Chemical Data Processing Library C++ API - Version 1.1.1
Biomol/ControlParameterDefault.hpp
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1 /*
2  * ControlParameterDefault.hpp
3  *
4  * This file is part of the Chemical Data Processing Toolkit
5  *
6  * Copyright (C) 2003 Thomas Seidel <thomas.seidel@univie.ac.at>
7  *
8  * This library is free software; you can redistribute it and/or
9  * modify it under the terms of the GNU Lesser General Public
10  * License as published by the Free Software Foundation; either
11  * version 2 of the License, or (at your option) any later version.
12  *
13  * This library is distributed in the hope that it will be useful,
14  * but WITHOUT ANY WARRANTY; without even the implied warranty of
15  * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
16  * Lesser General Public License for more details.
17  *
18  * You should have received a copy of the GNU Lesser General Public License
19  * along with this library; see the file COPYING. If not, write to
20  * the Free Software Foundation, Inc., 59 Temple Place - Suite 330,
21  * Boston, MA 02111-1307, USA.
22  */
23 
29 #ifndef CDPL_BIOMOL_CONTROLPARAMETERDEFAULT_HPP
30 #define CDPL_BIOMOL_CONTROLPARAMETERDEFAULT_HPP
31 
32 #include <cstddef>
33 
36 
37 
38 namespace CDPL
39 {
40 
41  namespace Biomol
42  {
43 
47  namespace ControlParameterDefault
48  {
49 
53  extern CDPL_BIOMOL_API const bool STRICT_ERROR_CHECKING;
54 
58  extern CDPL_BIOMOL_API const bool CHECK_LINE_LENGTH;
59 
61 
63 
65 
67 
69 
71 
73 
75 
77 
79 
81 
83 
85 
86  extern CDPL_BIOMOL_API const bool PDB_TRUNCATE_LINES;
87 
88  extern CDPL_BIOMOL_API const bool PDB_WRITE_FORMAL_CHARGES;
89 
90  extern CDPL_BIOMOL_API const bool PDB_WRITE_CONECT_RECORDS;
91 
93 
95 
96  extern CDPL_BIOMOL_API const unsigned int PDB_FORMAT_VERSION;
97 
99  } // namespace ControlParameterDefault
100  } // namespace Biomol
101 } // namespace CDPL
102 
103 #endif // CDPL_BIOMOL_CONTROLPARAMETERDEFAULT_HPP
CDPL::Biomol::ControlParameterDefault::COMBINE_INTERFERING_RESIDUE_COORDINATES
CDPL_BIOMOL_API const bool COMBINE_INTERFERING_RESIDUE_COORDINATES
CDPL::Biomol::ControlParameterDefault::PDB_APPLY_DICT_ATOM_BONDING_TO_STD_RESIDUES
CDPL_BIOMOL_API const bool PDB_APPLY_DICT_ATOM_BONDING_TO_STD_RESIDUES
CDPL::Biomol::ControlParameterDefault::PDB_APPLY_DICT_FORMAL_ATOM_CHARGES
CDPL_BIOMOL_API const bool PDB_APPLY_DICT_FORMAL_ATOM_CHARGES
CDPL::Biomol::ControlParameterDefault::PDB_APPLY_DICT_BOND_ORDERS_TO_STD_RESIDUES
CDPL_BIOMOL_API const bool PDB_APPLY_DICT_BOND_ORDERS_TO_STD_RESIDUES
CDPL::Biomol::ControlParameterDefault::PDB_CALC_MISSING_FORMAL_CHARGES
CDPL_BIOMOL_API const bool PDB_CALC_MISSING_FORMAL_CHARGES
CDPL::Biomol::ControlParameterDefault::STRICT_ERROR_CHECKING
CDPL_BIOMOL_API const bool STRICT_ERROR_CHECKING
Default setting (= false) for the control-parameter Biomol::ControlParameter::STRICT_ERROR_CHECKING.
CDPL::Biomol::ControlParameterDefault::PDB_APPLY_DICT_ATOM_BONDING_TO_NON_STD_RESIDUES
CDPL_BIOMOL_API const bool PDB_APPLY_DICT_ATOM_BONDING_TO_NON_STD_RESIDUES
CDPL::Biomol::ControlParameterDefault::PDB_WRITE_FORMAL_CHARGES
CDPL_BIOMOL_API const bool PDB_WRITE_FORMAL_CHARGES
CDPL::Biomol::ControlParameterDefault::PDB_RESIDUE_DICTIONARY
CDPL_BIOMOL_API const ResidueDictionary::SharedPointer PDB_RESIDUE_DICTIONARY
CDPL::Biomol::ControlParameterDefault::PDB_IGNORE_CONECT_RECORDS
CDPL_BIOMOL_API const bool PDB_IGNORE_CONECT_RECORDS
CDPL::Biomol::ControlParameterDefault::PDB_WRITE_CONECT_RECORDS_REFLECTING_BOND_ORDER
CDPL_BIOMOL_API const bool PDB_WRITE_CONECT_RECORDS_REFLECTING_BOND_ORDER
CDPL::Biomol::ControlParameterDefault::PDB_PERCEIVE_MISSING_BOND_ORDERS
CDPL_BIOMOL_API const bool PDB_PERCEIVE_MISSING_BOND_ORDERS
APIPrefix.hpp
Definition of the preprocessor macro CDPL_BIOMOL_API.
CDPL
The namespace of the Chemical Data Processing Library.
CDPL::Biomol::ControlParameterDefault::PDB_DEDUCE_BOND_ORDERS_FROM_CONECT_RECORDS
CDPL_BIOMOL_API const bool PDB_DEDUCE_BOND_ORDERS_FROM_CONECT_RECORDS
CDPL::Biomol::ControlParameterDefault::PDB_IGNORE_FORMAL_CHARGE_FIELD
CDPL_BIOMOL_API const bool PDB_IGNORE_FORMAL_CHARGE_FIELD
CDPL::Biomol::ControlParameterDefault::CHECK_LINE_LENGTH
CDPL_BIOMOL_API const bool CHECK_LINE_LENGTH
Default setting (= false) for the control-parameter Biomol::ControlParameter::CHECK_LINE_LENGTH.
CDPL::Biomol::ResidueDictionary::SharedPointer
std::shared_ptr< ResidueDictionary > SharedPointer
Definition: ResidueDictionary.hpp:96
ResidueDictionary.hpp
Definition of the class CDPL::Biomol::ResidueDictionary.
CDPL::Biomol::ControlParameterDefault::PDB_APPLY_DICT_ATOM_TYPES
CDPL_BIOMOL_API const bool PDB_APPLY_DICT_ATOM_TYPES
CDPL_BIOMOL_API
#define CDPL_BIOMOL_API
Tells the compiler/linker which classes, functions and variables are part of the library API.
CDPL::Biomol::ControlParameterDefault::PDB_WRITE_CONECT_RECORDS_FOR_ALL_BONDS
CDPL_BIOMOL_API const bool PDB_WRITE_CONECT_RECORDS_FOR_ALL_BONDS
CDPL::Biomol::ControlParameterDefault::PDB_WRITE_CONECT_RECORDS
CDPL_BIOMOL_API const bool PDB_WRITE_CONECT_RECORDS
CDPL::Biomol::ControlParameterDefault::PDB_FORMAT_VERSION
CDPL_BIOMOL_API const unsigned int PDB_FORMAT_VERSION
CDPL::Biomol::ControlParameterDefault::PDB_TRUNCATE_LINES
CDPL_BIOMOL_API const bool PDB_TRUNCATE_LINES
CDPL::Biomol::ControlParameterDefault::PDB_APPLY_DICT_BOND_ORDERS_TO_NON_STD_RESIDUES
CDPL_BIOMOL_API const bool PDB_APPLY_DICT_BOND_ORDERS_TO_NON_STD_RESIDUES
CDPL::Biomol::ControlParameterDefault::PDB_EVALUATE_MASTER_RECORD
CDPL_BIOMOL_API const bool PDB_EVALUATE_MASTER_RECORD