Chemical Data Processing Library C++ API - Version 1.4.0
Chem/AtomProperty.hpp
Go to the documentation of this file.
1 /*
2  * AtomProperty.hpp
3  *
4  * This file is part of the Chemical Data Processing Toolkit
5  *
6  * Copyright (C) 2003 Thomas Seidel <thomas.seidel@univie.ac.at>
7  *
8  * This library is free software; you can redistribute it and/or
9  * modify it under the terms of the GNU Lesser General Public
10  * License as published by the Free Software Foundation; either
11  * version 2 of the License, or (at your option) any later version.
12  *
13  * This library is distributed in the hope that it will be useful,
14  * but WITHOUT ANY WARRANTY; without even the implied warranty of
15  * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
16  * Lesser General Public License for more details.
17  *
18  * You should have received a copy of the GNU Lesser General Public License
19  * along with this library; see the file COPYING. If not, write to
20  * the Free Software Foundation, Inc., 59 Temple Place - Suite 330,
21  * Boston, MA 02111-1307, USA.
22  */
23 
29 #ifndef CDPL_CHEM_ATOMPROPERTY_HPP
30 #define CDPL_CHEM_ATOMPROPERTY_HPP
31 
32 #include "CDPL/Chem/APIPrefix.hpp"
33 
34 
35 namespace CDPL
36 {
37 
38  namespace Base
39  {
40 
41  class LookupKey;
42  }
43 
44  namespace Chem
45  {
46 
50  namespace AtomProperty
51  {
52 
58  extern CDPL_CHEM_API const Base::LookupKey NAME;
59 
66 
72  extern CDPL_CHEM_API const Base::LookupKey TYPE;
73 
80 
87 
94 
101 
108 
115 
122 
129 
136 
143 
150 
157 
164 
171 
178 
185 
192 
199 
206 
213 
220 
227 
234 
241 
248 
255 
262 
269 
276 
283 
290 
297  } // namespace AtomProperty
298  } // namespace Chem
299 } // namespace CDPL
300 
301 #endif // CDPL_CHEM_ATOMPROPERTY_HPP
Definition of the preprocessor macro CDPL_CHEM_API.
#define CDPL_CHEM_API
Tells the compiler/linker which classes, functions and variables are part of the library API.
An unique lookup key for control-parameter and property values.
Definition: LookupKey.hpp:54
CDPL_CHEM_API const Base::LookupKey MOL2_SUBSTRUCTURE_NAME
Specifies the name of the substructure the atom belongs to (as read from or written to a Sybyl MOL2 f...
CDPL_CHEM_API const Base::LookupKey CIP_PRIORITY
Specifies the CIP priority of the atom.
CDPL_CHEM_API const Base::LookupKey ISOTOPE
Specifies the isotopic mass number of the atom.
CDPL_CHEM_API const Base::LookupKey MATCH_EXPRESSION
Specifies the substructure matching expression associated with the atom.
CDPL_CHEM_API const Base::LookupKey SYBYL_TYPE
Specifies the SYBYL atom type (see namespace Chem::SybylAtomType).
CDPL_CHEM_API const Base::LookupKey MATCH_EXPRESSION_STRING
Specifies a string representation of the substructure matching expression associated with the atom.
CDPL_CHEM_API const Base::LookupKey NAME
Specifies the name of the atom.
CDPL_CHEM_API const Base::LookupKey SYMMETRY_CLASS
Specifies the topological symmetry class of the atom.
CDPL_CHEM_API const Base::LookupKey AROMATICITY_FLAG
Specifies whether the atom is a member of an aromatic ring system.
CDPL_CHEM_API const Base::LookupKey MOL2_NAME
Specifies the atom name as read from or written to a Sybyl MOL2 file.
CDPL_CHEM_API const Base::LookupKey UNPAIRED_ELECTRON_COUNT
Specifies the number of unpaired electrons of the atom.
CDPL_CHEM_API const Base::LookupKey RING_FLAG
Specifies whether the atom is a member of any ring.
CDPL_CHEM_API const Base::LookupKey MATCH_CONSTRAINTS
Specifies the substructure matching constraints associated with the atom.
CDPL_CHEM_API const Base::LookupKey MOL2_CHARGE
Specifies the atomic partial charge as read from or written to a Sybyl MOL2 file.
CDPL_CHEM_API const Base::LookupKey ATOM_MAPPING_ID
Specifies the atom-atom mapping ID used to relate reactant atoms to product atoms in a reaction.
CDPL_CHEM_API const Base::LookupKey FORMAL_CHARGE
Specifies the formal charge of the atom.
CDPL_CHEM_API const Base::LookupKey MDL_DB_STEREO_CARE_FLAG
Specifies the value of the MDL stereo care flag of the atom.
CDPL_CHEM_API const Base::LookupKey MOL2_SUBSTRUCTURE_ID
Specifies the ID of the substructure the atom belongs to (as read from or written to a Sybyl MOL2 fil...
CDPL_CHEM_API const Base::LookupKey CIP_CONFIGURATION
Specifies the CIP stereochemical configuration label of the atom (see namespace Chem::CIPDescriptor).
CDPL_CHEM_API const Base::LookupKey TYPE
Specifies the atom type (see namespace Chem::AtomType).
CDPL_CHEM_API const Base::LookupKey MDL_PARITY
Specifies the MDL stereo parity of the atom (see namespace Chem::MDLParity).
CDPL_CHEM_API const Base::LookupKey STEREO_DESCRIPTOR
Specifies the stereochemical descriptor of the atom.
CDPL_CHEM_API const Base::LookupKey COORDINATES_3D_ARRAY
Specifies an array with the 3D coordinates of the atom for one or more molecular conformations.
CDPL_CHEM_API const Base::LookupKey MOL2_SUBSTRUCTURE_SUBTYPE
Specifies the subtype of the substructure the atom belongs to (as read from or written to a Sybyl MOL...
CDPL_CHEM_API const Base::LookupKey MOL2_SUBSTRUCTURE_CHAIN
Specifies the chain identifier of the substructure the atom belongs to (as read from or written to a ...
CDPL_CHEM_API const Base::LookupKey REACTION_CENTER_STATUS
Specifies the reaction center status of the atom (see namespace Chem::ReactionCenterStatus).
CDPL_CHEM_API const Base::LookupKey COMPONENT_GROUP_ID
Specifies the ID of the component group the atom belongs to.
CDPL_CHEM_API const Base::LookupKey IMPLICIT_HYDROGEN_COUNT
Specifies the number of implicit hydrogens attached to the atom.
CDPL_CHEM_API const Base::LookupKey RADICAL_TYPE
Specifies the radical type of the atom (see namespace Chem::RadicalType).
CDPL_CHEM_API const Base::LookupKey HYBRIDIZATION
Specifies the hybridization state of the atom (see namespace Chem::HybridizationState).
CDPL_CHEM_API const Base::LookupKey CANONICAL_NUMBER
Specifies the canonical numbering of the atom.
CDPL_CHEM_API const Base::LookupKey MORGAN_NUMBER
Specifies the Morgan extended connectivity value of the atom.
CDPL_CHEM_API const Base::LookupKey SYMBOL
Specifies the element symbol of the atom.
CDPL_CHEM_API const Base::LookupKey STEREO_CENTER_FLAG
Specifies whether the atom is a stereogenic center.
CDPL_CHEM_API const Base::LookupKey COORDINATES_2D
Specifies the 2D coordinates of the atom.
The namespace of the Chemical Data Processing Library.