Chemical Data Processing Library C++ API - Version 1.4.0
BindingAffinityCalculator.hpp
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1 /*
2  * BindingAffinityCalculator.hpp
3  *
4  * This file is part of the Chemical Data Processing Toolkit
5  *
6  * Copyright (C) 2003 Thomas Seidel <thomas.seidel@univie.ac.at>
7  *
8  * This library is free software; you can redistribute it and/or
9  * modify it under the terms of the GNU Lesser General Public
10  * License as published by the Free Software Foundation; either
11  * version 2 of the License, or (at your option) any later version.
12  *
13  * This library is distributed in the hope that it will be useful,
14  * but WITHOUT ANY WARRANTY; without even the implied warranty of
15  * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
16  * Lesser General Public License for more details.
17  *
18  * You should have received a copy of the GNU Lesser General Public License
19  * along with this library; see the file COPYING. If not, write to
20  * the Free Software Foundation, Inc., 59 Temple Place - Suite 330,
21  * Boston, MA 02111-1307, USA.
22  */
23 
29 #ifndef CDPL_GRAIL_BINDINGAFFINITYCALCULATOR_HPP
30 #define CDPL_GRAIL_BINDINGAFFINITYCALCULATOR_HPP
31 
32 #include "CDPL/GRAIL/APIPrefix.hpp"
33 #include "CDPL/Math/Vector.hpp"
34 
35 
36 namespace CDPL
37 {
38 
39  namespace GRAIL
40  {
41 
51  {
52 
53  public:
58  {
59 
63  PKD,
64 
68  PKI,
69 
73  PKD_PKI
74  };
75 
80 
87  double operator()(const Math::DVector& grail_descr, AffinityMeasure measure) const;
88  };
89  } // namespace GRAIL
90 } // namespace CDPL
91 
92 #endif // CDPL_GRAIL_BINDINGAFFINITYCALCULATOR_HPP
Definition of the preprocessor macro CDPL_GRAIL_API.
#define CDPL_GRAIL_API
Tells the compiler/linker which classes, functions and variables are part of the library API.
Definition of vector data types.
Predicts the binding affinity of a ligand pose from its GRAIL descriptor vector.
Definition: BindingAffinityCalculator.hpp:51
BindingAffinityCalculator()
Constructs the BindingAffinityCalculator instance.
Definition: BindingAffinityCalculator.hpp:79
double operator()(const Math::DVector &grail_descr, AffinityMeasure measure) const
Predicts the binding affinity from the given GRAIL descriptor.
AffinityMeasure
Specifies the affinity measure the prediction targets.
Definition: BindingAffinityCalculator.hpp:58
@ PKI
(inhibition constant).
Definition: BindingAffinityCalculator.hpp:68
@ PKD
(dissociation constant).
Definition: BindingAffinityCalculator.hpp:63
The namespace of the Chemical Data Processing Library.