesParameter (const Base::ControlParameterContainer &cntnr)
	Tells whether cntnr carries an explicit Biomol::ControlParameter::PDB_APPLY_DICT_BOND_ORDERS_TO_NON_STD_RESIDUES parameter. More...
CDPL_BIOMOL_API void	CDPL::Biomol::clearPDBApplyDictBondOrdersToNonStdResiduesParameter (Base::ControlParameterContainer &cntnr)
	Removes the Biomol::ControlParameter::PDB_APPLY_DICT_BOND_ORDERS_TO_NON_STD_RESIDUES parameter from cntnr. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::getPDBIgnoreCONECTRecordsParameter (const Base::ControlParameterContainer &cntnr)
	Returns the value of the Biomol::ControlParameter::PDB_IGNORE_CONECT_RECORDS parameter of cntnr. More...
CDPL_BIOMOL_API void	CDPL::Biomol::setPDBIgnoreCONECTRecordsParameter (Base::ControlParameterContainer &cntnr, bool ignore)
	Sets the Biomol::ControlParameter::PDB_IGNORE_CONECT_RECORDS parameter of cntnr to ignore. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::hasPDBIgnoreCONECTRecordsParameter (const Base::ControlParameterContainer &cntnr)
	Tells whether cntnr carries an explicit Biomol::ControlParameter::PDB_IGNORE_CONECT_RECORDS parameter. More...
CDPL_BIOMOL_API void	CDPL::Biomol::clearPDBIgnoreCONECTRecordsParameter (Base::ControlParameterContainer &cntnr)
	Removes the Biomol::ControlParameter::PDB_IGNORE_CONECT_RECORDS parameter from cntnr. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::getPDBDeduceBondOrdersFromCONECTRecordsParameter (const Base::ControlParameterContainer &cntnr)
	Returns the value of the Biomol::ControlParameter::PDB_DEDUCE_BOND_ORDERS_FROM_CONECT_RECORDS parameter of cntnr. More...
CDPL_BIOMOL_API void	CDPL::Biomol::setPDBDeduceBondOrdersFromCONECTRecordsParameter (Base::ControlParameterContainer &cntnr, bool deduce)
	Sets the Biomol::ControlParameter::PDB_DEDUCE_BOND_ORDERS_FROM_CONECT_RECORDS parameter of cntnr to deduce. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::hasPDBDeduceBondOrdersFromCONECTRecordsParameter (const Base::ControlParameterContainer &cntnr)
	Tells whether cntnr carries an explicit Biomol::ControlParameter::PDB_DEDUCE_BOND_ORDERS_FROM_CONECT_RECORDS parameter. More...
CDPL_BIOMOL_API void	CDPL::Biomol::clearPDBDeduceBondOrdersFromCONECTRecordsParameter (Base::ControlParameterContainer &cntnr)
	Removes the Biomol::ControlParameter::PDB_DEDUCE_BOND_ORDERS_FROM_CONECT_RECORDS parameter from cntnr. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::getPDBIgnoreFormalChargeFieldParameter (const Base::ControlParameterContainer &cntnr)
	Returns the value of the Biomol::ControlParameter::PDB_IGNORE_FORMAL_CHARGE_FIELD parameter of cntnr. More...
CDPL_BIOMOL_API void	CDPL::Biomol::setPDBIgnoreFormalChargeFieldParameter (Base::ControlParameterContainer &cntnr, bool ignore)
	Sets the Biomol::ControlParameter::PDB_IGNORE_FORMAL_CHARGE_FIELD parameter of cntnr to ignore. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::hasPDBIgnoreFormalChargeFieldParameter (const Base::ControlParameterContainer &cntnr)
	Tells whether cntnr carries an explicit Biomol::ControlParameter::PDB_IGNORE_FORMAL_CHARGE_FIELD parameter. More...
CDPL_BIOMOL_API void	CDPL::Biomol::clearPDBIgnoreFormalChargeFieldParameter (Base::ControlParameterContainer &cntnr)
	Removes the Biomol::ControlParameter::PDB_IGNORE_FORMAL_CHARGE_FIELD parameter from cntnr. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::getPDBEvaluateMASTERRecordParameter (const Base::ControlParameterContainer &cntnr)
	Returns the value of the Biomol::ControlParameter::PDB_EVALUATE_MASTER_RECORD parameter of cntnr. More...
CDPL_BIOMOL_API void	CDPL::Biomol::setPDBEvaluateMASTERRecordParameter (Base::ControlParameterContainer &cntnr, bool eval)
	Sets the Biomol::ControlParameter::PDB_EVALUATE_MASTER_RECORD parameter of cntnr to eval. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::hasPDBEvaluateMASTERRecordParameter (const Base::ControlParameterContainer &cntnr)
	Tells whether cntnr carries an explicit Biomol::ControlParameter::PDB_EVALUATE_MASTER_RECORD parameter. More...
CDPL_BIOMOL_API void	CDPL::Biomol::clearPDBEvaluateMASTERRecordParameter (Base::ControlParameterContainer &cntnr)
	Removes the Biomol::ControlParameter::PDB_EVALUATE_MASTER_RECORD parameter from cntnr. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::getPDBTruncateLinesParameter (const Base::ControlParameterContainer &cntnr)
	Returns the value of the Biomol::ControlParameter::PDB_TRUNCATE_LINES parameter of cntnr. More...
CDPL_BIOMOL_API void	CDPL::Biomol::setPDBTruncateLinesParameter (Base::ControlParameterContainer &cntnr, bool trunc)
	Sets the Biomol::ControlParameter::PDB_TRUNCATE_LINES parameter of cntnr to trunc. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::hasPDBTruncateLinesParameter (const Base::ControlParameterContainer &cntnr)
	Tells whether cntnr carries an explicit Biomol::ControlParameter::PDB_TRUNCATE_LINES parameter. More...
CDPL_BIOMOL_API void	CDPL::Biomol::clearPDBTruncateLinesParameter (Base::ControlParameterContainer &cntnr)
	Removes the Biomol::ControlParameter::PDB_TRUNCATE_LINES parameter from cntnr. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::getPDBOutputFormalChargesParameter (const Base::ControlParameterContainer &cntnr)
	Returns the value of the Biomol::ControlParameter::PDB_OUTPUT_FORMAL_CHARGES parameter of cntnr. More...
CDPL_BIOMOL_API void	CDPL::Biomol::setPDBOutputFormalChargesParameter (Base::ControlParameterContainer &cntnr, bool output)
	Sets the Biomol::ControlParameter::PDB_OUTPUT_FORMAL_CHARGES parameter of cntnr to output. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::hasPDBOutputFormalChargesParameter (const Base::ControlParameterContainer &cntnr)
	Tells whether cntnr carries an explicit Biomol::ControlParameter::PDB_OUTPUT_FORMAL_CHARGES parameter. More...
CDPL_BIOMOL_API void	CDPL::Biomol::clearPDBOutputFormalChargesParameter (Base::ControlParameterContainer &cntnr)
	Removes the Biomol::ControlParameter::PDB_OUTPUT_FORMAL_CHARGES parameter from cntnr. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::getPDBOutputCONECTRecordsParameter (const Base::ControlParameterContainer &cntnr)
	Returns the value of the Biomol::ControlParameter::PDB_OUTPUT_CONECT_RECORDS parameter of cntnr. More...
CDPL_BIOMOL_API void	CDPL::Biomol::setPDBOutputCONECTRecordsParameter (Base::ControlParameterContainer &cntnr, bool output)
	Sets the Biomol::ControlParameter::PDB_OUTPUT_CONECT_RECORDS parameter of cntnr to output. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::hasPDBOutputCONECTRecordsParameter (const Base::ControlParameterContainer &cntnr)
	Tells whether cntnr carries an explicit Biomol::ControlParameter::PDB_OUTPUT_CONECT_RECORDS parameter. More...
CDPL_BIOMOL_API void	CDPL::Biomol::clearPDBOutputCONECTRecordsParameter (Base::ControlParameterContainer &cntnr)
	Removes the Biomol::ControlParameter::PDB_OUTPUT_CONECT_RECORDS parameter from cntnr. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::getPDBOutputCONECTRecordsForAllBondsParameter (const Base::ControlParameterContainer &cntnr)
	Returns the value of the Biomol::ControlParameter::PDB_OUTPUT_CONECT_RECORDS_FOR_ALL_BONDS parameter of cntnr. More...
CDPL_BIOMOL_API void	CDPL::Biomol::setPDBOutputCONECTRecordsForAllBondsParameter (Base::ControlParameterContainer &cntnr, bool output)
	Sets the Biomol::ControlParameter::PDB_OUTPUT_CONECT_RECORDS_FOR_ALL_BONDS parameter of cntnr to output. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::hasPDBOutputCONECTRecordsForAllBondsParameter (const Base::ControlParameterContainer &cntnr)
	Tells whether cntnr carries an explicit Biomol::ControlParameter::PDB_OUTPUT_CONECT_RECORDS_FOR_ALL_BONDS parameter. More...
CDPL_BIOMOL_API void	CDPL::Biomol::clearPDBOutputCONECTRecordsForAllBondsParameter (Base::ControlParameterContainer &cntnr)
	Removes the Biomol::ControlParameter::PDB_OUTPUT_CONECT_RECORDS_FOR_ALL_BONDS parameter from cntnr. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::getPDBOutputCONECTRecordsReflectingBondOrderParameter (const Base::ControlParameterContainer &cntnr)
	Returns the value of the Biomol::ControlParameter::PDB_OUTPUT_CONECT_RECORDS_REFLECTING_BOND_ORDER parameter of cntnr. More...
CDPL_BIOMOL_API void	CDPL::Biomol::setPDBOutputCONECTRecordsReflectingBondOrderParameter (Base::ControlParameterContainer &cntnr, bool output)
	Sets the Biomol::ControlParameter::PDB_OUTPUT_CONECT_RECORDS_REFLECTING_BOND_ORDER parameter of cntnr to output. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::hasPDBOutputCONECTRecordsReflectingBondOrderParameter (const Base::ControlParameterContainer &cntnr)
	Tells whether cntnr carries an explicit Biomol::ControlParameter::PDB_OUTPUT_CONECT_RECORDS_REFLECTING_BOND_ORDER parameter. More...
CDPL_BIOMOL_API void	CDPL::Biomol::clearPDBOutputCONECTRecordsReflectingBondOrderParameter (Base::ControlParameterContainer &cntnr)
	Removes the Biomol::ControlParameter::PDB_OUTPUT_CONECT_RECORDS_REFLECTING_BOND_ORDER parameter from cntnr. More...
CDPL_BIOMOL_API unsigned int	CDPL::Biomol::getPDBFormatVersionParameter (const Base::ControlParameterContainer &cntnr)
	Returns the value of the Biomol::ControlParameter::PDB_FORMAT_VERSION parameter of cntnr. More...
CDPL_BIOMOL_API void	CDPL::Biomol::setPDBFormatVersionParameter (Base::ControlParameterContainer &cntnr, unsigned int ver)
	Sets the Biomol::ControlParameter::PDB_FORMAT_VERSION parameter of cntnr to ver. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::hasPDBFormatVersionParameter (const Base::ControlParameterContainer &cntnr)
	Tells whether cntnr carries an explicit Biomol::ControlParameter::PDB_FORMAT_VERSION parameter. More...
CDPL_BIOMOL_API void	CDPL::Biomol::clearPDBFormatVersionParameter (Base::ControlParameterContainer &cntnr)
	Removes the Biomol::ControlParameter::PDB_FORMAT_VERSION parameter from cntnr. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::getMMCIFApplyDictAtomBondingParameter (const Base::ControlParameterContainer &cntnr)
	Returns the value of the Biomol::ControlParameter::MMCIF_APPLY_DICT_ATOM_BONDING parameter of cntnr. More...
CDPL_BIOMOL_API void	CDPL::Biomol::setMMCIFApplyDictAtomBondingParameter (Base::ControlParameterContainer &cntnr, bool apply)
	Sets the Biomol::ControlParameter::MMCIF_APPLY_DICT_ATOM_BONDING parameter of cntnr to apply. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::hasMMCIFApplyDictAtomBondingParameter (const Base::ControlParameterContainer &cntnr)
	Tells whether cntnr carries an explicit Biomol::ControlParameter::MMCIF_APPLY_DICT_ATOM_BONDING parameter. More...
CDPL_BIOMOL_API void	CDPL::Biomol::clearMMCIFApplyDictAtomBondingParameter (Base::ControlParameterContainer &cntnr)
	Removes the Biomol::ControlParameter::MMCIF_APPLY_DICT_ATOM_BONDING parameter from cntnr. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::getMMCIFApplyDictBondOrdersParameter (const Base::ControlParameterContainer &cntnr)
	Returns the value of the Biomol::ControlParameter::MMCIF_APPLY_DICT_BOND_ORDERS parameter of cntnr. More...
CDPL_BIOMOL_API void	CDPL::Biomol::setMMCIFApplyDictBondOrdersParameter (Base::ControlParameterContainer &cntnr, bool apply)
	Sets the Biomol::ControlParameter::MMCIF_APPLY_DICT_BOND_ORDERS parameter of cntnr to apply. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::hasMMCIFApplyDictBondOrdersParameter (const Base::ControlParameterContainer &cntnr)
	Tells whether cntnr carries an explicit Biomol::ControlParameter::MMCIF_APPLY_DICT_BOND_ORDERS parameter. More...
CDPL_BIOMOL_API void	CDPL::Biomol::clearMMCIFApplyDictBondOrdersParameter (Base::ControlParameterContainer &cntnr)
	Removes the Biomol::ControlParameter::MMCIF_APPLY_DICT_BOND_ORDERS parameter from cntnr. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::getMMCIFOutputBiopolymersAsChemCompParameter (const Base::ControlParameterContainer &cntnr)
	Returns the value of the Biomol::ControlParameter::MMCIF_OUTPUT_BIOPOLYMERS_AS_CHEM_COMP parameter of cntnr. More...
CDPL_BIOMOL_API void	CDPL::Biomol::setMMCIFOutputBiopolymersAsChemCompParameter (Base::ControlParameterContainer &cntnr, bool output)
	Sets the Biomol::ControlParameter::MMCIF_OUTPUT_BIOPOLYMERS_AS_CHEM_COMP parameter of cntnr to output. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::hasMMCIFOutputBiopolymersAsChemCompParameter (const Base::ControlParameterContainer &cntnr)
	Tells whether cntnr carries an explicit Biomol::ControlParameter::MMCIF_OUTPUT_BIOPOLYMERS_AS_CHEM_COMP parameter. More...
CDPL_BIOMOL_API void	CDPL::Biomol::clearMMCIFOutputBiopolymersAsChemCompParameter (Base::ControlParameterContainer &cntnr)
	Removes the Biomol::ControlParameter::MMCIF_OUTPUT_BIOPOLYMERS_AS_CHEM_COMP parameter from cntnr. More...
CDPL_BIOMOL_API const MMCIFDataProcessingFunction &	CDPL::Biomol::getMMCIFOutputDataPostprocFunctionParameter (const Base::ControlParameterContainer &cntnr)
	Returns the value of the Biomol::ControlParameter::MMCIF_OUTPUT_DATA_POSTPROC_FUNCTION parameter of cntnr. More...
CDPL_BIOMOL_API void	CDPL::Biomol::setMMCIFOutputDataPostprocFunctionParameter (Base::ControlParameterContainer &cntnr, const MMCIFDataProcessingFunction &func)
	Sets the Biomol::ControlParameter::MMCIF_OUTPUT_DATA_POSTPROC_FUNCTION parameter of cntnr to func. More...
CDPL_BIOMOL_API bool	CDPL::Biomol::hasMMCIFOutputDataPostprocFunctionParameter (const Base::ControlParameterContainer &cntnr)
	Tells whether cntnr carries an explicit Biomol::ControlParameter::MMCIF_OUTPUT_DATA_POSTPROC_FUNCTION parameter. More...
CDPL_BIOMOL_API void	CDPL::Biomol::clearMMCIFOutputDataPostprocFunctionParameter (Base::ControlParameterContainer &cntnr)
	Removes the Biomol::ControlParameter::MMCIF_OUTPUT_DATA_POSTPROC_FUNCTION parameter from cntnr. More...

Detailed Description

Declaration of convenience functions for control-parameter handling.